Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g00093 | ATGGAATCCTCTTATTTTTCGTTTTCCGATTCGGATTTCTCGACGGAATCTTCATTCGGATCAGCGGAATCATCGTTCTCATGGAGTGAGTTTTTCTCGATTCACAGTACCCTAGAAAACTCAATCTCACTACACGGAGAATTTCTCGGGAATCAAACATCGGAATCGGAATCGAAAATTGTAGTGAAGGAAGAAACCGAAGTGAGTTCGATTGATTTCGAGGAGGAGAAAGAAAGGAAGACAACGGAGAAGAGTTACAGAGGAGTGAGACGGCGGCCGTGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGATAGCGCTGAAGCTGCGGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAGCAATGGCGGTGCTGAATTTTCCGGTGGAAATGGTGAGGGAATCACTGAAGGATATTAAGTATCAACTGGAAGAAGGATGTTCGCCGGTGGTGGCTTTGAAGAGGAAACACTCAATGAGAAGGAAATCGGCGGCGGCGGCGGTGAAAAGCCAAGGGGCGGCGGAGAAGAAGAAGATGAAGAAAAACAACAATGTGGTGATTTTAGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGCTAAGTTCATGA | 660 | 46.06 | MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKIVVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAAAAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1058226 | 1058885 | + | ClCG07G001000.1 | Cla07g00093 | 276081 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g00093 | 219 | ProSiteProfiles | AP2/ERF domain profile. | 85 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g00093 | 219 | PRINTS | Ethylene responsive element binding protein signature | 86 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g00093 | 219 | PRINTS | Ethylene responsive element binding protein signature | 109 | 125 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g00093 | 219 | SMART | rav1_2 | 85 | 149 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g00093 | 219 | CDD | AP2 | 86 | 144 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g00093 | 219 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cla07g00093 | 219 | SUPERFAMILY | DNA-binding domain | 85 | 145 | IPR016177 | GO:0003677 | |
Cla07g00093 | 219 | PANTHER | DNA-BINDING DOMAIN | 45 | 217 | IPR044808 | GO:0003700|GO:0009873 | |
Cla07g00093 | 219 | Gene3D | AP2/ERF domain | 84 | 145 | IPR036955 | GO:0003700|GO:0006355 | |
Cla07g00093 | 219 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B | 45 | 217 | - | - | |
Cla07g00093 | 219 | Pfam | AP2 domain | 85 | 135 | IPR001471 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla07g00093 | Cla09g00720 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00093 | Cla-Chr7:1058226 | Cla09g00720 | Cla-Chr9:7074746 | 1.92E-47 | dispersed | |
Cla05g00451 | Cla-Chr5:4029809 | Cla07g00093 | Cla-Chr7:1058226 | 1.53E-49 | wgd | |
Cla06g00659 | Cla-Chr6:8186126 | Cla07g00093 | Cla-Chr7:1058226 | 1.93E-46 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61364 | PF00847 | AP2 | 1.20E-14 | CL0081 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g00093 | K14516 | - | csv:101220325 | 295.819 |