Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00129 ATGGCGAAAAAGAGGATGAAGTCGATAACCCAGATTTTGTTTTGTGCGTTTTTGTACTGTTGTATTGGTTTTTACACTGAGTGTTCTGCTTCTGGGTTTAGTGAAGAAGCATTAGCATTGGTTTCGATTAAATCAGGGCTTGTTGATCCATTGAAATGGCTCAGAGATTGGAAGTTGAGCGATGGAAATGGTGAGTTTGCAAAGCACTGTAATTGGACTGGAGTTTTTTGCAACTCAGATGGAGCTGTTGAGAAACTGAGCCTTTCTCGTATGAATCTCAGCGGCATTTTGTCGAACGACTTGCAAAGATTAACAAAGCTTACTTCTCTTGACTTGAGCGGCAATGGATTTTCGTCTTCTTTGCCAAAATCCATTGGCAATCTCACTTCCCTGAAGAGTTTTGATGTGAGTCAAAACTATTTCGTCGGTGAAATTCCGATGGGGTTTGGAGGGATGGTTGGATTGACGAATTTCAATGCCTCAAGCAACAATTTCTCTGGTTTTATCCCTGAGGATCTTGGAAATGCAACTCTGCTGGAGATTTTGGATCTCCGGGGGAGTTTTCTTGAAGGGTCAATTCCCATATCTTTCAAGAACTTGCAGAAGTTGAAGTTTCTTGGACTTTCTGGGAACAATCTGACCGGTCGAATCCCGACCGAGATTGGTCAGATGTCGTCGTTAGAGACTGTTATTATTGGATACAACGAGTTTGAAGGAGGGATTCCATCAGAATTTGGGAATCTCACTAATCTGAAGTATCTTGATTTGGCTGTGGGAAAACTTGGTGGTGGGATTCCTGCTGAGCTTGGGAGGCTTAAACAACTTGAGACGTTGTTCCTTTATAAGAACGAATTCGAAGATCGAATTCCGTCGTCGATTGGCAATGTTACTTCATTAGTGTTTCTTGATCTTTCAGACAACAAGTTAACAGGGGAGATTCCAGCTGAGGTTGCTGAACTGAAGAACTTGCAGCTGCTGAATTTGATGTGTAACAAGCTGTCTGGTGAAGTGCCTCCAGGAATAGGGGGGCTGACGAAATTGCAGGTTCTAGAGCTCTGGAACAACTCTTTGTCGGGCCAATTGCCTGGCGATCTTGGCAAGAACTCAGAGTTGGTATGGTTGGATGTCTCATCCAATTCATTCTCTGGTCCAATTCCTGCTTCTTTATGTAATAGAGGCAATCTAACCAAGCTCATCCTTTTCAACAATGCCTTTTCGGGTTCGATTCCGATTGGATTGTCATCATGTTACTCGCTTGTTCGTGTTCGAATGCAGAATAATCTCCTTTCTGGTACAATTCCAGTTGGTTTTGGAAAGCTTGGGAAGCTTCAGAGGCTAGAATTAGCAAACAACAGTCTCTTTGGTAGTATCCCAAGTGATATTTCGTCTTCTAAGTCCCTTTCTTTTATTGATCTCTCTGAAAATGACCTCCATTCTTCTCTTCCTTCCTCAATTCTTTCCATTCCAAATCTTCAAACTTTTATAGTCTCTGACAATAACTTAGAAGGTGAAATCCCAGATCAGTTTCAGGAATGTCCTGCACTTTCCCTTCTTGATCTCTCTTCAAACCATTTCACAGGAAGCATTCCAGAAAGCATTGCTTCATGTGAGAGATTGGTAAATCTGAATCTTAGAAACAACCAGTTTACTGGAGAAATCCCAAAACAGATTGCAAATATGCCTTCATTGTCTGTCCTGGATCTATCCAACAACTCTCTTACTGGTAGAATACCCGATAATTTCGGTATCTCTCCGGCACTTGAATCTCTTAATGTATCATACAATAAGCTTGAGGGTCCAGTGCCATTAAATGGTGTTTTAAGAACAATCAATCCAAGTGATCTTCAGGGCAATGCTGGTTTATGTGGAGCAGTCCTACCCCCATGTTCACCAAATTCAGCATTTACATCAGGGCACGGGAACTCGCACACGTCACACATTATCGCTAGTTGGGTCATTGGAGTATCTGGATTTTTAGCAATCTGCATCACTCTTTTCGGTGTTCGATCGTTGTACAAGAGGTGGTACTCAAGCGGAAGTTGCTTTGAAGGGAGATATGAAATGGGTGGGGGAGATTGGCCATGGAGATTGATGGCATTCCAAAGGCTTGGATTCACAAGCAGTGACATTTTGACTTGCATCAAGGAATCAAATGTAATTGGAATGGGAGCAACTGGGATTGTGTATAAAGCTGAAATGCCACAACTAAAGACAGTTGTGGCAGTCAAAAAGCTGTGGAGATCACAACCAGATCTTGAAATTGGAAGTAGTGAAGGTCTAGTAGGAGAAGTGAATTTGCTGGGAAAGTTAAGGCACAGGAACATAGTTCGTTTACTCGGATTTATGCATAACGATGTCGATGTAATGATCATCTATGAGTTTATGCAAAATGGGAGCCTTGGAGAAGCCTTACATGGCAAACAAGCAGGGAGGATGCTTGTAGACTGGGTTTCAAGATACAACATAGCAATTGGAGTTGCACAAGGGTTAGCTTATCTCCATCACGATTGCAACCCACCCATCATTCATCGCGACGTTAAGCCAAATAATATACTTCTCGATTCAAATCTCGAGGCACGGTTAGCTGATTTTGGTTTGGCACGGATGATGGCTCGAAAGAACGAGACGGTTTCAATGGTAGCTGGATCCTACGGCTACATTGCCCCCGAATATGGATACACTTTAAAGGTGGATGAAAAGATTGACATTTACAGCTATGGCGTCGTTCTTTTAGAGCTACTGACAGGGAAGAAGCCATTAGATACCGAGTTCGGGGAATCTGTGGACATTGTTGAATGGATAAAAAGGAAAGTTAGGGACAATAGGCCTTTAGAAGAAGCATTAGATCCCCATCTGGGAAATTTCAAGCACGTTCAAGAAGAAATGCTGTTTGTTCTTAGAATAGCACTTCTCTGCACTGCAAAGCATCCAAAAGACAGACCCTCCATGAGAGATATAATAACAATGCTTGGAGAAGCAAAACCAAGGAGAAAAAGCAACAGTGGCAATGAAGGATTCGGAACTAACAAAGAGAAGCCAGTTTTCAGCACTTCACCTGTAAATGGCCTTCTGTAG 3075 42.37 MAKKRMKSITQILFCAFLYCCIGFYTECSASGFSEEALALVSIKSGLVDPLKWLRDWKLSDGNGEFAKHCNWTGVFCNSDGAVEKLSLSRMNLSGILSNDLQRLTKLTSLDLSGNGFSSSLPKSIGNLTSLKSFDVSQNYFVGEIPMGFGGMVGLTNFNASSNNFSGFIPEDLGNATLLEILDLRGSFLEGSIPISFKNLQKLKFLGLSGNNLTGRIPTEIGQMSSLETVIIGYNEFEGGIPSEFGNLTNLKYLDLAVGKLGGGIPAELGRLKQLETLFLYKNEFEDRIPSSIGNVTSLVFLDLSDNKLTGEIPAEVAELKNLQLLNLMCNKLSGEVPPGIGGLTKLQVLELWNNSLSGQLPGDLGKNSELVWLDVSSNSFSGPIPASLCNRGNLTKLILFNNAFSGSIPIGLSSCYSLVRVRMQNNLLSGTIPVGFGKLGKLQRLELANNSLFGSIPSDISSSKSLSFIDLSENDLHSSLPSSILSIPNLQTFIVSDNNLEGEIPDQFQECPALSLLDLSSNHFTGSIPESIASCERLVNLNLRNNQFTGEIPKQIANMPSLSVLDLSNNSLTGRIPDNFGISPALESLNVSYNKLEGPVPLNGVLRTINPSDLQGNAGLCGAVLPPCSPNSAFTSGHGNSHTSHIIASWVIGVSGFLAICITLFGVRSLYKRWYSSGSCFEGRYEMGGGDWPWRLMAFQRLGFTSSDILTCIKESNVIGMGATGIVYKAEMPQLKTVVAVKKLWRSQPDLEIGSSEGLVGEVNLLGKLRHRNIVRLLGFMHNDVDVMIIYEFMQNGSLGEALHGKQAGRMLVDWVSRYNIAIGVAQGLAYLHHDCNPPIIHRDVKPNNILLDSNLEARLADFGLARMMARKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKKPLDTEFGESVDIVEWIKRKVRDNRPLEEALDPHLGNFKHVQEEMLFVLRIALLCTAKHPKDRPSMRDIITMLGEAKPRRKSNSGNEGFGTNKEKPVFSTSPVNGLL 1024
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1471542 1475428 - ClCG07G001400.1 Cla07g00129 276117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00129 1024 Gene3D Ribonuclease Inhibitor 154 263 IPR032675 -
Cla07g00129 1024 MobiDBLite consensus disorder prediction 1001 1024 - -
Cla07g00129 1024 Gene3D Transferase(Phosphotransferase) domain 1 799 1004 - -
Cla07g00129 1024 MobiDBLite consensus disorder prediction 991 1024 - -
Cla07g00129 1024 Gene3D Ribonuclease Inhibitor 264 364 IPR032675 -
Cla07g00129 1024 Gene3D Ribonuclease Inhibitor 35 153 IPR032675 -
Cla07g00129 1024 SMART serkin_6 714 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00129 1024 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 1004 - -
Cla07g00129 1024 Pfam Protein kinase domain 716 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00129 1024 ProSiteProfiles Protein kinase domain profile. 714 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00129 1024 SUPERFAMILY RNI-like 85 391 - -
Cla07g00129 1024 Pfam Leucine Rich repeat 105 118 IPR001611 GO:0005515
Cla07g00129 1024 Pfam Leucine Rich Repeat 563 581 IPR001611 GO:0005515
Cla07g00129 1024 Gene3D Phosphorylase Kinase; domain 1 713 798 - -
Cla07g00129 1024 PRINTS Leucine-rich repeat signature 299 312 - -
Cla07g00129 1024 PRINTS Leucine-rich repeat signature 560 573 - -
Cla07g00129 1024 SUPERFAMILY Protein kinase-like (PK-like) 711 990 IPR011009 -
Cla07g00129 1024 PANTHER UNNAMED PRODUCT 15 1004 - -
Cla07g00129 1024 ProSitePatterns Protein kinases ATP-binding region signature. 720 744 IPR017441 GO:0005524
Cla07g00129 1024 Gene3D Ribonuclease Inhibitor 374 633 IPR032675 -
Cla07g00129 1024 Pfam Leucine rich repeat 489 549 IPR001611 GO:0005515
Cla07g00129 1024 SUPERFAMILY RNI-like 289 599 - -
Cla07g00129 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Cla07g00129 1024 Pfam Leucine rich repeat N-terminal domain 35 78 IPR013210 -
Cla07g00129 1024 SMART LRR_typ_2 272 295 IPR003591 -
Cla07g00129 1024 SMART LRR_typ_2 560 584 IPR003591 -
Cla07g00129 1024 SMART LRR_typ_2 104 128 IPR003591 -
Cla07g00129 1024 SMART LRR_typ_2 200 224 IPR003591 -
Cla07g00129 1024 SMART LRR_typ_2 296 320 IPR003591 -
Cla07g00129 1024 SMART LRR_typ_2 440 464 IPR003591 -
Cla07g00129 1024 SMART LRR_typ_2 344 368 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01712 Cla-Chr6:30677277 Cla07g00129 Cla-Chr7:1471542 3.53E-10 dispersed
Cla07g00129 Cla-Chr7:1471542 Cla07g01604 Cla-Chr7:33359458 0 dispersed
Cla07g00129 Cla-Chr7:1471542 Cla01g01761 Cla-Chr1:32517304 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80668 PF00069 Pkinase 1.90E-47 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00129 - - csv:101222597 1914.43