Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g00216 | ATGGAGCGAAATTACCCGTATGAGAATGGAGTGATGATGACGAGAGACCCGAAACCAAGGCTGAGATGGACTGCTGATCTTCACGACCGTTTTGTAGACGCGGTCACCAAGCTTGGTGGCCCTGAAAAAGCAACTCCCAAGTCTGTCTTAAGATTGATGGGTTTAAAGGGCTTGACTTTGTACCACTTGAAGAGCCATTTGCAGAAATATAGACTTGGACTGCAAACTCGAAAGCAAAATGTGGCTGAGCAAAAGAATGAAAGCAGTGGGACTCTTAGCAATTTCACCGGTGTAGAGGAAGATGACAGAGGGATGCAAATTGCCGAGGCTCTAAAATCACATGTCGAAGTGCAGAAAACAATACTAGAACAACTAGAGGTACAAAATAAACTACAAATGAGAATAGAGGCTCAAGGAAAATACTTGCAAGATATCTTAGAGAAAGCACAAAAGAGTCTGGCACTCGCCATTGGCAGTAACCTTGGTAGTATTGAAAGCACAGGAATGCAGTTAATGAACTTTGATGCGGCTCTGTCAGATCAAATTGAAAAATTTAAGAAACAAGAAATGAGAGGAGGCATAGCAGACGTAAATGGTGTTTGTAAGAAGACCAATGATTCACTCATCCAGATATGCAAAGTGGAGGCTGGAGAAGAAGCTACAATAAACGAGTTTAATGTTGAAAAGAATATGATCAACTTTGATTTGAATTCCAAAGGCGGCTATGATTACAGTGCAAATGCGGCTGAAATACTTGACGCCAAAGTACTTCCTTGTTCAAGAGTTTGTCAAGCAACCATTGAAGAATATGTGATAAATTGTTTCACTCCAGCCAGCTATGCCAAGTCCCTATCAGCATTTGCCACTTGCCTCTATTCACATATGAATGAGGAATTTCAGAAGGTTGAAATACCATAA | 918 | 41.07 | MERNYPYENGVMMTRDPKPRLRWTADLHDRFVDAVTKLGGPEKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGLQTRKQNVAEQKNESSGTLSNFTGVEEDDRGMQIAEALKSHVEVQKTILEQLEVQNKLQMRIEAQGKYLQDILEKAQKSLALAIGSNLGSIESTGMQLMNFDAALSDQIEKFKKQEMRGGIADVNGVCKKTNDSLIQICKVEAGEEATINEFNVEKNMINFDLNSKGGYDYSANAAEILDAKVLPCSRVCQATIEEYVINCFTPASYAKSLSAFATCLYSHMNEEFQKVEIP | 305 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2352358 | 2356712 | + | ClCG07G002310.1 | Cla07g00216 | 276204 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g00216 | 305 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 15 | 75 | IPR017930 | - | |
Cla07g00216 | 305 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 8 | 247 | IPR044848 | GO:0003700 | |
Cla07g00216 | 305 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 8 | 247 | - | - | |
Cla07g00216 | 305 | Gene3D | - | 17 | 74 | - | - | |
Cla07g00216 | 305 | Pfam | Myb-like DNA-binding domain | 21 | 71 | IPR001005 | - | |
Cla07g00216 | 305 | SUPERFAMILY | Homeodomain-like | 18 | 75 | IPR009057 | - | |
Cla07g00216 | 305 | Pfam | MYB-CC type transfactor, LHEQLE motif | 105 | 152 | IPR025756 | - | |
Cla07g00216 | 305 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 18 | 72 | IPR006447 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00216 | Cla-Chr7:2352358 | Cla10g01268 | Cla-Chr10:27482619 | 5.92E-48 | dispersed | |
Cla07g00216 | Cla-Chr7:2352358 | Cla09g02227 | Cla-Chr9:39854007 | 9.10E-50 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61373 | PF00249 | Myb_DNA-binding | 3.50E-07 | CL0123 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g00216 | - | - | csv:101219098 | 466.848 |