Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00225 ATGTCCCTCCTTAGTAGATTCTTTTACCGAAGACCCCCAGATGGGTTGCTGGAATTTGTTGAACGAGTATATATTTTTGATTCGTGCTTTTCAACTGAAGTATTGCCCGATGGTATGTACCAAATATATCTGCACGAAATCATAAACGAATTACATGAAGAATTCCCGGATTCCTCCTTTCTTGCATTTAATTTTCGTGAAGGGGAGAATAGGAGCCAATTTTCAGAAATGTTGTGCGAGTATGATGTCACTGTGATGGATTATCCTCGACAATACGAAGGTTGCCCTCTTCTTCCATTGTCGTTGATACAGCATTTCCTCCGTGTCTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATGTCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTAGCATTCCTTTTGGCTAGCTTTTTGATATTTAGAAAAATGCAAAGTGGTGAGCGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAGTATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGTTGCAGACCGGTCATTCGCATTTTTGGGAGGAATCTTTTTAGTAAGGGTGGGCTCTCCACGCAGATGCTTTTCTCTATGCCTAAGAAGAACAAGCCCCTCCGTCACTACCGTCAGGCAGACTGTGATGTGATTAAAATAGACGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCGGAACCAGAAAGAGAAGTTATGATGTTTCGTATTATGTTTAATACAGCATTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGCTTTCGAGCCGAGGTTTTGTTTGGGGAGATGGAAAGCATCTCCCCTCCAAGGGCTCCAACCTCCATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCATTTTCCAAGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAGCAACGATGATGCTGCCTTGTGGCTACTTAAGAATCTTTCTGCCTTGAGTGATGTGAAAGAATTGTCAAGATTGCAAAATAAAACAAGTTCATACTCCTCACCAGTGGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTCTTTGATATGATTACAAAGCCTTTTGTTGATTCAACTAATATCAACTTTACAAATCCGGCCATGGTACATTCTTCTGAATTATTGTCTGACAAGATTGGTGCTAATGAAGTGAATATTTCATCAGAGTCTCCTCAATCTTCTGATGAATTTCAAGACAAGATATTTTCAAATAAAGAACCTCTACCCTCTTCATCACCTCCACTAACTTCTTTTGGCTCCCCAGCCCTTCCTACAAGTTCTTCAATGTCATCGCCACTGTTGCCTCCATCTAATCTACCATCTGCCAATGCTAGTGGGGAACTTGTCTCAAATAGAATGGCACCCACTGTTAAAGCGATTCCTCCACCACCGCCGCCACCACCTTTTTCTCTATCACATAATAAACCTCATGTAGAAACTTCCTTTGGTTCAGATTTGACCACTGTGACAATGCATGGGAGACCCCCTCCACCCCCTCCACCTCCACCTCAATATCCTACTAGTAACAATTCTATTACAGCCTCTACTCATTCACTTTCTCATGTTCCTAAATCGTCTGATACTCCTCCACCCCCACCTCCACCTCCTCCTTTTGTTCCAAAATCTTCTAGTGCTCCCCCGCCTCCGCCCCTGGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCTCCACCTATAGTTCCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCAACATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCCCCTCCACCTCCTCCTCCACCTCCACCTATAGTTCCAAAATCTTTTGGTGCTCCTCCACCTCCGCCTCCACCTCCACCTATAGTTCCAAAATCTTCTATTGCTCCTCCACCTCCGCCTCCACCTCCAGTTTCAAAATCTTCTAATGCTCCTCCACCTCCTCCTCCTCCACCTCCATTTCTAAAGTCATCTAATGCTCTTCCATCTCCGCCTCTGCCTCCGCCTCCACCTCCGCTTCTAAAATCATCCAGTGCTCCTCCACCTCCACCTCCGCCTCCACCTTCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCACCTCCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCACCTCCACCTTCAATTCCAAAGCTTTCTGGTGCTCCTCCACCTCCACCTCCACCTCCTCTTCCACAATCAAATCGTGGTGCACCAGCTCCACCTCCTCCACCACCAAAACCTCCCAGTGTTGAGCTGCCAAGTCATGGTGCTAAATCAAGTAGACCTCCTCCACCTCCTCCACCAGCAAAGCCCTTCAATGCTCATCCTCCGACGAGCCATGGTGCTACACCAATGCCACCCCCTCCCCCCGGGTCAAGAGGATCAAATGTACCACCACCTCCTCCTCCTTCTGGACGAGGCAAAGCTTCCCTAGGATCAACAACTCAAGGAAGAGGCCGAGTTGCTACAGGAGTTGTAAATGCTCCAAAAAAAACCACTTTAAAACCATTACACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCGAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGTGGCAGTAAAGGTGGAGGACGACGTGGTTCCAGCATCAACAAACCTGAAAAAGTGCAACTGATTGACCTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATACAGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTCCCACGGATAGAGCCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATATCATTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCCGCAAAATTGCGTCAGATAATGCAAACGATTCTTACACTGGGAAATGCGTTAAACCAGGGTACTGCTCGAGGCTCAGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGTTAACACCCCCACCCAAAAAAAAAAAAAAAAAGCTCATTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGGACCTCGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAGGAAATGCAAGCAGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACCGCTTCAGAAAATGATGGTGCCATCTCTGCTGGTTTCCAGAAGGTGCTGAAGAATTTTCTTGATACGGCTGAAGCTGAAGTAAGGGCACTTATCTCTTTATATTCTGAAGTGGGGAGAAATGCTGATTCACTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTTACTCAAATTTTAATAGTCTTCGTTAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCCGATGCTGATAAGAGAAAAACAGAGAAGGAAGCCATGAAAGAACGAAGTTCGGTTAAAGCAAAGTTTGAATGTGAATATCAGATTTGTGATTCATGGACTTCCATCAAGCTGAACATGAGGCAATTTTGTTCCCAGGTTGGCTATTTGCCTTCCTGTACAGCCATTTCTTTCATCAATATCGTGGCTTGTAAATACGATGTGACGCAATTACAGGCTCGGGGAGTGGTTGCCATTTGA 4608 45.49 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGENRSQFSEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKMQSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMLFSMPKKNKPLRHYRQADCDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEMESISPPRAPTSILNGEEKGGLPIEAFSKVQELFSGVEWIDSNDDAALWLLKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSSDEVFDMITKPFVDSTNINFTNPAMVHSSELLSDKIGANEVNISSESPQSSDEFQDKIFSNKEPLPSSSPPLTSFGSPALPTSSSMSSPLLPPSNLPSANASGELVSNRMAPTVKAIPPPPPPPPFSLSHNKPHVETSFGSDLTTVTMHGRPPPPPPPPPQYPTSNNSITASTHSLSHVPKSSDTPPPPPPPPPFVPKSSSAPPPPPLVPKSFGAPPPPPPPPPPPIVPKSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPTSSSALPPPPPPPPPPPPPPPPIVPKSFGAPPPPPPPPPIVPKSSIAPPPPPPPPVSKSSNAPPPPPPPPPFLKSSNALPSPPLPPPPPPLLKSSSAPPPPPPPPPSKSSSALPPPPPPPPPKSSSALPPPPPPPPPPSIPKLSGAPPPPPPPPLPQSNRGAPAPPPPPPKPPSVELPSHGAKSSRPPPPPPPAKPFNAHPPTSHGATPMPPPPPGSRGSNVPPPPPPSGRGKASLGSTTQGRGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSSINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYTGDREMLGKCEQFFLELMKVPRIEPKLRVFAFKITFSSQVNDLRYHLNTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLTPPPKKKKKKLIAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISAGFQKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADADKRKTEKEAMKERSSVKAKFECEYQICDSWTSIKLNMRQFCSQVGYLPSCTAISFINIVACKYDVTQLQARGVVAI 1535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2464641 2476630 + ClCG07G002400.1 Cla07g00225 276213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00225 1535 PANTHER FORMIN-J 1 753 - -
Cla07g00225 1535 PANTHER FORMIN-J 971 1475 - -
Cla07g00225 1535 SMART it6_source 515 1511 IPR015425 -
Cla07g00225 1535 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Cla07g00225 1535 MobiDBLite consensus disorder prediction 1115 1134 - -
Cla07g00225 1535 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Cla07g00225 1535 MobiDBLite consensus disorder prediction 560 574 - -
Cla07g00225 1535 MobiDBLite consensus disorder prediction 578 593 - -
Cla07g00225 1535 MobiDBLite consensus disorder prediction 489 1066 - -
Cla07g00225 1535 Gene3D - 197 342 - -
Cla07g00225 1535 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 187 IPR029021 -
Cla07g00225 1535 Pfam Formin Homology 2 Domain 1066 1447 IPR015425 -
Cla07g00225 1535 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1074 1465 - -
Cla07g00225 1535 MobiDBLite consensus disorder prediction 611 988 - -
Cla07g00225 1535 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Cla07g00225 1535 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1061 1472 IPR015425 -
Cla07g00225 1535 MobiDBLite consensus disorder prediction 543 558 - -
Cla07g00225 1535 MobiDBLite consensus disorder prediction 995 1043 - -
Cla07g00225 1535 SMART PTEN_C2_2 198 1189 IPR014020 -
Cla07g00225 1535 Coils Coil 1353 1380 - -
Cla07g00225 1535 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cla07g00225 1535 Gene3D Formin, FH2 domain 1063 1458 IPR042201 -
Cla07g00225 1535 MobiDBLite consensus disorder prediction 594 610 - -
Cla07g00225 1535 MobiDBLite consensus disorder prediction 489 536 - -
Cla07g00225 1535 MobiDBLite consensus disorder prediction 406 431 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01227 Cla-Chr6:25525775 Cla07g00225 Cla-Chr7:2464641 2.97E-143 dispersed
Cla06g01570 Cla-Chr6:29256796 Cla07g00225 Cla-Chr7:2464641 1.80E-10 dispersed
Cla07g00225 Cla-Chr7:2464641 Cla02g01189 Cla-Chr2:25442545 9.47E-27 dispersed
Cla07g00225 Cla-Chr7:2464641 Cla07g00231 Cla-Chr7:2572105 1.83E-26 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00225 - - csv:101217517 1056.97