Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00231 ATGTTTAATTCCTTATTCTTCTTCTTCTTCATTCTGTTAGTTCACTGTAAATCTTCTGAAATTGCTGGAGGTGGTCGTAGATTGCTTCATCAACCATTTTTCCCACTTGATTCTGTTCCTCCGGCGGAGCCGCCGTCGACTCCGGTACCACCGCCACCGAATCCCAAGTACCCATTTTCCACTACCCCTCCTACTAATCCTGATGGGTCTCCATTTTTTCCGACGTATCCTGGAACCCCACCTCCTCCGGCGCCGGCGAGTTTCGCATCGTTCCCGGCTAATATTTCTTCTCTGATTCTACCTCATTCGTCTCAGTCTGGTTCAGCTTCTAAGAAGGTTGTTCCGTTGGTTGTTGCTGGGGTTGTTTCCGTTGTCTTGGTTGTCTGCATTGCTGGGTTTTTGTACTGGCGGAGACGGCGTGGTCGTGGGTTGGGCGATGACAAGACGTACAGATCCGAAAATAGTAGCCGGTTGTGTCCGGTTCCGAATGTTGAAGTCGGTAATGGAATCCCTAAGTTGAGACATCCCTCTGCTACTAGCTCTGAGTTTCTGTATTTGGGTACTCTTGTGAACTCGAGAGCGATCGATGAGCGTTCCGTTGGGGGAGCTCGTGTTGCTGATCCTAGGTCGTTGGATTCGCCGGAGCTTCATCCGCTTCCGCCGTTGAATTTTGGTCGGTCGAGTGAGAAGCAAAATTGTGGAAATGGAGAGGAGAGATCGATGGGAGATGAGGAGGAAGAGGAATTTTACTCTCCTAAAGGTTCTCTCGGCGCAATTGGTTCGGGATCTCGAAGAGTGCTCGCAACAATGGCGGCTGAAGATTTGCTTGGCAAAACCAGCGATTCGAGCACTACTTCGTATTCCACATCCAGCGGTTCCGTTTCGCCGGCGAGATCACGTTCTAAGAGTCTCTCTCTATCTCCACCGGCGAGTTTGAGCCCAAGAAGATCCGTTCAAAATGAATCTTCTAATTTCTCTGTTTCTGCCACTGTAGCGACGGAGCAAAATTCACCGCCATTGACGCCGCCGCTTTCCCACGCCGGGGTGGAATCAGACGACGGCGTTAAATCCCATTGCCCATCTCCAATGCGTTTATCGACGGATAAAGTTCCGGAGAAAAGCTCCACCGCATCTTCATCCCGGAGGTATTCTAATGTTTCAGTTCACAGTGTGATGTTCCCAATTTCAACAACCGCTAAGGATTTAGTTAATCATGACGATACGAGCAATAATCACGAAGAATCTCCAAGACAATCCCATAATTCAGATCCAGACGAGCCGTTTCCATTTTCTCCTTGTTTATTTCCTCTTTCAGATGGAATTTTAGGGCAAATTCAGATTCAATTGCCCACGGTTTCAAACATTCCCGATTCCGATTCTGAAGCAAAACTTAAGCAACTTCCTTACTCCTTTACTTCATCTTCACCTTCATCGTCGCCGGAGAGAGTAGTTATGGACTCATCTCCGTCAAGAACATCCATTATTTCAGATCAAAACAGGTCTTCTCCACCATCACCAGAGAGAATTGTGTTTAGTGATTCAGATTCATCAAAGAGAACTCTAGACCATTTTGATCAAGATGTGAAATCTTCTTCTGCTGACATCAATACCACTGATGTGGCCCCTCTGCCAGAACGCTGGGAAATGCCTATTTCTCCTTCTACACCAATGGACCAATCCATTCCAAAGGCGCCTCCTCCATTAGTGCCTCCATTAAGGCCATTTATGATGGAGAATGTGAAAAACGTCTCACCAATTCAGTTGCCATCCTGCAAAAGCAATGGCGAATCATCTGAAGACACCCCCAAGCCCAAGTTGAAGCCATTGCATTGGGACAAAGTAAGGGCCAGTTCTGATCGTGAGATGGAGACAACTCCACGCACCGTGCTTCCTCCACCTAACCAAGAGATCGGAGTTCTCGATCCCAAAAAGTCGCAGAACATTGCAATTGCGTTACGGGCGCTTAATGTGACCATAGAAGAAGTTCGTGATGCCCTTTTAGAAGGTAATGCAGATGCACTTGGAGCAGAGCTACTTGAAAGTTTATTGAAGATGGCTCCAACAAAAGAAGAAGAACGTAAACTAAAGGCATCCAAGGATGTATCACCTACAAAGTTTGGCCCTGCTGAGAAATTTTTGAAGGCAGTCCTTGATGTTCCTTTTGCATTTAAAAGGGTGGATGCAATGCTTTACATAGCAAATTTCGAGTCTGAGATTGAGTACCTAAAGAAATCATTCGAAAATCTTGAGACTGCTTGCGAGGAATTGAGGAATAGCAGGATGTTCTTGAAACTTTTGGAAGCTGTGCTCAAGACCGGGAATCGGATGAATGTTGGCACCAACCGCGGTGATGCCCATGCCTTCAAACTTGACACACTTTTGAAGCTTGTTGATGTCAAGGGTGCAGATGGAAAAACCACTCTTCTGCATTTTGTTGTACAAGAAATCATAAGAAGTGAAGGAGCTCGTCTTTGTGTCACGAGTCAAATTCCAAACTCCAACCCGAGTGATGATGCCAAATGCAGGAAACTCGGCCTGCAAGTTGTATCGGGTCTCAGCTCAGAGCTTGCCAACGTAAAGAAGGCAGCTTCAATGGATTCCGATGTGCTCAGTGGCGAGGTCATCAAGCTTTCGAGAGGACTCGACAACATCAGAGAGGCTCTACGTCTAAACGAAGCAGACGGGCCAAACGAAAGCACAGAAAAGTTCTCAGAGTCAATGAGCAGATTCTTGAAAATGGCAGAAGAGGATATCATCAGAGTCCAAGCCCATGAAAGTGTTGCTTTATCTCTAGTAAAGGAGATCACAGAGTACTTCCATGGCAACTCTGCCAAAGAAGAAGCTCATCCATTTAGAATTTTCATGGTGGTAAGAGATTTCCTAACAATTCTTGATGGAGTCTGCAAAGAAGTCGGAATGATAAACGAGCGGACGATTGTAAGTTCTGCCCATAAATTTCCAGTTCCAGTGAATCCAACATTACCACAAGCATTTCAAGCTCTTCATAGAGTGCAGAAATACAATTCTTCTGATGAAGAAAGTGAACAATCCCCATAA 3057 46.03 MFNSLFFFFFILLVHCKSSEIAGGGRRLLHQPFFPLDSVPPAEPPSTPVPPPPNPKYPFSTTPPTNPDGSPFFPTYPGTPPPPAPASFASFPANISSLILPHSSQSGSASKKVVPLVVAGVVSVVLVVCIAGFLYWRRRRGRGLGDDKTYRSENSSRLCPVPNVEVGNGIPKLRHPSATSSEFLYLGTLVNSRAIDERSVGGARVADPRSLDSPELHPLPPLNFGRSSEKQNCGNGEERSMGDEEEEEFYSPKGSLGAIGSGSRRVLATMAAEDLLGKTSDSSTTSYSTSSGSVSPARSRSKSLSLSPPASLSPRRSVQNESSNFSVSATVATEQNSPPLTPPLSHAGVESDDGVKSHCPSPMRLSTDKVPEKSSTASSSRRYSNVSVHSVMFPISTTAKDLVNHDDTSNNHEESPRQSHNSDPDEPFPFSPCLFPLSDGILGQIQIQLPTVSNIPDSDSEAKLKQLPYSFTSSSPSSSPERVVMDSSPSRTSIISDQNRSSPPSPERIVFSDSDSSKRTLDHFDQDVKSSSADINTTDVAPLPERWEMPISPSTPMDQSIPKAPPPLVPPLRPFMMENVKNVSPIQLPSCKSNGESSEDTPKPKLKPLHWDKVRASSDREMETTPRTVLPPPNQEIGVLDPKKSQNIAIALRALNVTIEEVRDALLEGNADALGAELLESLLKMAPTKEEERKLKASKDVSPTKFGPAEKFLKAVLDVPFAFKRVDAMLYIANFESEIEYLKKSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCVTSQIPNSNPSDDAKCRKLGLQVVSGLSSELANVKKAASMDSDVLSGEVIKLSRGLDNIREALRLNEADGPNESTEKFSESMSRFLKMAEEDIIRVQAHESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDGVCKEVGMINERTIVSSAHKFPVPVNPTLPQAFQALHRVQKYNSSDEESEQSP 1018
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2572105 2577449 + ClCG07G002460.1 Cla07g00231 276219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00231 1018 Coils Coil 732 759 - -
Cla07g00231 1018 MobiDBLite consensus disorder prediction 368 383 - -
Cla07g00231 1018 MobiDBLite consensus disorder prediction 512 529 - -
Cla07g00231 1018 MobiDBLite consensus disorder prediction 278 383 - -
Cla07g00231 1018 Gene3D Formin, FH2 domain 601 985 IPR042201 -
Cla07g00231 1018 MobiDBLite consensus disorder prediction 402 430 - -
Cla07g00231 1018 MobiDBLite consensus disorder prediction 198 256 - -
Cla07g00231 1018 MobiDBLite consensus disorder prediction 469 539 - -
Cla07g00231 1018 MobiDBLite consensus disorder prediction 405 421 - -
Cla07g00231 1018 PANTHER FORMIN-RELATED 6 622 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cla07g00231 1018 MobiDBLite consensus disorder prediction 586 640 - -
Cla07g00231 1018 PANTHER FORMIN-RELATED 623 1016 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Cla07g00231 1018 MobiDBLite consensus disorder prediction 598 622 - -
Cla07g00231 1018 PANTHER FORMIN-LIKE PROTEIN 1 6 622 - -
Cla07g00231 1018 PANTHER FORMIN-LIKE PROTEIN 1 623 1016 - -
Cla07g00231 1018 Pfam Formin Homology 2 Domain 629 964 IPR015425 -
Cla07g00231 1018 ProSiteProfiles Formin homology-2 (FH2) domain profile. 562 990 IPR015425 -
Cla07g00231 1018 SMART it6_source 596 979 IPR015425 -
Cla07g00231 1018 SUPERFAMILY Formin homology 2 domain (FH2 domain) 635 973 - -
Cla07g00231 1018 MobiDBLite consensus disorder prediction 40 70 - -
Cla07g00231 1018 MobiDBLite consensus disorder prediction 469 511 - -
Cla07g00231 1018 MobiDBLite consensus disorder prediction 278 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01189 Cla-Chr2:25442545 Cla07g00231 Cla-Chr7:2572105 6.80E-15 dispersed
Cla07g00231 Cla-Chr7:2572105 Cla11g00087 Cla-Chr11:1122841 6.10E-16 dispersed
Cla07g00225 Cla-Chr7:2464641 Cla07g00231 Cla-Chr7:2572105 1.83E-26 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00231 - - bhj:120077761 1622.45