Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00233 ATGACTCTATTTTCATTCTCATTCTTGTTCGTAGTACTTCTTCAGTTATCTTTTCTGTTTAATAGTCTGACTGCCAAAAACGGCGACCACCACCACCACCACCTCCGATCACCAGGACTGAATACGAACCCGAACCCGCGACTCCATCAAGCATTCCTTGCTCTCCAAGCATGGAAAAAAGTCATTTACTCGGACCCAAAAAACCACACTACCAATTGGGTGGGGCCATCAGTTTGCAACTACTTTGGAGTGTATTGTGCCCCATCTCTTGATGACCCAAAAATCCAAGTGGTCGCCGGAATTGACTTAAACCACGGCGACATCGCCGGATTCCTCCCTAACGAATTGGGCCTTTTAACAGATCTTGCTCTGCTTCATCTCAACAGCAACCGATTCTGTGGCATTTTGCCACAATCTTTAGCCAATTTATCTCTTCTCTTTGAATTAGATTTAAGCAACAACAGATTCGTAGGCCCTTTTCCTTCTGTTGTTCTTCTCCTTCCAAAATTAACATATCTTGATCTTCGATTCAACGAATTTGAAGGCCCAATTCCCTCTGAACTCTTCAACAAAACCCTCGACGCCATTTTTATCAACAGCAATCGTTTCACCAACATTATCCCACGAAACATCGGTGGAAAATCTGCCTCTGTGATTGTCTTTGCTAACAACAATTTAAAGGGTTGTCTTCCACCCACAATTGCAAGTTTCGCAAACAGTTTAGAAGAGCTTTTGTTGATCAACACTAGTTTATCTGGCTGTTTGCCACAAGAAATTGGGTTTTTGTATAAATTGAAGGTTTTGGATGTGAGTTTTAACAAATTAATGGGTCCTTTGCCTTATAGTTTAGCTGGGTTAGCTCAATTGGAGCAATTGAATTTAGCCCATAATTTGTTTAGTGGGAATTTGTATGAAGGTATCTGTAGCCTTCCGAATTTGGAGAATGTGACAGTTTCTTATAATTACTTTTGTGAAGAAGAAGGGATTTGCCGGAATTTGACGGCGAAAGGGATTGCTTTTGATGATCGGCGGAATTGCTTGCCGGAGAAGCCGTTGCAGAGGAGTAAAAAGGAGTGTAGTGCGGTGGTTGAGCGTCCTGTGGACTGTTTTGAGCATCCGTGCGGCGGCGGCGGAGGTAATGGTTCTAGTATTGCGGCGGTTCCGGCTCCGACGCCAATTTCTTCACCTTCTTCCTTTGTTGCCCCTTCCCACTTGTGA 1218 43.6 MTLFSFSFLFVVLLQLSFLFNSLTAKNGDHHHHHLRSPGLNTNPNPRLHQAFLALQAWKKVIYSDPKNHTTNWVGPSVCNYFGVYCAPSLDDPKIQVVAGIDLNHGDIAGFLPNELGLLTDLALLHLNSNRFCGILPQSLANLSLLFELDLSNNRFVGPFPSVVLLLPKLTYLDLRFNEFEGPIPSELFNKTLDAIFINSNRFTNIIPRNIGGKSASVIVFANNNLKGCLPPTIASFANSLEELLLINTSLSGCLPQEIGFLYKLKVLDVSFNKLMGPLPYSLAGLAQLEQLNLAHNLFSGNLYEGICSLPNLENVTVSYNYFCEEEGICRNLTAKGIAFDDRRNCLPEKPLQRSKKECSAVVERPVDCFEHPCGGGGGNGSSIAAVPAPTPISSPSSFVAPSHL 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2591514 2592731 - ClCG07G002475.1 Cla07g00233 276221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00233 405 MobiDBLite consensus disorder prediction 387 405 - -
Cla07g00233 405 Gene3D Ribonuclease Inhibitor 216 339 IPR032675 -
Cla07g00233 405 Gene3D Ribonuclease Inhibitor 51 215 IPR032675 -
Cla07g00233 405 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 403 - -
Cla07g00233 405 PANTHER EXTENSIN-LIKE PROTEIN 13 403 - -
Cla07g00233 405 MobiDBLite consensus disorder prediction 385 405 - -
Cla07g00233 405 SUPERFAMILY L domain-like 51 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01020 Cla-Chr6:21872214 Cla07g00233 Cla-Chr7:2591514 3.16E-118 dispersed
Cla07g00233 Cla-Chr7:2591514 Cla11g00179 Cla-Chr11:2134236 8.54E-92 dispersed
Cla07g00233 Cla-Chr7:2591514 Cla11g00230 Cla-Chr11:2662401 3.64E-134 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00233 - - csv:101218757 699.508