Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00234 ATGGCGATTTTCTTCGCCGATTCTCAAATCTCCACCACCACAGCATCCGCTCAGGACCCCTTGTTGCCTTGGCTCTGGTCCATCAAAGATGCTCTTGAAAATTCAACTTCAGGCAATGTTTCTGGGCCAGAACTCGCCAACCTTCTCTCTGATTGCATTGAAAATTTCAGCGGCAATGTCAAGTACAAAAACGATGTCCGATTTCTCAAGATTTGGTTTCTCTCTATTGGTATGAGGGAGGATTTTGAAACTGGTTTCAAGGAATTGTTGGAGCAGGAGATATGCGTTGGCAATTCTTTACTTTATATTTGGTTGGCAGCGTTCCTCGAATCCAAGGGGAGGTTAAACGACGCTAACATAGTTTATGAACTTGGGTTGATGAGGAACGCTGAGCCCCTTGAGTGGCTGAAAAAGGCAAAAACATTGTTTATTGATAGGATATCTGAATTGGTCAATGCTAATTCAATGCAAGTGAATGATGGCAGTGAATCCACTAAATTGGCAGAAAGTTACATCAACCCCTGGTCTTCCTCCATTATGAACGATTTATTAAGCAAGATTAATCCAAAGATTATGAAGTATGATGGTTACCATTCAAGTACCAAAGTTTACTCTAAAAAGATGGCTCTAAAGTCATTGCGCAATTCATCAAGAAATAAGATTATTGAGATTGGTGGAAAGAAGTATGAGATCAAAGGCTGTGCAGGTACAGGCGGTTTTGCTCAAGTATATAAATCATATCTTGACAGCAACCCAGACGATGTAGTAGCACTGAAGATACAAACACCTCCTTTTCCTTGGGAGTTTTACATGTATCGTCAACTCGATCTACGTGTCACCGGGAAGCAAAGGTCAAGTTTTGGTTGTGCTCATGACATGTATCTCTATTCTGACTACAGCATACTTATATGTGATTACTTGGCTCATGGAACATTACAGGATGCCATAAATTTGTATGTAGTCCTTGGAAAGACAATGGAAGAAGTTTTATGTATTTATTACACCATAGAGATGCTCTACATGCTAGAAACTTTGCACAGCATTGGCATTATCCATGGGGATTTTAAACCTGACAATCTGCTTATTCGTTATGCGGGAGACAGCCTAACAGAAGATGAATTCCAGGAACGTAGTGGTCCTTGGCAAGATCAGGGGCTTTGCCTTGTTGATTGGGGAAGAGGTATAGATTTGCACCTTTTTCCTGAAAATGTAGAATTTAAAGGAGATTGCCGAACTTCTGGCTTTCGTTGTCCAGAAATGCTAGAGAATAAACCGTGGAAATATCAGGTAGACATATATGGCTTTTGTGTAGTCGTCCACACAATGCTTCACGGTTCCTACATGGAAGTTGAGAAAAAAGCATCATCTGATGGCGACTTTGTTTATTTACCCAAATCATCTTTTAAGCGAGTTTCAGATCAGCAATTTTGCTTTTATAGAGAGCATCCATCCTCTTCACCTCCTCCCTCTGATTTGATCTCTCTGCCTCCATATAGGTATTGGAACATTGAACTATGGAAGAATCTCTTCACAAAGTTGCTTAATATCACACCAGCTTCATTTCTGCATGAAATCGCATACCACTTGGTGATCTCTCACCATTTCTGTCTCTTTCACACTCGGCGGCCTTTACAGGTCCCCAAGATATGTGGCCATTCTCACCTCACTTCTAGGCTTTCCCTTGTCCTTCACTCCAAACGTTATAGTACTACAGGTTTATATGCTAGTGGAGTTTTGGAGAATCCCTTACAGACAGCTTATCATGGGACTGGCTTGGCTGGAGTTTCGCCCACTTCTCCTTTTCTTGTACAAGCTCCTTCTGAGAAAGGTGCAGCTGGCTTTGCTGTGGATTTTCTTATGGGAGGAGTTTCTGCTGCTGTTTCTAAAACGGCTGCTGCTCCAATTGAGCGTGTCAAGCTGCTGATCCAAAATCAGGATGAGATGCTTAAGACTGGTAGGCTATCTGAGCCATACAAAGGAATTACTGATTGCTTTGCCCGAACAATTAAAGATGAAGGAGTCATTTCTCTATGGAGGGGAAACACTGCAAATGTTATCAGATACTTCCCCACACAAGCTTTGAATTTTGCCTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAGAAAGATAGAGATGGTTACTGGAAATGGTTTGCTGGGAATTTGGCCTCTGGTGGTGCTGCTGGTGCTTCATCTCTACTATTTGTTTATTCCCTTGATTATGCTAGAACTCGTCTGGCCAATGATGCTAAGGCTGCTAAAAAGGGTGGTGAGAGGCAGTTTAATGGTCTTGTTGATGTTTACAAGAAAACCCTTAAATCTGATGGCATTGCTGGGCTGTATCGTGGATTTAACATCTCTTGTGTTGGAATTATTGTGTACCGTGGTCTTTACTTTGGAATGTATGATTCAATGAAGCCCGTGGTTTTGGTCGGTGATTTGCAGGATAGTTTCCTTGCTAGTTTCTTGCTTGGATGGTGTATCACAATAGGAGCTGGTTTGGCTTCTTACCCAATTGATACCGTCCGAAGAAGAATGATGATGACCTCTGGCGAAGCAGTCAAGTACAATAGCTCCTTGGACGCATTCAAACAGATCGTTAAGAATGAGGGTACTAAATCTCTCTTCAAGGGTGCTGGGGCAAACATTTTGCGTGCCGTTGCGGGTGCTGGTGTGTTGGCTGGGTATGATAAGCTTCAGCTCCTTGTTCTTGGGAAGAAATATGGTTCCGGTGGTGGTGGTTAA 2748 42.29 MAIFFADSQISTTTASAQDPLLPWLWSIKDALENSTSGNVSGPELANLLSDCIENFSGNVKYKNDVRFLKIWFLSIGMREDFETGFKELLEQEICVGNSLLYIWLAAFLESKGRLNDANIVYELGLMRNAEPLEWLKKAKTLFIDRISELVNANSMQVNDGSESTKLAESYINPWSSSIMNDLLSKINPKIMKYDGYHSSTKVYSKKMALKSLRNSSRNKIIEIGGKKYEIKGCAGTGGFAQVYKSYLDSNPDDVVALKIQTPPFPWEFYMYRQLDLRVTGKQRSSFGCAHDMYLYSDYSILICDYLAHGTLQDAINLYVVLGKTMEEVLCIYYTIEMLYMLETLHSIGIIHGDFKPDNLLIRYAGDSLTEDEFQERSGPWQDQGLCLVDWGRGIDLHLFPENVEFKGDCRTSGFRCPEMLENKPWKYQVDIYGFCVVVHTMLHGSYMEVEKKASSDGDFVYLPKSSFKRVSDQQFCFYREHPSSSPPPSDLISLPPYRYWNIELWKNLFTKLLNITPASFLHEIAYHLVISHHFCLFHTRRPLQVPKICGHSHLTSRLSLVLHSKRYSTTGLYASGVLENPLQTAYHGTGLAGVSPTSPFLVQAPSEKGAAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSEPYKGITDCFARTIKDEGVISLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSMKPVVLVGDLQDSFLASFLLGWCITIGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIVKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLLVLGKKYGSGGGG 915
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2593936 2602799 - ClCG07G002480.2 Cla07g00234 276222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00234 915 SUPERFAMILY Mitochondrial carrier 613 899 IPR023395 -
Cla07g00234 915 Gene3D Mitochondrial carrier domain 615 910 IPR023395 -
Cla07g00234 915 PRINTS Adenine nucleotide translocator signature 717 730 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla07g00234 915 PRINTS Adenine nucleotide translocator signature 822 838 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla07g00234 915 PRINTS Adenine nucleotide translocator signature 691 703 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla07g00234 915 PRINTS Adenine nucleotide translocator signature 658 679 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla07g00234 915 PRINTS Adenine nucleotide translocator signature 614 626 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla07g00234 915 SUPERFAMILY Protein kinase-like (PK-like) 226 456 IPR011009 -
Cla07g00234 915 Gene3D - 6 162 - -
Cla07g00234 915 Pfam Mad3/BUB1 homology region 1 9 126 IPR013212 -
Cla07g00234 915 ProSiteProfiles Solute carrier (Solcar) repeat profile. 612 705 IPR018108 -
Cla07g00234 915 ProSiteProfiles Solute carrier (Solcar) repeat profile. 717 809 IPR018108 -
Cla07g00234 915 Gene3D Transferase(Phosphotransferase) domain 1 226 478 - -
Cla07g00234 915 SMART mad3_bub1_i 8 126 IPR013212 -
Cla07g00234 915 ProSiteProfiles Solute carrier (Solcar) repeat profile. 821 903 IPR018108 -
Cla07g00234 915 SMART serkin_6 229 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00234 915 ProSiteProfiles BUB1 N-terminal domain profile. 6 167 IPR013212 -
Cla07g00234 915 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 565 914 - -
Cla07g00234 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 350 362 IPR008271 GO:0004672|GO:0006468
Cla07g00234 915 PRINTS Mitochondrial carrier protein signature 732 750 IPR002067 GO:0055085
Cla07g00234 915 PRINTS Mitochondrial carrier protein signature 617 630 IPR002067 GO:0055085
Cla07g00234 915 PRINTS Mitochondrial carrier protein signature 680 700 IPR002067 GO:0055085
Cla07g00234 915 PRINTS Mitochondrial carrier protein signature 630 644 IPR002067 GO:0055085
Cla07g00234 915 PRINTS Mitochondrial carrier protein signature 826 848 IPR002067 GO:0055085
Cla07g00234 915 PRINTS Mitochondrial carrier protein signature 782 800 IPR002067 GO:0055085
Cla07g00234 915 Pfam Mitochondrial carrier protein 716 809 IPR018108 -
Cla07g00234 915 Pfam Mitochondrial carrier protein 613 709 IPR018108 -
Cla07g00234 915 Pfam Mitochondrial carrier protein 818 904 IPR018108 -
Cla07g00234 915 ProSiteProfiles Protein kinase domain profile. 229 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00234 915 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 565 914 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cla07g00234 915 Pfam Protein kinase domain 231 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00234 Cla-Chr7:2593936 Cla08g01581 Cla-Chr8:28491837 2.62E-177 dispersed
Cla11g01860 Cla-Chr11:32107042 Cla07g00234 Cla-Chr7:2593936 2.20E-14 dispersed
Cla07g00234 Cla-Chr7:2593936 Cla08g01677 Cla-Chr8:29393289 5.47E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80670 PF00069 Pkinase 9.50E-17 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00234 K02178 - csv:101211883 925.62