Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g00238 | ATGAGCAGCGTTTGTGCGGAGCAACAGAAATTTCAATTTCAATTTCAATTTCCGTCTTCAGCTTCTGCTGCTTCTTCTTCGTGTTCTTCGTGGTTTCTTAAAGATATTAACGTTCCGCCGAGGAAGCTTGTCGCTGCGGTGAGACGAGAAAACGGTGAAATGTGTTCTGATTCGCCGCGGTTTTCGTTTGCTGTTGAATCTCTTTTGCAGAAATTTTTGCCGTTTAATGGCGAGGATGAAGCGGAGGAGGATGGAGATCCGTATTCGTCAGACCATTTTCGGATGTATGAGTTTAAGGTGAGGCGGTGTACTCGTAGTCGGAGTCATGATTGGACGGATTGTCCGTTTGCTCATCCAGGAGAGAAGGCACGGAGGCGAGATCCTCGTCGGTTTCATTACTCTGGCACGATGTGTCCGGAGTTTCGTCGCGGCGGTTGTGGCCGTGGTGATGGATGTGAGTTCGCTCATGGAGTTTTTGAATGTTGGCTTCATCCCGCGAGGTATCGTACTGAAGCTTGTAAAGATGGAAAAAATTGTAAGAGGAAGGTTTGTTTCTTTGCTCATTCGCCTCGTGAGCTTCGTCTTTTGCCTCCTGTGAGTAATTTTCAAGGCGGCTCTTGTTCTTCACCGAATAAGAGAAATTCTGGTCTTAGATCGGCCACTTCCGGTTCTAATCACTGCTGTTTGTTTTGTCATTGCGGTGGAGCCGCCACTTCCTCACCGACTTCAACGCTTTTCGGAATGTCTCATCTGTCTCCGCCACACTCTCCGCCGCTCTCGCCGGGAAAACCTCGGTCATCGATTAATGGATTTTCACCGATTTCGAGGTACAATCCTGATCAGTCTAAGTTAAATGGAGTTTTGAGCTATAAAGATGCACTGACTGAGCTGATGAGCTCAATTGAATCCATGAATATCGACGACGCCAATGCCACTTTAGCCGCCGCCGCCACCGCCACTCCAAGACAGACGATTCCTTGGATCGATGTTTCATCTCTCAACTCTGAAGATCAACTGCAGTTTGATCTCTCACCTTCTACTCCAAACGTGTCCGTCGAGAACAAAGGTAACCCCGACAATGGATGGGCCTCCTCCTCCGATCCGGATCTTAGATGGGTTAATGATCTGCTGATGTAA | 1137 | 48.11 | MSSVCAEQQKFQFQFQFPSSASAASSSCSSWFLKDINVPPRKLVAAVRRENGEMCSDSPRFSFAVESLLQKFLPFNGEDEAEEDGDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGTMCPEFRRGGCGRGDGCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRELRLLPPVSNFQGGSCSSPNKRNSGLRSATSGSNHCCLFCHCGGAATSSPTSTLFGMSHLSPPHSPPLSPGKPRSSINGFSPISRYNPDQSKLNGVLSYKDALTELMSSIESMNIDDANATLAAAATATPRQTIPWIDVSSLNSEDQLQFDLSPSTPNVSVENKGNPDNGWASSSDPDLRWVNDLLM | 378 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2631716 | 2632852 | + | ClCG07G002530.1 | Cla07g00238 | 276226 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g00238 | 378 | MobiDBLite | consensus disorder prediction | 344 | 364 | - | - | |
Cla07g00238 | 378 | SMART | c3hfinal6 | 132 | 158 | IPR000571 | GO:0046872 | |
Cla07g00238 | 378 | SMART | c3hfinal6 | 167 | 190 | IPR000571 | GO:0046872 | |
Cla07g00238 | 378 | ProSiteProfiles | Zinc finger C3H1-type profile. | 133 | 159 | IPR000571 | GO:0046872 | |
Cla07g00238 | 378 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2 | 35 | 377 | - | - | |
Cla07g00238 | 378 | PANTHER | UNKEMPT FAMILY MEMBER | 35 | 377 | IPR045234 | - | |
Cla07g00238 | 378 | Gene3D | - | 132 | 195 | - | - | |
Cla07g00238 | 378 | MobiDBLite | consensus disorder prediction | 344 | 366 | - | - | |
Cla07g00238 | 378 | MobiDBLite | consensus disorder prediction | 262 | 277 | - | - | |
Cla07g00238 | 378 | MobiDBLite | consensus disorder prediction | 247 | 277 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00238 | Cla-Chr7:2631716 | Cla10g01629 | Cla-Chr10:31945774 | 2.03E-57 | dispersed | |
Cla07g00238 | Cla-Chr7:2631716 | Cla03g01526 | Cla-Chr3:30903917 | 1.82E-66 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61376 | None | None | None | None | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g00238 | K23047 | - | csv:101211149 | 592.808 |