Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00239 ATGAAGCGTTATGTTTACATCAACGACGGTGAACCATCAACTGATCTTTATTGCGATAACCGCATTTCAAACCGGAAATACACATTATTGAACTTTCTCCCCAAAAATTTATGGGAACAGTTCAGCCGCTTCATGAACCAATACTTTTTGTTAATAGCATGCCTTCAGTTGTGGCCGCTTATAACTCCAGTAAATCCCGCCAGTACATGGGGTCCGCTTATCTTCATTTTTGCTGTGTCGGCAACAAAAGAGGCATGGGATGATTACAATAGATATTTATCTGACAAAAAAGCAAATGAGAAAGAAGTTTGGGTTGTGAAGCAGGGTACCAGAAAAATTATTCAAGCACAAGATATTCATGTTGGTAATTTGGTATGGCTTAGGGAGAATGATGAAGTGCCTTCCGATCTTGTTTTGATTGGTACCTCTGATCCTCAAGGAATTTGCTATATAGAGACATCTGCCCTTGATGGAGAAACTGACTTGAAGACAAGGGTCATACCCTCAGCTTGCATGGGAATCGATTTTGATCTGTTAAACAAGATCAAGGGAGTTATAGAGTGTCCTAAACCAGATAAGGATATTAGAAGATTTGATGCAAACATTAGGTTATTTCCTCCTTTTATTGACAATGACGTGTGCCCTTTAACAATAAAAAACACAATTCTCCAGTCATGTTACTTGCGGAACACAGAGTGGGTCTGTGGAGTAGCCGTCTATACAGGCAATGAAACCAAGCTTGGAATGAGCCGGGGTGTCCCAGAACCAAAACTTACAGCTATGGATGCAATGATCGACAAGTTAACTGGTGCTATATTTGTATTTCAACTCGTGGTGGTTGTTGTCCTCGGTATAGCTGGTAATGTGTGGAAGGATTCTGAAGCTAGAAAGCTATGGTATGTGCAACATCCAGAGGAAGGTCCATGGTATGAGCTTTTGGTTATCCCTCTTCGGTTTGAGCTTCTTTGTTCAATCATGATACCTATTTCAATTAAGGTGTCTCTGGATCTTGTAAAGAGCTTATATGCAAAATTTATTGATTGGGACTATGATATGATTGACTGTGAAACTGGTATTCCTTCCCATGCTACGAATACAGCAATAAGTGAGGACCTGGGACAAGTCGAATTCATTTTGACAGATAAAACCGGTACCCTCACTGAAAATAAGATGATCTTCAGGAGATGTTGTGTCAGTGGCATTTTTTATGGAAATGAAAATGGAGATGCCTTGAAAGATAAAAAGTTGCTCAGTGCTATTGCAAGCAGCTCTCCGGATGTTATAAGATTTCTCACAATTATGGCAATATGTAATACAGTGGTGCCTACAAGAAGCAAAAGTGGAAATATCTTGTACAAGGCACAGTCACAGGATGAGGATGCTCTCGTGAATGCTGCTGCCTATTTGCATATGGTATTTGTCAATAAGAACGCTAATATTCTTGAAATTCAGTTTAATGGAATGCTAAATAGATATGAGCTCCTAGATACTCTGGAGTTCACATCTGAACGAAAAAGAATGTCTGTGGTCGTTAAAGATTGTCAGAATGGGAAGATTGTCCTCCTGTCAAAAGGAGCAGATGAAGCTATACTTCCTTATGCTTGTGCTGGCCAGCAAACAAGAACATTTATTGAAGCCGTGGATCAATATGCGCAACTTGGTCTCCGCACATTATGTCTGGCTTGGCGTGAACTAGAGGAAGATGAGTATCAAGAATGGGCTCTTATGTTTAAGGAGGCTAATAGCACACTGGTTGACAGGGAGTGGAGGTTAGCTGAAGTTTGTCAAAGATTAGAGCGCAATTTTGAAGTCCTTGGAGTTACTGCTATAGAAGATAGGCTACAGGATGGAGTCCCTGAAACAATTGAAACATTAAGAAGAGCAGGAATTAATTTCTGGATGCTGACTGGAGACAAGCAGAACACCGCCATTCAGATAGCTCTTCTATGCAACTTTATTTCACCAGAGCCCAAAGGGCAGTTATTGTTAATTGATGGTAAAACGGAGGATGAAGTTTGTAGAAGTTTGGAGAGAGTTGTTCTGACTATGAAGACCACAACCTCAGAACCCAAGGATGTTGCTTTTGTTGTTGATGGATGGGCTCTCGAAATTGCTCTCAAGAATTATCGTAGGGCGTTCACGGAATTAGCAATACTATCAAGAACCGCAATATGTTGTCGTGTGACTCCATCACAGAAGGCTCAGCTTGTGGAACTCTTAAAATCGTGTGATTATAGAACACTGGCAATTGGAGATGGTGGGAATGATGTGAGGATGATACAGCAAGCTGACATTGGAGTTGGCATTAGTGGAAGAGAAGGACTGCAGGCAGCTAGGGCAGCTGATTATAGTATTGGAAAGTTTAGGTTTCTCAAAAGATTGATTCTAGTTCACGGACGATACTCGTACAACCGTACAGCATTCTTGTCACAATATTCATTCTATAAATCCTTATTGATATGTTTTATCCAGATCTCTTTCTCTTTCATATCAGGTGTCTCTGGGACCAGTCTCTTTAATTCTGTTAGCTTGATGGCGTACAATGTTTTCTACACCAGTATTCCTGTATTAGTTAGCGTCCTAGACAAAGATCTCAGTGAAGAAACGGTGATGCAACATCCTCAGATTTTATTTTACTGCCAAGCTGGGAGGATTTTAAATCCCAGCACGTTTGCTGGATGGTTTGGTCGATCTCTATTTCATGCTGTAGTCGTGTTTGTAATTAGCATACATGCCTACGCTAATGAAAAGAGTGAAATGGTGGAGGTCTCGATGGTGGCACTATCTGGGTGCATTTGGTTACAAGCTTTTGTAGTGACTTTGGAGACCAATTCATTCACAATGTTGCAACATCTTGCTATATGGGGGAATTTAGCTGCTTTCTACGTAATCAATTGGATCTTCAGCGCCATTCCTTCATCTGGGATGTATACAATAATGTTCCGCTTATGTGGACAACCATCTTATTGGATAACCATATTTCTAATAGTAGGTGTGGGAATGGGCCCACTTTTAGCAATAAAATACTTCAGATATACATATAGACCAAGCAAAATCAACACTCTCCAACAAGCTGAACGTTTGGGTGGGCCGATTCTGTCGCTCAAAAACATTGAGCATCAGCCTCGGCCCATTGAGAAAGAAGTTTCTCCCCTCTCAATAACTCACCCCAAAAACCGAAATACAGTTTACGAACCTTTGTTATCAGACTCTCCAACTGCCACTCGAAGATCTCTTGCATCAGCTTCTTCCTTTGATTTCTTTCAGACACCGCCAAGTTATTCAAGAAATAAGGACAATTGA 3303 40.72 MKRYVYINDGEPSTDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIHVGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLNKIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTEWVCGVAVYTGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWYVQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYDMIDCETGIPSHATNTAISEDLGQVEFILTDKTGTLTENKMIFRRCCVSGIFYGNENGDALKDKKLLSAIASSSPDVIRFLTIMAICNTVVPTRSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKNANILEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLLSKGADEAILPYACAGQQTRTFIEAVDQYAQLGLRTLCLAWRELEEDEYQEWALMFKEANSTLVDREWRLAEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRILNPSTFAGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTMLQHLAIWGNLAAFYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFRYTYRPSKINTLQQAERLGGPILSLKNIEHQPRPIEKEVSPLSITHPKNRNTVYEPLLSDSPTATRRSLASASSFDFFQTPPSYSRNKDN 1100
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2643070 2653142 - ClCG07G002540.2 Cla07g00239 276227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00239 1100 Pfam E1-E2 ATPase 99 293 - -
Cla07g00239 1100 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 573 IPR023299 GO:0000166
Cla07g00239 1100 Gene3D - 75 251 - -
Cla07g00239 1100 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 717 834 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla07g00239 1100 Gene3D - 602 790 IPR023214 -
Cla07g00239 1100 SUPERFAMILY HAD-like 375 805 IPR036412 -
Cla07g00239 1100 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Cla07g00239 1100 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Cla07g00239 1100 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Cla07g00239 1100 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Cla07g00239 1100 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Cla07g00239 1100 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 385 1097 - -
Cla07g00239 1100 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 13 330 - -
Cla07g00239 1100 SFLD p-type atpase 362 801 IPR044492 -
Cla07g00239 1100 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 1016 IPR023298 -
Cla07g00239 1100 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 385 1097 - -
Cla07g00239 1100 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 13 330 - -
Cla07g00239 1100 SFLD C1.7: P-type atpase like 362 801 - -
Cla07g00239 1100 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Cla07g00239 1100 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Cla07g00239 1100 Pfam Cation transport ATPase (P-type) 436 532 - -
Cla07g00239 1100 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 424 1023 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Cla07g00239 1100 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
Cla07g00239 1100 Gene3D - 448 589 IPR023299 GO:0000166
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00239 Cla-Chr7:2643070 Cla08g00858 Cla-Chr8:20979650 5.86E-173 dispersed
Cla07g00239 Cla-Chr7:2643070 Cla04g01120 Cla-Chr4:26405711 1.20E-180 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00239 K01530 - csv:101210900 2117.81