Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g00246 | ATGGACCGCCGTGTTCGTACAAACCCATTTGTCTCCGAGCAAGAAGATCCTGAAGCCACGTCGGATGACGGCTCACCGGAATCACCCTCCGACGGCAATGACTCAAAATCCGCCTCCGCCGGCCCACCTCCCAAAAAGAGTAGAAGGGGAGTGCAGAAGAGAGTGGTGTCCGTACCGATCGGTGACGTGGAAGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCCGATCCATGGGCATGGAGGAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGGGATATTATCGATGTAGTAGCTCCAAGGGCTGCCCAGCAAGAAAGCAAGTAGAAAGAAGCCGTGTGGACCCCACCAAGCTCGTTATTACCTACGCTTTCGACCACAATCACCAACTCCCGGCCACCAAATCTCACCACCACCACCACAATTCCTCCCCATCCTCCGCCGCGATCGCCGCCGCATCCACCGCAGCCGACTCTTCGTCCCCGGGGAGCACTACGACGTCGTCCTCCACTTCCTCCGGCGATAACACGAACGCCGCTCCATCGTCGCCGGCAGCGGCGGCGAAGTTCGAGGAGGCGGCTGCGGTTTTCGCAAGTCAGCCGGAACTGGAACTCGGCGGCGACTCGCTGATGATAAAACCATGCATCGGGGATTTCGGATGGTTGGCTGACGTGGCGTACGACAGAATCCTGGAGGGCCCGATTTGCGGGGGAGGCGACATATTCGACGACGCCGATGTAATGGTTTTGTCCACTACAGGTGATGACGAGGAGGAGTCGTTATTTGCGGATCTTGGGGAATTACCCGAAGGCTCTGTTGTTTTCGGCCGACGACGACCGGTCCAACCGGACGGACCAAACCGGACATGTGGCAGAGTTTTAGACTGCTAG | 903 | 57.48 | MDRRVRTNPFVSEQEDPEATSDDGSPESPSDGNDSKSASAGPPPKKSRRGVQKRVVSVPIGDVEGSKSKGEAYPPSDPWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLVITYAFDHNHQLPATKSHHHHHNSSPSSAAIAAASTAADSSSPGSTTTSSSTSSGDNTNAAPSSPAAAAKFEEAAAVFASQPELELGGDSLMIKPCIGDFGWLADVAYDRILEGPICGGGDIFDDADVMVLSTTGDDEEESLFADLGELPEGSVVFGRRRPVQPDGPNRTCGRVLDC | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2705874 | 2708710 | - | ClCG07G002620.1 | Cla07g00246 | 276234 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g00246 | 300 | MobiDBLite | consensus disorder prediction | 137 | 189 | - | - | |
Cla07g00246 | 300 | MobiDBLite | consensus disorder prediction | 1 | 115 | - | - | |
Cla07g00246 | 300 | MobiDBLite | consensus disorder prediction | 23 | 37 | - | - | |
Cla07g00246 | 300 | Pfam | WRKY DNA -binding domain | 77 | 134 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00246 | 300 | MobiDBLite | consensus disorder prediction | 147 | 187 | - | - | |
Cla07g00246 | 300 | PANTHER | OS01G0750100 PROTEIN | 19 | 283 | - | - | |
Cla07g00246 | 300 | SMART | WRKY_cls | 75 | 135 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00246 | 300 | SUPERFAMILY | WRKY DNA-binding domain | 71 | 136 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00246 | 300 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 19 | 283 | IPR044810 | GO:0003700 | |
Cla07g00246 | 300 | Gene3D | WRKY domain | 63 | 137 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00246 | 300 | ProSiteProfiles | WRKY domain profile. | 76 | 136 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00246 | Cla-Chr7:2705874 | Cla05g00141 | Cla-Chr5:1297484 | 7.21E-28 | dispersed | |
Cla10g01093 | Cla-Chr10:25148545 | Cla07g00246 | Cla-Chr7:2705874 | 1.69E-31 | dispersed | |
Cla03g00699 | Cla-Chr3:8466093 | Cla07g00246 | Cla-Chr7:2705874 | 2.35E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61378 | PF03106 | WRKY | 2.10E-24 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g00246 | - | - | csv:101209422 | 461.84 |