Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00254 ATGGAACTTGAAGACGACTACCGAAGAAAACAGCAACTCCTTCTTCTGGTAATCGTTGTACTTGCTTCTCTCGCTCTCGTTTCTTTGCTCGTCGCTTTCAGCTATTACTGCTATATCAGCAATAAGGTCTCCAAGCGCCTCAAGATCCGCAAAAGGGCTGATCTTGAAGATGGAGGTAGTTTTGAAAATGGTAAAGAATTTTCCACTGAGAAAGGTCTCCAATTGTTCACCTTCAAGCAGCTACACTCCGCAACAGGTGGTTTTAGCAAGTCAAATGTGGTTGGGCATGGTAGCTTTGGGCATGTATATCGGGGAGTCCTGAACGATGGGAGAAAGGTTGCGGTTAAGCTTATGGATCAAGCAGGGAAGCAGGGAGAGGATGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGCCTTCATTCACCATATTTGTTGGCATTGCTTGGGTATTGCTCAGATAACAATCATAAATTACTCGTATACGAGTTCATGGCAAATGGCGGTCTGCAAGAACATCTATACCCTATTAGCAGTTCAAATTCAATCAGCATTAAGTTGGACTGGGAAACACGACTGAGAGTTGCCCTCGAAGCTGCCAAAGGTTTGGAGTATTTACATGAACACGTCTGTCCCCCGGTAATTCATAGGGATTTCAAGAGCAGCAATGTCCTGCTGGACAAAAACCTTCATGCTAAGGTTTCTGATTTTGGATTGGCAAAGATCGGCTCAGACAAAGCTGGGGGTCACGTCTCCACTCGAGTTTTAGGGACAAAAGGATATGTTGCCCCTGAGTATGCGCTAACAGGGCATTTAACAACAAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTCACTGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCGAGGCTGACTGATAGGGAGAGAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAGTACTCCATGAAAGATGTTGTTCAAGTGGCAGCAATTGCAGCAATGTGTGTTCAACCGGAGGCGGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCGCTTGTGAGAAATTACCAGACTTCAAAGATCGGTAGCAGTTCTAGTTCCAGCGCTACCAAGTCACCTGCAGCGCACGACAATGCTAGTTCGGGAGACTGA 1197 46.45 MELEDDYRRKQQLLLLVIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRADLEDGGSFENGKEFSTEKGLQLFTFKQLHSATGGFSKSNVVGHGSFGHVYRGVLNDGRKVAVKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPISSSNSISIKLDWETRLRVALEAAKGLEYLHEHVCPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKAGGHVSTRVLGTKGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDRERVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYQTSKIGSSSSSSATKSPAAHDNASSGD 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2802426 2805353 - ClCG07G002710.2 Cla07g00254 276242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00254 398 SUPERFAMILY Protein kinase-like (PK-like) 66 364 IPR011009 -
Cla07g00254 398 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Cla07g00254 398 Gene3D Transferase(Phosphotransferase) domain 1 164 388 - -
Cla07g00254 398 CDD STKc_IRAK 94 367 - -
Cla07g00254 398 Gene3D Phosphorylase Kinase; domain 1 55 163 - -
Cla07g00254 398 PANTHER OS01G0750732 PROTEIN 3 394 - -
Cla07g00254 398 PANTHER OS07G0227300 PROTEIN 3 394 - -
Cla07g00254 398 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672|GO:0006468
Cla07g00254 398 MobiDBLite consensus disorder prediction 375 398 - -
Cla07g00254 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Cla07g00254 398 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00254 Cla-Chr7:2802426 Cla10g01096 Cla-Chr10:25170630 4.03E-107 dispersed
Cla07g00254 Cla-Chr7:2802426 Cla03g01614 Cla-Chr3:32011279 2.11E-146 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80672 PF07714 PK_Tyr_Ser-Thr 1.40E-44 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00254 - - csv:101204636 736.487