Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00262 ATGGCTTCCACTAAAGAACGCGAGAACTTCGTTTACATCGCTAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACAGTTGAGGAAAGAAACTTACTTTCTGTTGGGTACAAGAATGTGGTTGGTGCACGGAGAGCCTCATGGAGAATCTTATCATCAATAGAGCAGAAAGAAGAAGCGAAAGGAAATGAAACAAATGCTAAACGCATCAAAGAATACAGACAAAAGGTTGAATCAGAGCTCTCTGGTATTTGTAATGATATCATGACAGTGATTGACGAGCACCTAATTCCGTCGGCTTCAGCTGGGGAATCAACAGTATTCTACTATAAGATGAAAGGAGACTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCATATGAGGCTGCAACCAGCTCAGCCGAATCTGAGTTACCCCCTACACATCCTATCCGCTTGGGGTTGGCATTAAATTTCTCTGTCTTCTATTATGAAATCTTGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCTTTTGATGAAGCCATTTCCGAACTTGACACCCTGAATGAGGAGTCATACAAAGATAGCACCTTAATCATGCAGCTTCTTAGGGACAACCTTACATTATGGACTTCTGACATCCCAGAAGATGGAGAACAAGAGTTCACATTGCTCATTAACATGATGCCCAAAAGATCAATGGCACTGCCAAGGTTTCTGGTGGTGACGATGCCGAGTGAAGTGGATAGCATCTTAATTGGCACAATCTGTACTCTGGAGATGATGGATGTGACTCGGATAATTGCCCTTAGTGTTTAG 891 42.76 MASTKERENFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNETNAKRIKEYRQKVESELSGICNDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEQEFTLLINMMPKRSMALPRFLVVTMPSEVDSILIGTICTLEMMDVTRIIALSV 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2904787 2908612 + ClCG07G002800.2 Cla07g00262 276250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00262 296 Coils Coil 13 33 - -
Cla07g00262 296 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Cla07g00262 296 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Cla07g00262 296 Gene3D - 1 248 IPR036815 -
Cla07g00262 296 SMART 1433_4 7 248 IPR023410 -
Cla07g00262 296 Pfam 14-3-3 protein 14 235 IPR023410 -
Cla07g00262 296 PANTHER 14-3-3 PROTEIN 4 247 IPR000308 -
Cla07g00262 296 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Cla07g00262 296 Coils Coil 195 215 - -
Cla07g00262 296 PIRSF 14-3-3 1 247 IPR000308 -
Cla07g00262 296 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 4 247 - -
Cla07g00262 296 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Cla07g00262 296 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Cla07g00262 296 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Cla07g00262 296 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Cla07g00262 296 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Cla07g00262 296 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02397 Cla-Chr5:35521249 Cla07g00262 Cla-Chr7:2904787 2.89E-142 dispersed
Cla07g00262 Cla-Chr7:2904787 Cla11g01382 Cla-Chr11:27349996 5.24E-128 dispersed
Cla07g00262 Cla-Chr7:2904787 Cla08g01110 Cla-Chr8:23868916 6.42E-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00262 K06630 - csv:101208446 465.692