Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00266 ATGTCTTCTTCTTCTCCATCCACTCTCTTCTGCGCCGTAATTTCGTTTCTAATCTCCATTTCCATCTCAGTCTCAGCTACAGAGTTTGTCTTCAACACCAATTTCACTTCCACCAATACTTTGCTCTTCGGCAACGCCACCATTGATTCTTCTCTTCTTATTCTCACTAGAGATTCCCCTTTCACCATCGGCCGTGCCCTTTACCCTTTCAAAATTCCCATCCATTTTTCCAATTCTTCATTTTCCTTTGCAACTTCCTTCATTTTCTCTGTTGCCCCTCAGCCAAATCTTCTCCCTGGCCATGGATTTGCTTTTCTCTTCACACCCTTTACTGGAATCAACGGCACCAGCTCGGCTCAGCATTTGGGGCTGTTCAATTTCACCAATAATGGCAGCCCCAATAACCATGTCTTCGCTGTTGAGTTCGATTCGTTCCAAAATCAGGAGTTCAATGACACTAATGATAACCACGTGGGCGTGGATTTGAATTCTCTTGAATCTACTGTTTCCTCAGCAGCTGGGTTTTGGAGTGGACCAGATGATGCAGAATTCAAGGTATTGAAGATCAATAACGGAGAAACTTATCAGGTTTGGGTTGACTGTCTAGATTCTTTAGTTAATATTACTATGGCAGAACTTGGAATGAAAAGGCCTAGAAGGCCATTGATATCTCTGTCTGTTAATTTTTCTGGATTGCTTTTGGATGAGATGTATGTAGGATTTACAGCAGCCACAGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGAGTTTTAGTACCTCTAACTTGTCTATTGCTGATTCTTTACTGATAACGAATTTGCCTTCTTTTGTTCCTCAAAAGGAGGACGCCACTTTTGAATCAATAGCTTTCATATTGGGGATAACTCTTGGGGGAGCTGGACTTGTGATTATCTGTAGTTTTGTAATCTATGTTGCTGTAGTTGTCAAAAGGAGGGGAAGAAAGAAACCAAAGGATGATGAAATTGAAGATTGGGAGTTAGAATATTGGCCTCATCGGTTTGCTTATGAAGATGTTTATGAAGCAACTGATGGATTCTCAGAAGCCAATGTAATTGGGTTTGGGCGAAATGGTAAGGTCTATAAAGGGACATTAGGGAGATCAAAAGTTGCTGTAAAGAGAATCTCTGTTGAAGTTGAGAGTGGAATGAGAGAGTTTGTAGCTGAGATTTCAAGCTTAGGAAGATTACAGCATAGAAATCTAGTAAAGCTTATAGGATGGTGTAAGAAGGAGAAAGGAAGTTTAATCTTAATGTATGATTACATGGAAAATGGAAGTTTAGACAAAAAACTATTTGAGTGTGATGAGAATGAAATGTTAAGTTGGGAGAAAAGGATAAAAGTTTTGAGAGATGTAGCCACAGGGTTGCTATATCTACACCAAGTCTCAGCTACAGAGTTTGTCTTCAACACCAATTTCACTTCCACCAATACTTTGCTCTTCGGCAACGCCACCATTGATTCTTCTCTTCTTATTCTCACTAGAGATTCCCCTTTCACCATCGGCCGTGCCCTTTACCCTTTCAAAATTCCCATCCATTTTTCCAATTCTTCATTTTCCTTTGCAACTTCCTTCATTTTCTCTGTTGCCCCTCAGCCAAATCTTCTCCCTGGCCATGGATTTGCTTTTCTCTTCACACCCTTTACTGGAATCAACGGCACCAGCTCGGCTCAGCATTTGGGGCTGTTCAATTTCACCAATAATGGCAGCCCCAATAACCATGTCTTCGCTGTTGAGTTCGATTCGTTCCAAAATCAGGAGTTCAATGACACTAATGATAACCACGTGGGCGTGGATTTGAATTCTCTTGAATCTACTGTTTCCTCAGCAGCTGGGTTTTGGAGTGGACCAGATGATGCAGAATTCAAGGTATTGAAGATCAATAACGGAGAAACTTATCAGGTTTGGGTTGACTGTCTAGATTCTTTAGTTAATATTACTATGGCAGAACTTGGAATGAAAAGGCCTAGAAGGCCATTGATATCTCTGTCTGTTAATTTTTCTGGATTGCTTTTGGATGAGATGTATGTAGGATTTACAGCAGCCACAGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGAGTTTTAGTACCTCTAACTTGTCTATTGCTGATTCTTTACTGATAACGAATTTGCCTTCTTTTGTTCCTCAAAAGGAGGACGCCACTTTTGAATCAATAGCTTTCATATTGGGGATAACTCTTGGGGGAGCTGGACTTGTGATTATCTGTAGTTTTGTAATCTATGTTGCTGTAGTTGTCAAAAGGAGGGGAAGAAAGAAACCAAAGGATGATGAAATTGAAGATTGGGAGTTAGAATATTGGCCTCATCGGTTTGCTTATGAAGATGTTTATGAAGCAACTGATGGATTCTCAGAAGCCAATGTAATTGGGTTTGGGCGAAATGGTAAGGTCTATAAAGGGACATTAGGGAGATCAAAAGTTGCTGTAAAGAGAATCTCTGTTGAAGTTGAGAGTGGAATGAGAGAGTTTGTAGCTGAGATTTCAAGCTTAGGAAGATTACAGCATAGAAATCTAGTAAAGCTTATAGGATGGTGTAAGAAGGAGAAAGGAAGTTTAATCTTAATGTATGATTACATGGAAAATGGAAGTTTAGACAAAAAACTATTTGAGTGTGATGAGAATGAAATGTTAAGTTGGGAGAAAAGGATAAAAGTTTTGAGAGATGTAGCCACAGGGTTGCTATATCTACACCAAGGTTGGGATTCCAAGGTTCTGCATAGAGATATAAAGGCGAACAACGTGCTACTAGACAAGGACATGAATGCTAGGTTAGGAGACTTTGGGTTGGCTCGAATGCAACCCCATGAACGAACAGCAGACACAACTCGTGTAATGGGGACTGTCGGGTATATGGCACCAGAGGTGGTTCGAACAGGGCGAGTATCTGCACAAGCGGATGTTTTCGGGTTCGGAGTGTTGGTTTTGGAGGTGGTTTGTGGGAGGAGAGCAATAGAAGAAGGGAAGCCATGGTTAATAGATTGGGTTAGAGGATTAGTGGAGAGGAATGAGATTGGATTAGCAGTTGATGAGAGATTGAAAGTTGAGGGTATAAGTGGGAATGAGATTGATGAAATGGAGAGAATGGTTTGTTTGGGGTTATTATGTGCTCATAATGAAGCTGGTGCAAGGCCAACAATGCAACAAGTTGTGAATATTTTGTGTGAGAGAAATGGAAATGGTTCAAATGATGGATTGTTAAATAGATTAAGATCAACAAGAATACTGTCTGAGATTTACCAAGGCAACAACTTTCAGCAACATCATCCAACGTTTGAAGAAATCAAAACATCTTCATCTTCAACATCACTCATTGAATCAGATATTTTAAGGAGTGGCCGCTAG 3393 40.26 MSSSSPSTLFCAVISFLISISISVSATEFVFNTNFTSTNTLLFGNATIDSSLLILTRDSPFTIGRALYPFKIPIHFSNSSFSFATSFIFSVAPQPNLLPGHGFAFLFTPFTGINGTSSAQHLGLFNFTNNGSPNNHVFAVEFDSFQNQEFNDTNDNHVGVDLNSLESTVSSAAGFWSGPDDAEFKVLKINNGETYQVWVDCLDSLVNITMAELGMKRPRRPLISLSVNFSGLLLDEMYVGFTAATGQLVQSHKILSWSFSTSNLSIADSLLITNLPSFVPQKEDATFESIAFILGITLGGAGLVIICSFVIYVAVVVKRRGRKKPKDDEIEDWELEYWPHRFAYEDVYEATDGFSEANVIGFGRNGKVYKGTLGRSKVAVKRISVEVESGMREFVAEISSLGRLQHRNLVKLIGWCKKEKGSLILMYDYMENGSLDKKLFECDENEMLSWEKRIKVLRDVATGLLYLHQVSATEFVFNTNFTSTNTLLFGNATIDSSLLILTRDSPFTIGRALYPFKIPIHFSNSSFSFATSFIFSVAPQPNLLPGHGFAFLFTPFTGINGTSSAQHLGLFNFTNNGSPNNHVFAVEFDSFQNQEFNDTNDNHVGVDLNSLESTVSSAAGFWSGPDDAEFKVLKINNGETYQVWVDCLDSLVNITMAELGMKRPRRPLISLSVNFSGLLLDEMYVGFTAATGQLVQSHKILSWSFSTSNLSIADSLLITNLPSFVPQKEDATFESIAFILGITLGGAGLVIICSFVIYVAVVVKRRGRKKPKDDEIEDWELEYWPHRFAYEDVYEATDGFSEANVIGFGRNGKVYKGTLGRSKVAVKRISVEVESGMREFVAEISSLGRLQHRNLVKLIGWCKKEKGSLILMYDYMENGSLDKKLFECDENEMLSWEKRIKVLRDVATGLLYLHQGWDSKVLHRDIKANNVLLDKDMNARLGDFGLARMQPHERTADTTRVMGTVGYMAPEVVRTGRVSAQADVFGFGVLVLEVVCGRRAIEEGKPWLIDWVRGLVERNEIGLAVDERLKVEGISGNEIDEMERMVCLGLLCAHNEAGARPTMQQVVNILCERNGNGSNDGLLNRLRSTRILSEIYQGNNFQQHHPTFEEIKTSSSSTSLIESDILRSGR 1130
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2951948 2959900 - ClCG07G002850.1 Cla07g00266 276254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00266 1130 SUPERFAMILY Concanavalin A-like lectins/glucanases 465 708 IPR013320 -
Cla07g00266 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Cla07g00266 1130 CDD lectin_legume_LecRK_Arcelin_ConA 473 708 IPR001220 GO:0030246
Cla07g00266 1130 Pfam Legume lectin domain 27 263 IPR001220 GO:0030246
Cla07g00266 1130 Pfam Legume lectin domain 473 709 IPR001220 GO:0030246
Cla07g00266 1130 ProSitePatterns Protein kinases ATP-binding region signature. 806 827 IPR017441 GO:0005524
Cla07g00266 1130 Pfam Protein tyrosine and serine/threonine kinase 358 470 IPR001245 GO:0004672|GO:0006468
Cla07g00266 1130 CDD lectin_legume_LecRK_Arcelin_ConA 27 262 IPR001220 GO:0030246
Cla07g00266 1130 SUPERFAMILY Protein kinase-like (PK-like) 333 470 IPR011009 -
Cla07g00266 1130 ProSitePatterns Protein kinases ATP-binding region signature. 360 381 IPR017441 GO:0005524
Cla07g00266 1130 Gene3D - 471 718 - -
Cla07g00266 1130 Gene3D - 25 272 - -
Cla07g00266 1130 ProSiteProfiles Protein kinase domain profile. 800 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00266 1130 Gene3D Phosphorylase Kinase; domain 1 339 429 - -
Cla07g00266 1130 Gene3D Phosphorylase Kinase; domain 1 785 875 - -
Cla07g00266 1130 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 17 469 - -
Cla07g00266 1130 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 477 1121 - -
Cla07g00266 1130 SMART serkin_6 800 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00266 1130 SUPERFAMILY Protein kinase-like (PK-like) 776 1070 IPR011009 -
Cla07g00266 1130 ProSiteProfiles Protein kinase domain profile. 354 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00266 1130 PANTHER - 17 469 - -
Cla07g00266 1130 PANTHER - 477 1121 - -
Cla07g00266 1130 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 268 IPR013320 -
Cla07g00266 1130 Pfam Protein kinase domain 801 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00266 1130 Gene3D Transferase(Phosphotransferase) domain 1 876 1082 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00570 Cla-Chr3:6366300 Cla07g00266 Cla-Chr7:2951948 2.87E-173 dispersed
Cla06g01695 Cla-Chr6:30553401 Cla07g00266 Cla-Chr7:2951948 1.21E-95 dispersed
Cla07g00266 Cla-Chr7:2951948 Cla08g00124 Cla-Chr8:2471660 3.09E-84 dispersed
Cla07g00266 Cla-Chr7:2951948 Cla10g02025 Cla-Chr10:36020308 6.09E-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80673 PF00069 Pkinase 6.20E-44 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00266 - - csv:101216388 1157.9