Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00286 ATGGTGGGCTCTGAGGAGGACTCTGGTACTTCTGGGGCTGCGGCGGTGCAGCTCTCTGGCAGTCGGAAAATGTTCTGGCGCTCGGCTTCATGGTCTGCATCACGTTCCTCACTTCACCATCCTGAAGTGAACAGAGAAGGTGGAGACCCCAATGGGAATCTTGGTGATAGTAATGGACCAAGCCGAATTTTCCCTGCTCCATTAACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTTTACAGCCTTTGTCGATTGCTCGGCGAAGCTTAGATGAATGGCCGAAGGCGGGGTCAGATGATATCGGCGAGTGGCCACAACCTCCTACTCCGAGTGGCAGAGGAAATGGCGAGAGGTTGAAACTTGATTTGTCGACAATTCAGAGAAATCCAGAAAAGAACTGTGGGCTGGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGTTCAAAAGTGGCGGAACATGTATATCTTGGTGGTGATGCGGTTGCTCGAGATAGGGATATACTTAAACATAATGGAATTACTCATGTGTTGAATTGTGTAGGATTCGTATGCCCGGAGTACTTCAAAGATGATTTTGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCTGAGGATATTACTAGTATTCTTTATGATGTTTTTGACTACTTTGAAGATGTTAGGGAAAAAAATGGTAGGGTTTTTGTTCATTGTTGCCAAGGAGTATCACGGTCGACGTCCTTGGTGATTGCCTATCTGATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTGAAGGCAGCCAGAGGTATTGCTGACCCGAACATGGGTTTTGCTTGCCAGTTATTGCAGTGCCAAAAGCGGGTCCATGCTTTTCCTCTTAGCCCAAGTTCACTGTTGAGGATGTACAGAATTGCTCCACACTCACCTTATGATCCTTTGCATTTGGTCCCCAAAATGTTAAATGATCCTTCGCCCTCAGCTCTGGATTCTAGAGGTGCATTTATCATTCATATACCCTCTGCCATATTTGTTTGGATTGGTAAAAACTGCGAAGCTATCATGGAAAGAGATGCGAGGGGAGCTGTTGTGCAGATTGTTCGGTATGAGAGAGTCCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAACAAACTTTTGGGATTCTTTTGCAAACCTATTACCTTTAATGGATAAATCTAACAGTAAAGTTAATCTTGGGGAATTAAAAGTTAAGCCTTATCCAGGGGAGAGGAAAGTTGATTCCTATGATGTGGATTTTGAAATTTTTCAGAAGGCTATTACTGGTGGTTTCGTACCTCCATTTCCTTCATCTGAAAATGAGCATGAAACCCATCTTCCTGTTAGAGAAAGCAGTTGGAGTGTACTTAGGCGTAAGTTTGCCTCTGGAAATATGAAAGAGTTTGTATCAGCTCCTCGAATATCGCTTTCTAGGGTCTATTCAGACTCGTTGATGATGATGCATTTTTCTGCAAAATCTTCATCACCTTCAGCATTTTCTTTATCGTCATCATCTTCTTCTCCTATCTATCTTTCGCCGGACTCTCTCTCTTCTGATTCAAGTTCAAGTTCAAGTTCCAAGTATTTTTCAGAATCTTCTTTAGATTCTCCATCTGCTTCTTCACCTTCAGTTCCAGTTTCCTCATCTCTGTCTAGTTTTTCTAGCATGTCTCTTACCTCATCCAATAGTTCCTCAGAACCTATGCCCAATGGTCCAGAAACTAATGATGCAGTCCCTTTGGAATCAAGTTCTCGCCCATTCTCATTCCCATCTAAAAAGTTCTCACCTTCTCTCGCAGAACGTCGAGGTACTGCAAAATCTCTGACATTGCCTGCAATGCCTAGTAAAATCAAAGCAACAAATAGTGCCTCAAGGTTTCTCGCCACTCAAGAAGATTTAAAGAGGAAAAACAAGACTTCTTACCCTCTTAATGTATCAATTAATATGAAAAATGGCTCAGAGCATATGGATAGGGTTGAAAATGAACAAACAAGTTCCACTCAGAAGTTCAAGAATATTGAAAATGGAATGGACGTAAGGGTAGGTAGTGTGGCCTCGTGCCAGCAGGAAACTAAAGTTGCCGGACAATCTGCTGGTTCCTGGAAAAGCTATCCCAAACTTTTTGGAGAAGGCATGGTATCCAATGTGTCAAATGGAAAGCAAGATGATGAATTTGTGCAACCTATGGTATACTGTTGGCCGGAGTTGGAAAAGATTGCAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTGTAGTGATTTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTATATTTGGGTAGGAAGTTCTTTTGACCATGATTTATCACAGGTTCATGTAAAGAGGGATAAAGACTTGGTTGATTTAGAACAGATAGACTGGGTTAAAGTTGGTCAATATGTACTTACGGAAATAGGTCTACCAGAAAATACAGAAATTAAGGAGACGCTTGAAAATCCAAGTCGTTTTATAGCAAGTCTTAACAAAGTTGTACAGAGCTGTAACACCCCACCACGTAATTCAAAATTGATCTTGATCATCAAATCTTTCTTCAACTCCTCTTGGGTTCCATTTCTTTCCTCTCAATCTGAACCTATGTTGAAAAAGAAAATGACGTCTGCGAATGGCAAAACTGAAACCCGACAATTGGGTACCGAGGATCACATCGAATCCTGTGTCCTTTCAAAAAAGAAACACGATGTAAGTGCTAAGTGCTTCTCTGCACTCATCCACGGTCCTCAACGATGTGTTTCTTCCCAGGGTCGAATTCTCCCAATATTCTGGTATTCTCAAGGTGAAGCTGACAAGAAATTCATCGACTTCCTCTTCACCATACTTGCCCTTCCTGTTGGAACTGTGATTAGGCTTCTCACCACGCAACCCTTGCTTTGCCCCATCTCTAATCTCTACAGCAGTGTCAATGCCTTAGACAGTAGCTATTTTGAGTCTGACCAAAACAAAAACGACCTCCTCAAGCCCAAATCCTCTGTCACCTCATCTCAAGTCGGAAACCTTTTGCAAATTGAATCTTCATCGATAAAAGCCTATTATCGTTGTTCTTGTAACACTTGCCGAACGTATTTTACCGCTACACGTGGCGCGAGATGTCCTGGATGCAGGCTGGGGATGTTCCACCGTGCAGAATATGTATATGGAGCTAAAGAAGAAAGGCCGACTGAGACAGGATACGTAAAAGAAAATGTGATGTACATGGTGATGGATCATCTTACTCTCAAACCCATGTCCTTCATTTACACCATTTCTGTGTTGAATGCCTTTAATGTTGACGTCGCACAGATTGAGGAAAAGGTTATAGACTTGGACATGACACAGAGTTTAAGGTTGCTAAGGGCTTCTCTGCACTCATCCAATGTGCTCACTGAAACGTTCTATCACAAGTTAGTCTTCACAAGTCAGCATCCAAGAATGTAA 3492 42.44 MVGSEEDSGTSGAAAVQLSGSRKMFWRSASWSASRSSLHHPEVNREGGDPNGNLGDSNGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSTIQRNPEKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKHNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPTNFWDSFANLLPLMDKSNSKVNLGELKVKPYPGERKVDSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSVLRRKFASGNMKEFVSAPRISLSRVYSDSLMMMHFSAKSSSPSAFSLSSSSSSPIYLSPDSLSSDSSSSSSSKYFSESSLDSPSASSPSVPVSSSLSSFSSMSLTSSNSSSEPMPNGPETNDAVPLESSSRPFSFPSKKFSPSLAERRGTAKSLTLPAMPSKIKATNSASRFLATQEDLKRKNKTSYPLNVSINMKNGSEHMDRVENEQTSSTQKFKNIENGMDVRVGSVASCQQETKVAGQSAGSWKSYPKLFGEGMVSNVSNGKQDDEFVQPMVYCWPELEKIAAFDTSYLNSKAAVVIFSPSRYLGKKDDMMLYIWVGSSFDHDLSQVHVKRDKDLVDLEQIDWVKVGQYVLTEIGLPENTEIKETLENPSRFIASLNKVVQSCNTPPRNSKLILIIKSFFNSSWVPFLSSQSEPMLKKKMTSANGKTETRQLGTEDHIESCVLSKKKHDVSAKCFSALIHGPQRCVSSQGRILPIFWYSQGEADKKFIDFLFTILALPVGTVIRLLTTQPLLCPISNLYSSVNALDSSYFESDQNKNDLLKPKSSVTSSQVGNLLQIESSSIKAYYRCSCNTCRTYFTATRGARCPGCRLGMFHRAEYVYGAKEERPTETGYVKENVMYMVMDHLTLKPMSFIYTISVLNAFNVDVAQIEEKVIDLDMTQSLRLLRASLHSSNVLTETFYHKLVFTSQHPRM 1163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3145477 3159303 + ClCG07G003050.2 Cla07g00286 276274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00286 1163 ProSitePatterns Tyrosine specific protein phosphatases active site. 237 247 IPR016130 GO:0016311|GO:0016791
Cla07g00286 1163 Gene3D Protein tyrosine phosphatase superfamily 136 295 IPR029021 -
Cla07g00286 1163 MobiDBLite consensus disorder prediction 570 620 - -
Cla07g00286 1163 SUPERFAMILY Actin depolymerizing proteins 300 401 - -
Cla07g00286 1163 SMART dsp_5 153 292 IPR020422 GO:0006470|GO:0008138
Cla07g00286 1163 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 295 IPR020422 GO:0006470|GO:0008138
Cla07g00286 1163 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 839 - -
Cla07g00286 1163 Pfam Protein of unknown function (DUF674) 953 1153 IPR007750 -
Cla07g00286 1163 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 148 294 IPR029021 -
Cla07g00286 1163 MobiDBLite consensus disorder prediction 29 78 - -
Cla07g00286 1163 Gene3D Severin 304 399 IPR029006 -
Cla07g00286 1163 MobiDBLite consensus disorder prediction 570 604 - -
Cla07g00286 1163 PANTHER MKPA PROTEIN 1 839 - -
Cla07g00286 1163 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 273 IPR000387 GO:0016311|GO:0016791
Cla07g00286 1163 SMART VILL_6 305 399 IPR007122 GO:0051015
Cla07g00286 1163 MobiDBLite consensus disorder prediction 100 120 - -
Cla07g00286 1163 CDD DSP 154 288 - -
Cla07g00286 1163 Pfam Dual specificity phosphatase, catalytic domain 161 291 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02597 Cla-Chr5:37222167 Cla07g00286 Cla-Chr7:3145477 5.81E-177 dispersed
Cla06g01782 Cla-Chr6:31232675 Cla07g00286 Cla-Chr7:3145477 1.48E-21 dispersed
Cla07g00286 Cla-Chr7:3145477 Cla09g02029 Cla-Chr9:37875477 1.77E-13 dispersed
Cla07g00286 Cla-Chr7:3145477 Cla07g00287 Cla-Chr7:3164216 8.61E-11 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00286 - - csv:101223210 1465.29