Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00295 ATGGAGGGTTTTGTGAGGTTTTTGGGTTTGGCAAAGCCATATTTTGGAGTTCTTTTTATGCAATTTGGTTCGGCTGGAATGGCAATTCTTGCAAAGTTTGCTTTGAACAAAGGGATGAGCCAATATGTTTTTGTGTTTTATCGTATGATTATCGCTACTATTATTATTGCTCCTTTTGCCATCATATTTGAAAGGTCCTTTATTATCCCTTTCTTTCTCTTTATCTATTTACGTACGTACTTACCAACCATGAAAGTGAAGACAAAGATGACCATTCCGTTGGTCTTCAAGATTGTGATGTTGGGTTTATTAGAGCCAGTGATTGATCTCAACTTATACTTTACTGGGATGAAGTATACAACAGCAACCTTTGCAGTTGCCATGTGCAATGTTCTACCAGCTTTTGCTTTCCTCATGGCTTGGGCTTGCAGTGTTGGGTTTTATGTTTTGTGGATGAAAGCTTTTCAAAGTAACCCTTTTTGTTGTCTCCCAAAGTACATTATTGCATGTCACATGCTTGAGAGAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATCCTAGGAACCATAGTAACAGTAGGAGGAGCCATGATTATGACTTTCATTAGAGGACCCATGTTGAATCTGCCATGGACAAAAGCCAACCATCCCTCTGCTTCTTCTTCAACTGCTTCAATAAATCACCAAGACCAAATCAAGGGCTCCCTCATGATTGCAATTGGCTGCATTTGCCAGTCAGCTTTCATCATTCTTCAGGCGATTACATTGAAATTGTACCCAGCTGAGCTGTCTCTTACAGCATTGATATGCTTGGTGGCCACCATTGGAGGCTGTGTGGTTGCTTCGGTCATGGAAAGAGGGAACCCTTCTGCTTGGGCTTTGCATTTTGATAGCCAGCTTCTATCTGTGGTTTACGCTGGAGTAATATGTTCAGGGGTAACATATTATATTCAAGGAATGGTGATGCAAATAAAAGGGCCTGTTTTTGTCACTGCATTCAATCCTCTGTCCATGATTTTTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATTATGTTGCTGGGCAGGATTATTGGAGCAGTGACCATAATCACTGGGTTGTACCTAGTTCTGTGGGGCAAAAGAAAAGATCAACTTTCAGTTAAATCAGACTGTGATAACATAGCACATGAGGAAGACAAATTGATGAGTCCTAAGCCACATGTAATTGTCCTGGTATCTGTTAATGTGTTTAAAGTACCCTGCATTTTCATTTCAACCAAAATGTATTTGTAA 1281 40.05 MEGFVRFLGLAKPYFGVLFMQFGSAGMAILAKFALNKGMSQYVFVFYRMIIATIIIAPFAIIFERSFIIPFFLFIYLRTYLPTMKVKTKMTIPLVFKIVMLGLLEPVIDLNLYFTGMKYTTATFAVAMCNVLPAFAFLMAWACSVGFYVLWMKAFQSNPFCCLPKYIIACHMLERVNILKRGSQAKILGTIVTVGGAMIMTFIRGPMLNLPWTKANHPSASSSTASINHQDQIKGSLMIAIGCICQSAFIILQAITLKLYPAELSLTALICLVATIGGCVVASVMERGNPSAWALHFDSQLLSVVYAGVICSGVTYYIQGMVMQIKGPVFVTAFNPLSMIFVAIMSSFILSEIMLLGRIIGAVTIITGLYLVLWGKRKDQLSVKSDCDNIAHEEDKLMSPKPHVIVLVSVNVFKVPCIFISTKMYL 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3279749 3284998 - ClCG07G003190.2 Cla07g00295 276283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00295 426 Pfam EamA-like transporter family 234 373 IPR000620 GO:0016020|GO:0016021
Cla07g00295 426 Pfam EamA-like transporter family 14 142 IPR000620 GO:0016020|GO:0016021
Cla07g00295 426 PANTHER WAT1-RELATED PROTEIN 9 144 - -
Cla07g00295 426 PANTHER WAT1-RELATED PROTEIN 166 389 - -
Cla07g00295 426 SUPERFAMILY Multidrug resistance efflux transporter EmrE 292 378 - -
Cla07g00295 426 PANTHER WAT1-RELATED PROTEIN 9 144 IPR030184 GO:0016021|GO:0022857
Cla07g00295 426 PANTHER WAT1-RELATED PROTEIN 166 389 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00295 Cla-Chr7:3279749 Cla09g01961 Cla-Chr9:37221332 4.86E-136 dispersed
Cla07g00295 Cla-Chr7:3279749 Cla07g00296 Cla-Chr7:3322165 9.06E-178 tandem
Cla04g00834 Cla-Chr4:23381317 Cla07g00295 Cla-Chr7:3279749 8.57E-110 wgd
Cla07g00295 Cla-Chr7:3279749 Cla09g01959 Cla-Chr9:37161261 3.82E-112 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00295 - - csv:101206072 578.941