Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00296 ATGGAGAGTTTTGTAAGGTTTTTGGGTTCGGCAAAACCGTATTTTGGAGTGATTTTTATACAGTTTGGTTATGCTGGAATGACGATTCTTACAAAATCAGCTTTAAACAAAGGGATGAGCCAATATATTTTTGTGGTTTATCGTCAAGTTGCTGCTACTCTTGTCATGGCTCCTTTTGCCATTATCTTTGATAGGTCCTTTCTTATTCATTCTTTCTCTTTGGAAGGCGAGGACAAAGATGTCCTTTTCATTGTTCTTCAAGATTTTGATTCTGGGTTTCTTAGAGTAAGAAGGCTGCCAGTAATTGATCAAAACTTATTCTATACTGGTATGAAGTACACAACAGCAACTTTTGCATCGGCCATGTGCAATGTTCTTCCAGCTTTTGTTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATCCTAGGAACCATAGTAACAGTAGGAGGAGCCATGATTATGACCTTCATAAAAGGGCCAATGTTGAATTTACCATGGACAAAATTACCCAATCACCCCTCTGCTTCTTCTTCATCAGCTTCTTCTCCAAATCACCAAAGCACAATCATGGGCTTCCTCATGATTGCAACTGGCTGCATTTGCTGGTCAGCTTTCATCATTCTTCAGGCGATTACGTTGAAATCGTACCCGGCCGAGCTATCGCTTACAGCATTGATATGCTTGGTTGGCACCATTGGAGGCTCTGGGTTTGCTTTGATCATGGAGAGGGGGAACCCTTCTGCTTGGGCTTTGCACTTTGACAGCCAGCTTCTAGCTGTGGTTTATTCTGGTGTAATATGTTCAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGGCCTGTTTTTTTCTCTGCATTCAATCCTCTGTCCATGATTCTTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATTATGTTGTTGGGAAGGATTGTTGGAGCAGTGGTCATAATCATTGGCTTGTACCTTGTTTTGTGGGGGAAAACCAAAGATCAGCCTTCAATACTTAAATCAGAATGTGATAAGATAACACCTTGTGAGCAACAAATGATCACTGCAAATGATGAGGCTTCCAAGATGACGATGGCGGTTCGATCGAGTCAAGAATTCGTCGCGCTTGATGTTGAAAAAGAGGAGAGAAATTGA 1194 41.46 MESFVRFLGSAKPYFGVIFIQFGYAGMTILTKSALNKGMSQYIFVVYRQVAATLVMAPFAIIFDRSFLIHSFSLEGEDKDVLFIVLQDFDSGFLRVRRLPVIDQNLFYTGMKYTTATFASAMCNVLPAFVFLMAWACRLEKVNILKRGSQAKILGTIVTVGGAMIMTFIKGPMLNLPWTKLPNHPSASSSSASSPNHQSTIMGFLMIATGCICWSAFIILQAITLKSYPAELSLTALICLVGTIGGSGFALIMERGNPSAWALHFDSQLLAVVYSGVICSGVTYYIQGVVMQTKGPVFFSAFNPLSMILVAIMSSFILSEIMLLGRIVGAVVIIIGLYLVLWGKTKDQPSILKSECDKITPCEQQMITANDEASKMTMAVRSSQEFVALDVEKEERN 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3322165 3328288 - ClCG07G003210.1 Cla07g00296 276284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00296 397 PANTHER WAT1-RELATED PROTEIN 9 353 IPR030184 GO:0016021|GO:0022857
Cla07g00296 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 263 346 - -
Cla07g00296 397 PANTHER WAT1-RELATED PROTEIN 9 353 - -
Cla07g00296 397 Pfam EamA-like transporter family 14 166 IPR000620 GO:0016020|GO:0016021
Cla07g00296 397 Pfam EamA-like transporter family 202 341 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00834 Cla-Chr4:23381317 Cla07g00296 Cla-Chr7:3322165 9.84E-132 dispersed
Cla07g00296 Cla-Chr7:3322165 Cla09g01961 Cla-Chr9:37221332 5.87E-135 dispersed
Cla07g00295 Cla-Chr7:3279749 Cla07g00296 Cla-Chr7:3322165 9.06E-178 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00296 - - bhj:120081745 615.15