Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00325 ATGGCGAATCGATGGTGGGCTGAAAATATACCCACCACCACGGACAGCAGTACCAGCAACCCTTATTCGACTCCATTAAAGCAAAGCTTAGAAGCTGCTGATGAAGAGAACAACTCGGGAAGCCATGAGAGAGCTGAACCAGGCACCAGTTCAAGCACGCGCCGCCCTCGTGGCCGGCCGCCGGGATCTAAGAACAAGCCGAAGCCACCGGTGGTTGTAACGAAGGAGAGCCCCGATGCCCTCCGGAGCCACGTTTTGGAAATAGGCAGCGGCAGTGACATCGTTGAAAGCATCTCGAACTTCGCCCAGCGCCGGCAGCGAGGAGTTTCAGTTCTTAGCGGAAATGGGGTTGTCGCCAATGTAACTCTCCGGCATCCGGCGGCCCCAGGCGGCGTTATTACACTACAAGGTCGATTTGATATACTGTCGCTCTCTGGTGCTTTTTTGCCTGCCCCAGCTCCGCCGGGTGCAACTGGGTTAACTGTCTACTTGGCTGGCGGACAGGGGCAGGTCGTTGGTGGCATTGTTGTCGGTGCACTTGTTGCAACCGGTCCAGTCATCGTCATCGCTGCCACTTTCACCAATGCAACATTCGAGCGGCTGCCGCTTGAGGACGAGGAGGTGGCTGCGGGAGACAAGTCTGGGACTAGTCAGAACAATTCAACTTCTCAGAGCATGGGGGAGCAACAGCAACAGCAGCAACAACAGCAACAGCAGCCTTCAATGGGAGTTTACAATATGGGTCCAAACTTGGTGCCAAATGGTCAGGTTTCTTCACATGATGTGTTTTGGAGTCCTCCTAGAGCCCCACCTCCATTTTAA 822 54.87 MANRWWAENIPTTTDSSTSNPYSTPLKQSLEAADEENNSGSHERAEPGTSSSTRRPRGRPPGSKNKPKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPAAPGGVITLQGRFDILSLSGAFLPAPAPPGATGLTVYLAGGQGQVVGGIVVGALVATGPVIVIAATFTNATFERLPLEDEEVAAGDKSGTSQNNSTSQSMGEQQQQQQQQQQQPSMGVYNMGPNLVPNGQVSSHDVFWSPPRAPPPF 273
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3777463 3778284 - ClCG07G003540.1 Cla07g00325 276313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00325 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 195 IPR005175 -
Cla07g00325 273 MobiDBLite consensus disorder prediction 1 35 - -
Cla07g00325 273 Gene3D - 81 210 - -
Cla07g00325 273 MobiDBLite consensus disorder prediction 207 273 - -
Cla07g00325 273 PIRSF ESCAROLA 7 271 IPR014476 GO:0003680
Cla07g00325 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 272 - -
Cla07g00325 273 MobiDBLite consensus disorder prediction 212 261 - -
Cla07g00325 273 ProSiteProfiles PPC domain profile profile. 78 216 IPR005175 -
Cla07g00325 273 MobiDBLite consensus disorder prediction 1 78 - -
Cla07g00325 273 MobiDBLite consensus disorder prediction 43 58 - -
Cla07g00325 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 272 IPR014476 GO:0003680
Cla07g00325 273 CDD DUF296 82 165 IPR005175 -
Cla07g00325 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 208 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla07g00325 Cla11g00643 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01662 Cla-Chr2:31457488 Cla07g00325 Cla-Chr7:3777463 1.12E-81 dispersed
Cla06g01429 Cla-Chr6:27866233 Cla07g00325 Cla-Chr7:3777463 1.46E-66 dispersed
Cla07g00325 Cla-Chr7:3777463 Cla09g01139 Cla-Chr9:12782911 4.89E-64 dispersed
Cla11g00643 Cla-Chr11:7363514 Cla07g00325 Cla-Chr7:3777463 7.14E-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00325 - - csv:101217530 412.92