Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g00381 | ATGGAGGGGAAGGAGGAAGATGTCCGACTGGGAGCCAACAAGTTCAACGAGAGGCAGCCCATTGGGACGGCGGCGCAGAGCCAGGACGACGCCAAGGACTACAAGGAGCCACCACCGGCGCCTCTGTTCGAGCCAGACGAGCTCACTTCATGGTCCTTTTACAGAGCTGGAATCGCAGAGTTTTTCGCCACTTTCCTCTTCCTTTACATCACCGTTTTGACCGTCATGGGGGTCGTCCGGTCCAACGAAGCCAACGGCAACACCTGTAAGACCGTCGGGATTCAGGGGATTGCTTGGGCTTTCGGGGGTATGATTTTTGCTCTGGTTTACTGTACTGCTGGAATCTCCGGTGGCCACATTAACCCGGCAGTGACTTTTGGGCTGTTTCTGGCGAGAAAGCTGTCGTTGACCAGGGCGATTTTCTACATAGTGATGCAGTGCCTTGGTGCTATCTGCGGAGCCGGCGTGGTGAAGGGATTCCAACCCAAGCCCTACGAAAGGCTCGGCGGTGGAGCGAATGTTGTGAACAGTGGGTACACCAAAGGAGATGGGCTGGGCGCCGAGATCGTGGGTACTTTCATCCTTGTTTACACCGTCTTCTCCGCCACGGACGCCAAACGCAGCGCCAGAGACTCGCATGTTCCGATTTTGGCACCACTACCAATTGGGTTTGCAGTGTTCTTAGTCCACTTGGCCACCATTCCGATCACCGGCACGGGCATTAACCCAGCCAGGAGTTTGGGAGCAGCCATCATCTTCAACCAGGACAAAGCATGGGACGATCACTGGATATTCTGGGTTGGACCATTCATCGGAGCAGCATTGGCAGCTTTATACCATCAAGTGGGAAAGGAAGAAGATGTCCGATTGGGAGCCAACAAGTTCAACGAGAGGCAGCCCATTGGGACGGCGGCGCAGAGCCAGGACGACGCCAAGGACTACAAGGAGCCACCACCGGCGCCTCTGTTCGAGCCAGACGAGCTCACTTCATGGTCCTTTTACAGAGCTGGAATCGCAGAGTTTTTCGCCACTTTCCTCTTCCTTTACATCACCGTTTTGACCGTCATGGGGGTCGTCCGGTCCAACGAAGCCAACGGCAACACCTGTAAGACCGTCGGGATTCAGGGGATTGCTTGGGCTTTCGGGGGTATGATTTTTGCTCTGGTTTACTGTACTGCTGGAATCTCCGGTGGCCACATTAACCCGGCAGTGACTTTTGGGCTGTTTCTGGCGAGAAAGCTGTCGTTGACCAGGGCGATTTTCTACATAGTGATGCAGTGCCTTGGTGCTATCTGCGGAGCCGGCGTGGTGAAGGGATTCCAACCCAAGCCCTACGAAAGGCTCGGCGGTGGAGCGAATGTTGTGAACAGTGGGTACACCAAAGGAGATGGGCTGGGCGCCGAGATCGTGGGTACTTTCATCCTTGTTTACACCGTCTTCTCCGCCACGGACGCCAAACGCAGCGCCAGAGACTCGCATGTTCCGATTTTGGCACCACTACCAATTGGGTTTGCAGTGTTCTTAGTCCACTTGGCCACCATTCCGATCACCGGCACGGGCATTAACCCAGCCAGGAGTTTGGGAGCAGCCATCATCTTCAACCAGGACAAAGCATGGGACGATCACTGGATATTCTGGGTTGGACCATTCATCGGAGCAGCATTGGCAGCTTTATACCATCAAGTGGTGATTAGAGCCATTCCCTTCAAGTCCAAGTGA | 1719 | 54.86 | MEGKEEDVRLGANKFNERQPIGTAAQSQDDAKDYKEPPPAPLFEPDELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEANGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQPKPYERLGGGANVVNSGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNQDKAWDDHWIFWVGPFIGAALAALYHQVGKEEDVRLGANKFNERQPIGTAAQSQDDAKDYKEPPPAPLFEPDELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEANGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQPKPYERLGGGANVVNSGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNQDKAWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSK | 572 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4593508 | 4601728 | - | ClCG07G004040.1 | Cla07g00381 | 276369 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g00381 | 572 | CDD | MIP | 335 | 563 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | Gene3D | Glycerol uptake facilitator protein. | 40 | 293 | IPR023271 | - | |
Cla07g00381 | 572 | Gene3D | Glycerol uptake facilitator protein. | 320 | 571 | IPR023271 | - | |
Cla07g00381 | 572 | TIGRFAM | MIP: MIP family channel proteins | 59 | 280 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | TIGRFAM | MIP: MIP family channel proteins | 339 | 560 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | CDD | MIP | 55 | 282 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | SUPERFAMILY | Aquaporin-like | 327 | 565 | IPR023271 | - | |
Cla07g00381 | 572 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 282 | IPR034294 | - | |
Cla07g00381 | 572 | PANTHER | AQUAPORIN PIP1-2-RELATED | 284 | 572 | - | - | |
Cla07g00381 | 572 | PANTHER | AQUAPORIN PIP1-2-RELATED | 1 | 282 | - | - | |
Cla07g00381 | 572 | PRINTS | Major intrinsic protein family signature | 335 | 354 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | PRINTS | Major intrinsic protein family signature | 543 | 563 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | PRINTS | Major intrinsic protein family signature | 418 | 437 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | PRINTS | Major intrinsic protein family signature | 381 | 405 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | PRINTS | Major intrinsic protein family signature | 503 | 525 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | PRINTS | Major intrinsic protein family signature | 467 | 485 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 284 | 572 | IPR034294 | - | |
Cla07g00381 | 572 | Pfam | Major intrinsic protein | 327 | 560 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | Pfam | Major intrinsic protein | 47 | 280 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g00381 | 572 | SUPERFAMILY | Aquaporin-like | 47 | 282 | IPR023271 | - | |
Cla07g00381 | 572 | ProSitePatterns | MIP family signature. | 119 | 127 | IPR022357 | - | |
Cla07g00381 | 572 | ProSitePatterns | MIP family signature. | 399 | 407 | IPR022357 | - | |
Cla07g00381 | 572 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00255 | Cla-Chr1:2586172 | Cla07g00381 | Cla-Chr7:4593508 | 1.43E-171 | dispersed | |
Cla04g00884 | Cla-Chr4:23832679 | Cla07g00381 | Cla-Chr7:4593508 | 0 | dispersed | |
Cla07g00381 | Cla-Chr7:4593508 | Cla10g02079 | Cla-Chr10:36478749 | 9.00E-144 | dispersed | |
Cla07g00380 | Cla-Chr7:4586834 | Cla07g00381 | Cla-Chr7:4593508 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g00381 | K09872 | - | csv:101215145 | 575.859 |