Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00388 ATGGCTTTTTTCTCCTTCTTCTTCTTCCTCTTTTCCTCTGTTTTAGCTTCTTCTCTGTTTTTTCTCTTCCTCCGCCCCACCAGATTCCGCCGTGTGCGGCTGCCGCCGGGGACACTCGGCCTTCCCTTGATCGGGGAGACCCTTCAGCTCATCTCCGCCTACAAGACCGAGAACCCTGAACCCTTCATCGACGAGCGGGTGCGTAGATTTGGACCGGTTTTTACCACCCATTTGTTCGGTGAGCCGACGGTTTTCTCAGCCGATTGGGAAACCAACCGGTTCATTCTTCAGAATGAGGAGAAGCTTTTTGAGTGTAGTTACCCCGGTTCCATTTCTAACCTACTTGGAAGGCATTCTTTGTTGCTTATGAAAGGGAGTTTACATAAAAGAATGCATTCTTTGACTATGAGCTTTGGGAACTCTTCCATTATTAGAGACCATCTTTTGGTCGACGTCGACCGCTTGATTCGGCTTAATTTGAACTCTTGGACCGGCCGGATCTTCCTCATGGAAGAAGCTAAAAAGATAACATTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGTTGCGAATGGACTCAAAATCTCATGAAAGAATATCTTCTTGTGATTGAAGGATTTTTTACCGTCCCTCTCCCTCTCTTCTCATCTACTTACCGTCGAGCCATCCAGGCACGGAGGAAGGTGGCGGAGCAATTGGGGACAGTGGTGCGGGAGCGGAGGAAAGAGAGCGAGAATGGAGCGAGGAAGAAGGACATGCTCGGAGCACTGCTCGCCGGAGAAGATGCCCTCTCCGACGAGCAAATAGTAGATTTCTTACTGGCTTTATTGGTGGCGGGATATGAAACGACGTCAACTACCATGACGCTCGCCGTTAAGTTTCTGACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCATGAGCAAATCAAAGCAAGAAAGAAGGAATCAGACCAACAACACCTCCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTGAATGAAACATTAAGAGTTGCCAACATAATCAGTGGCGTATTCAGGAGGACAATGACAGACGTAAATATCAAAGGTTACACGATTCCAAAAGGATGGAAGGTTTTTGCATCATTTCGTGCAGTACATTTGGACCATGAGCATTTCAAAGATGCTCGCACTTTTAACCCATGGAGATGGCAAAAGAATAGCTCGGGGGCAACGACGCTAAATGCATTTACACCGTTTGGTGGAGGTCCAAGATTATGCCCAGGTTACGAGCTGGCCAGAGTAGAACTCTCTGTTTTCCTTCATCATCTTGTCACCCAATTTAGTTGGGTTCCAGCAGAAGATGATAAGTTAGTATTTTTCCCAACAACAAGAACACAGAAGCGCTATCCTATATATGTGACTCGTAAGAATGAAACTACACAATGTAAAGACAGTCATCTGGACACATGA 1458 46.5 MAFFSFFFFLFSSVLASSLFFLFLRPTRFRRVRLPPGTLGLPLIGETLQLISAYKTENPEPFIDERVRRFGPVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGRHSLLLMKGSLHKRMHSLTMSFGNSSIIRDHLLVDVDRLIRLNLNSWTGRIFLMEEAKKITFELAVKQLMSFDRCEWTQNLMKEYLLVIEGFFTVPLPLFSSTYRRAIQARRKVAEQLGTVVRERRKESENGARKKDMLGALLAGEDALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHEQIKARKKESDQQHLQWNDYKSMPFTQCVVNETLRVANIISGVFRRTMTDVNIKGYTIPKGWKVFASFRAVHLDHEHFKDARTFNPWRWQKNSSGATTLNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFSWVPAEDDKLVFFPTTRTQKRYPIYVTRKNETTQCKDSHLDT 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4774307 4784087 + ClCG07G004110.1 Cla07g00388 276376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00388 485 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PRINTS E-class P450 group I signature 337 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PANTHER CYTOCHROME P450 26 11 471 - -
Cla07g00388 485 Coils Coil 303 323 - -
Cla07g00388 485 Pfam Cytochrome P450 209 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Cla07g00388 485 Gene3D Cytochrome P450 24 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00388 485 PANTHER CYTOCHROME P450 90A1 11 471 - -
Cla07g00388 485 SUPERFAMILY Cytochrome P450 28 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02039 Cla-Chr5:32102232 Cla07g00388 Cla-Chr7:4774307 1.36E-91 dispersed
Cla06g00385 Cla-Chr6:4730323 Cla07g00388 Cla-Chr7:4774307 1.30E-97 dispersed
Cla07g00388 Cla-Chr7:4774307 Cla07g01299 Cla-Chr7:30128051 9.92E-130 dispersed
Cla09g01896 Cla-Chr9:36661529 Cla07g00388 Cla-Chr7:4774307 8.83E-63 dispersed
Cla07g00388 Cla-Chr7:4774307 Cla09g00055 Cla-Chr9:546635 1.14E-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00388 K09588 - csv:101216594 860.522