Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00463 ATGTCCAAAGAAAGAGAGAGATTCGACGAGATAGCGAAGAAGATAAAGAGAGAGACAGATGTATCATCAAATATTCATCCCCAGCAAATTATGGGGAGAAGAACCTCATTGCAAGCTCCTCCTGGGACACTTAACACCATTACTCCATGTGCAGCCTGCAAGCTCTTAAGAAGAAGATGTGCTCAAGAATGCCCCTTCTCCCCATACTTCTCCCCTCATGAGCCTCATAAATTTGCCTCTGTCCACAAGGTTTTCGGCGCTAGCAACGTCTCCAAGATGCTCATGGAAGTTTCGGAGAATCAGAGAGCGGATGCTGCAAATAGCTTAGTTTATGAAGCTAATGTGAGGTTAAGAGATCCTGTTTATGGCTGTATGGGCGCCATTTCAGCCCTACAACACCAAATTCAAGCCTTACAAGCTGAGCTCAATGCAGTGAGAGCTGAGATTTTAAGACACAAATTTAGAGAAGCTAATAATATGATTCACTCTTCTCCTCAACAACAACATTTGCCTTTTCTTTCTTCTTCTACGGAGGTCGTTTCGGTCGCCGTGCCACCACCACCTCCGCCACCACCGCTACCTCCACCGCCTCATCATGATGCTTCTTCTTCTACTTCCTCCTTGTACAACCGACCGGTGGTGGCCGTGGCGGCTGATTATAGTACTATTTCAAGTGATGAAAATGTTCCCTACTTTGTTACTACTTCTAGTACTGCTCATCAATTGAATTCTTAG 735 45.17 MSKERERFDEIAKKIKRETDVSSNIHPQQIMGRRTSLQAPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVSENQRADAANSLVYEANVRLRDPVYGCMGAISALQHQIQALQAELNAVRAEILRHKFREANNMIHSSPQQQHLPFLSSSTEVVSVAVPPPPPPPPLPPPPHHDASSSTSSLYNRPVVAVAADYSTISSDENVPYFVTTSSTAHQLNS 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6349989 6351234 + ClCG07G004900.2 Cla07g00463 276451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00463 244 ProSiteProfiles LOB domain profile. 48 149 IPR004883 -
Cla07g00463 244 Pfam Lateral organ boundaries (LOB) domain 49 146 IPR004883 -
Cla07g00463 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 15 34 232 - -
Cla07g00463 244 Coils Coil 128 155 - -
Cla07g00463 244 MobiDBLite consensus disorder prediction 182 199 - -
Cla07g00463 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 232 - -
Cla07g00463 244 MobiDBLite consensus disorder prediction 177 208 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00463 Cla-Chr7:6349989 Cla10g01326 Cla-Chr10:28218498 5.76E-47 dispersed
Cla11g00556 Cla-Chr11:6297484 Cla07g00463 Cla-Chr7:6349989 1.30E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61393 PF03195 LOB 2.20E-40 No_clan Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00463 - - csv:101219425 409.838