Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00469 ATGGATGTTTTCAATATTCATTTCCAAAACACTTTGTCCTCCATTGAAGAACAACCTAGAAGGAATTTTGGACACCATTGTAGTTCACCTTGTGTTTGTTTGTGTGCATTCTTCTCTTCTTTGAAGAACAAAGGCCAAACGGGGAATACAGATGAGGGGTTTTCTCTTGGAGATCGAGATAAAGACGCTATGGATCTTGAGCATGGGAAGTGTTGGGATAGTTCAAAGAAGGATTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGCCTTGGTGTCGTCTATGGCGATTTGAGCATCTCTCCTCTTTACGTTTACAGAAGCACTTTTGCTGAAGACATCCAACATTCAGATACCAATGAAGAAATCTATGGTGTTCTTTCATTTGTCTTCTGGACTCTCACTATAGTCCCCCTTTTCAAATACGTCTTTGTGGTTCTCAGAGCTGATGACAATGGCGAAGGTGGGACTTTTGCTCTGTACTCGTTAATTTGTAGACATGCCAAAGTAAGCCTTCTCCCCAACAGACAAGTTGCAGATGAAGCTCTTTCCACTTACTTGCTGGAACATCCACCAGAGAAGAAGAAGCAATCTAAGGTTAAATTGCTGCTGGAGAAGCACAGAGCTCTTCACACTTCCTTGTTGATTCTTGTTCTTCTAGGTACTTGTATGGTGATTGGAGACGGGCTTCTCACTCCTGCCATTTCTGTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGTCCAAGGCTCACCATGAGTATGCAGTGGTTCCAATCACTTGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTACGGCACACATCGAGTTGGTTTTGTATTTGCCCCCATTGTATTGGCATGGCTACTCTGCATCAGCACCCTTGGCATATACAATATTATACACTGGAATCCACGTGTTTATCAGGCTCTTTCTCCATATTACATGTTCAAGTTTTTGGAGAAGACAAGGAAGAGCGGTTGGATGTCGTTGGGGGGTATATTGTTGTGTATAACAGGCTCGGAAGCGATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACTTTCCTGGTGTATCCAGCGCTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCACCATACCACCAAAAACATTGGCTTCTACGTTTCTGTTCCAGAGAGTGTGAGATGGCCAGTGCTTACAATTGCTATACTTGCGTCGGTTGTGGGAAGCCAAGCAATCATCAGCGGAACATTCTCCATTATTAACCAGAGCCAGTCCCTTGGGTGCTTCCCTAGGGTGAAGGTTGTTCATACTTCTGATAAGATCCATGGCCAGATATACATTCCAGAGATAAATTGGATTCTTATGATTCTCTGTGTCGCCGTTACCATTGGATTTAGGGACATAAAACACCTCGGAAATGCTTCAGGTCTGGCTGTAATGACTGTGATGCTTGTGACAACCTGTCTTACGTCTTTGGTGATTGTCCTGTGTTGGAACAAATCTCCACTCTTGGCCCTCTCCTTTTTGATTTTCTTTGGGTCTGTTGAATTGCTCTACTTCTCAGCTTCACTCACCAAGTTCAGGGAGGGCGCTTGGCTCCCCATTCTTTTAGCTCTCTTCCTCATGACCATCATGTTTGTTTGGCACTATGCAACCATCAAGAAGTATGAATTTGATCTCCACAACAAGGTTTCATTAGAATGGTTACTAGCATTGGGGCCAAGCCTTGGGATTGCACGTGTCCCCGGCATTGGATTAGTCTTCACTGATCTCACTTCTGGCATCCCTGCCAACTTCTCTCGGTTTGTCACCAACCTCCCGGCATTTCATCGGATTCTTGTCTTTGTATGCATAAAGTCAGTACCAGTTCCTTTTGTACCTCCAGCTGAGCGATATCTCGTGGGAAGAGTTGGCCCAGCTACGCATCGATCGTACAGGTGCATTGTTCGGTATGGCTACCGTGATGTTCACCAGGACGTGGACTCATTTGAGTCTGAATTAGTCACGAAACTTGCAGACTTCATCCACTATGATTGGTTCAGAAAGCAAAGAGGCAACTCTTGCAGTGAGGATGATGCATCCCGTTCAAATGAATCGACAAGTGAGTGCAAGCTGGCTGTGATTGGAACCATAGCATTTGCAGGTGCAACTGCCTATGAAGAGACTGTGCAGCCTGCAAGCGTATCAGTTGGGTTCCAAACTGTTGACAGCATCGGTGATGTGATTGAAATGGAGCCACCAGGAGAAGAAAGAAGAGTCAGGTTTGCCATAGATGACGAATTTGAATGTGGCTCACGAGCTGAAACAGAAGCCCTTCTGCAAGAAGAACTAGAAGATCTTGTAGCTGCCCAGCAATCAGGGACAGCGTTCATTCTCGGGCATTCACACGTCCGGGCAAAGCAAGGATCGTCTCTGTTGAAGAGACTGGCCATTAACTATGGCTACAACTTCCTAAGAAGGAATTGCAGAGGAGCAGATGTTGCTCTTAAGGTGCCACCAGTTTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTATAA 2562 44.69 MDVFNIHFQNTLSSIEEQPRRNFGHHCSSPCVCLCAFFSSLKNKGQTGNTDEGFSLGDRDKDAMDLEHGKCWDSSKKDSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSDTNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEHPPEKKKQSKVKLLLEKHRALHTSLLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKAHHEYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLAWLLCISTLGIYNIIHWNPRVYQALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHHTTKNIGFYVSVPESVRWPVLTIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKSPLLALSFLIFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVTKLADFIHYDWFRKQRGNSCSEDDASRSNESTSECKLAVIGTIAFAGATAYEETVQPASVSVGFQTVDSIGDVIEMEPPGEERRVRFAIDDEFECGSRAETEALLQEELEDLVAAQQSGTAFILGHSHVRAKQGSSLLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6536596 6544027 - ClCG07G004960.1 Cla07g00469 276457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00469 853 Pfam K+ potassium transporter 88 663 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla07g00469 853 PANTHER POTASSIUM TRANSPORTER 2 64 853 - -
Cla07g00469 853 Coils Coil 774 794 - -
Cla07g00469 853 TIGRFAM kup: potassium uptake protein 86 852 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cla07g00469 853 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 64 853 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01317 Cla-Chr5:16070873 Cla07g00469 Cla-Chr7:6536596 0 dispersed
Cla05g02527 Cla-Chr5:36651067 Cla07g00469 Cla-Chr7:6536596 0 dispersed
Cla07g00469 Cla-Chr7:6536596 Cla10g01372 Cla-Chr10:28768947 0 dispersed
Cla07g00469 Cla-Chr7:6536596 Cla09g01844 Cla-Chr9:36099892 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00469 K03549 - csv:101211022 1506.89