Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00571 ATGACGAAGTCCAAGAGTTTTATACACAACCTCATCAGACCATTCAGATTCGGTTCCTCAAGAGATAGGCAGGGCGAGGATGATTTGGAGGAGATTGCTGCTAAGGAACAGAAGGTTATTCAGTTCGAAATCTTAGTTGAAGCTACCAATAATTTCCACCAGAATAACAAGCTTGGCCAAGGCGGATTTGGTCCAGTTTTCAAGGGGAAGTTAAAGGATGGAAGAGTTATTGCAGTTAAGAAGTTGTCGCATTATTCAAAACAAGGGAGAAAGGAGTTTATGACTGAAGCTAAATTGTTGGCTCGTGTGCAGCACAGAAATGTTGTCAATCTGTTGGGATACTGTGTGCATGGTTCAGAGAAACTACTGGTTTACGAATACGTCACGAATGAGAGCCTTGACAAGCTTCTATTTAAATCCAGCAGACGAGGAGAACTTGATTGGAAGAAAAGGTATGACATAATCTTTGGCATCGCACGAGGGTTGCAATATCTTCATGTCGACTCACATAATGTCATTATCCATCGTGACATAAAGGCTAGTAACATTCTGTTGGATGATAAATGGGTCCCTAAGATTGCAGATTTTGGCATGGCTCGCCTCTTCCCTGAAGATCAAACTCATGTCAATACTCGTGTTGCTGGTACAAACGGATATATGGCTCCCGAATATGTGATGCACGGACATCTATCAGCAAAGGCAGATGTTTTTAGCTTTGGTGTTTTGGTTTTGGAACTTATAAGCGGCCAGCGAAATTCGTCATTTAGTTCATTTATGGATGCCGAGAATCTACTTGATTGGGTAAGGTTTTATTTTATTGCGTTGGCCATGCAGACTGATTATAATGAAGATCATCAGACTACAATAGAAGCTTACAAGCTATACAAGAAGGGCAGGAGCTTGGAAATCATGGACCCAACATTAGCATCATCAGCTGTTCCTGACCAAGTTACAATGTGCATTCAGATAGGATTGCTCTGCACACAAGGCGATCCGCATCTACGGCCAGCCATGCCACGTGTAGTTTTAATCCTTTCGAAGAGACATGGTAATTTGGACGAACCAACAAGACCAGGAATACCCGGGTCTCGGTATAGAAGATCTCGTAGGACAAGTGCATCGTCCTCCAACGCTGGTACTTCGGGAACTTCTGGTGCATCCGACTCCTACGCTATGACGAGCAATACTACTGGAACTATAACTGCTACCGCAACGGCAACTGCAACAGCAAACGAACTTGCTTCTGGTTCTTCTCCAGTTAGTCGAGTATCTGCAACAGCAAATGAAGTTGCTTCTGGTTCTTCTTCAGTTAGTCAAGGATACGATACTCGTGGGAAACGTCCGATAGAAGGTTAG 1356 43.44 MTKSKSFIHNLIRPFRFGSSRDRQGEDDLEEIAAKEQKVIQFEILVEATNNFHQNNKLGQGGFGPVFKGKLKDGRVIAVKKLSHYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGSEKLLVYEYVTNESLDKLLFKSSRRGELDWKKRYDIIFGIARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSAKADVFSFGVLVLELISGQRNSSFSSFMDAENLLDWVRFYFIALAMQTDYNEDHQTTIEAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDPHLRPAMPRVVLILSKRHGNLDEPTRPGIPGSRYRRSRRTSASSSNAGTSGTSGASDSYAMTSNTTGTITATATATATANELASGSSPVSRVSATANEVASGSSSVSQGYDTRGKRPIEG 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9749949 9757517 + ClCG07G005960.2 Cla07g00571 276559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00571 451 SMART serkin_6 52 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00571 451 MobiDBLite consensus disorder prediction 350 391 - -
Cla07g00571 451 PANTHER RECEPTOR-LIKE KINASE 283 390 - -
Cla07g00571 451 PANTHER RECEPTOR-LIKE KINASE 3 270 - -
Cla07g00571 451 MobiDBLite consensus disorder prediction 408 451 - -
Cla07g00571 451 Gene3D Phosphorylase Kinase; domain 1 17 127 - -
Cla07g00571 451 Gene3D Transferase(Phosphotransferase) domain 1 128 355 - -
Cla07g00571 451 CDD STKc_IRAK 58 347 - -
Cla07g00571 451 MobiDBLite consensus disorder prediction 367 391 - -
Cla07g00571 451 Pfam Protein kinase domain 52 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00571 451 MobiDBLite consensus disorder prediction 408 442 - -
Cla07g00571 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Cla07g00571 451 SUPERFAMILY Protein kinase-like (PK-like) 37 345 IPR011009 -
Cla07g00571 451 ProSiteProfiles Protein kinase domain profile. 52 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00571 451 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 283 390 - -
Cla07g00571 451 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 270 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g01089 Cla-Chr4:26060328 Cla07g00571 Cla-Chr7:9749949 4.12E-82 dispersed
Cla07g00571 Cla-Chr7:9749949 Cla05g01568 Cla-Chr5:26537136 7.72E-101 dispersed
Cla07g00571 Cla-Chr7:9749949 Cla01g02190 Cla-Chr1:35927636 7.75E-101 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80678 PF00069 Pkinase 1.80E-49 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00571 - - csv:101205738 679.478