Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00628 ATGGGATTTAGAGAAGTTTGGTTGTTGTTGTCAATAATGCTTGCAATTTCAAGTGCTGCTGTTGATCAACAGACTTACATTATTCATATGGACACCACAAAGATGGTCACCACCAACCCTGAACAATGGTACAAAGCCATGATTGATTCAGTCAATGAACTCTCGTCTCTTGACGACAACGAAGAAGAAGCATCAAACTTTGCTGAGATTCTCTACGTCTACAAAACTGCCCTTTCAGGTTTTGCTGCAAAGCTTTCCACAAAAAAACTTCATTCTTTGAGCAAAATTCCTGGCTTTCTAGCAGCCACTCCAAATGAACTACTACAGCTTCACACCACTCACTCCCCTCAGTTCCTGGGCCTACAAAGAGACCATGGCCTTTGGAATTCTTCAAACATGGCTTCTGATATAATCATTGGTTTGCTTGACACTGGCATTTGGCCTGAGCATATAAGTTTCCAAGACAAGGGTCTGCCCCCTGTGCCCTCAAAATGGAAAGGCATTTGCCAAGCAGGCCCAAAGTTCTCACCTTCAAATTGTAACAAAAGGCTCATTGGAGCAAGTGCCTTTATTAAAGGCTACGAGGCCATCGTTGGTAGATTGAATGAAACAGGGACGTTCCGGTCGCCCCGAGACTCGGATGGGCATGGGACACACACAGCTTCGACTGCTGCTGGAAATATTGTAAACAAAGCAAACTTTAATAACCAAGGCATGGGAGTAGCCACTGGAATGAGCTTCAGTTCAAGGATCGTAGCATACAAAGTATGTTGGCCCTTAGGGTGTGCAAATGCGGATATTCTGGCAGCCATGGACAGTGCCGTCGCAGACGGAGTCGATGTTCTATCACTCTCTTTGGGTGGCGGTGCTGGTTCCTTTTACAGAGATAACATTGCCATAGCTGCATTTGGTGCTATTCAAAATGGGGTTTTTGTTTCATGTTCAGCTGGTAATTCTGGCCCATCATCCTCAACTGTTGGAAATGCAGCCCCATGGATCATGACAGTTGCTGCTAGCTACACAGACAGAACTTTCCCAACCACTGTAAAGCTTGGAAATAGACAAGTTTTTGAAGGCTCGTCTTTGTATTATGGTAAGAATATAAATGAACTCCCACTTGTTTATAACAATACTGCTGGTGATGGACAAGAAACAAATTTTTGCACTGCTGGTTCACTTGACCCATCAAAGGTGAAGGGAAAAATTGTGTTGTGTGAAAGAGGATCAAACTCAAGAACTGCAAAAGGAGAGCAAGTAAAATTAGCTGGAGGAGCTGGAATGATTCTAATCAACACACAATTTGAAGGTGAAGAGCTTTTTGCTGACCCTCATGTTTTGCCAGCCACGACTCTTGGAGCTAAAGCTGGCAAAGCCATCTTAGACTACATAGCTTCCTCGAAAAGTCAAGCGAAAGCTTCGATCGCATTCCAAGGGACTAAATATGGAAGCCAAGCGCCAAGAGTGGCTGCATTTTCTTCTCGAGGGCCCAGCTTTGTTGGACCAGATGTGATAAAGCCAGATGTAACTGCACCTGGTGTTAATATATTGGCTGCTTGGCCGCCGATTGTGAGCCCAAGTGAGCTTGAGTCCGATAAAAGAAGAGTGTTGTTCAATATCATTTCCGGGACTTCTATGTCTTGCCCTCATGTTAGCGGTTTAGCTGCATTGCTTAAATCGGCTCACAAGGATTGGTCGCCTGCTGCGATTAAATCCGCGCTCATGACCACAGCTTACGTAAGTGACAATAAAATGAGTCTCATTTCTGACGTCGGTCATGCTAGTGGCGGACCTGCGGACCCTTTTGCATTCGGTTCTGGCCATGTCAATCCCGAGAAAGCTTCCGATCCAGGTCTCGTATACGATATCGCGCCCCAAGACTACATAAACTACTTGTGTAGCTTGAAGTATAACTCAACACAAATTGCTTTAGTTTCAAGAGGGAAATTCACATGTTCATCAAAAAGAACTATTCTTCAACCAGGAGACTTGAACTACCCTTCTTTCTCTGTGTTCATGAAGAAGAAGGCCAAAAATGTTACTATAACACTAAAGAGAACAGTGACAAATGTTGGTATCCCAAGAAGTGATTACACTGTTAAAATCAATAATCCAAAAGGAATAGCAGTTATTGTGAAGCCAGAGAAGTTAAGTTTTGGGAGCTTGGGAGAGAAGTTGAGTTACCAAGTGAGTTTTGTTGGATTGGGAGGAAAAGAAGCTTCGGGTGAATTTTCTTTTGGATCTCTTGTTTGGGTCTCAGGAAAATACGCTGTTAGAAGTCCTATAGCAGTAACTTGGCAATAG 2301 43.72 MGFREVWLLLSIMLAISSAAVDQQTYIIHMDTTKMVTTNPEQWYKAMIDSVNELSSLDDNEEEASNFAEILYVYKTALSGFAAKLSTKKLHSLSKIPGFLAATPNELLQLHTTHSPQFLGLQRDHGLWNSSNMASDIIIGLLDTGIWPEHISFQDKGLPPVPSKWKGICQAGPKFSPSNCNKRLIGASAFIKGYEAIVGRLNETGTFRSPRDSDGHGTHTASTAAGNIVNKANFNNQGMGVATGMSFSSRIVAYKVCWPLGCANADILAAMDSAVADGVDVLSLSLGGGAGSFYRDNIAIAAFGAIQNGVFVSCSAGNSGPSSSTVGNAAPWIMTVAASYTDRTFPTTVKLGNRQVFEGSSLYYGKNINELPLVYNNTAGDGQETNFCTAGSLDPSKVKGKIVLCERGSNSRTAKGEQVKLAGGAGMILINTQFEGEELFADPHVLPATTLGAKAGKAILDYIASSKSQAKASIAFQGTKYGSQAPRVAAFSSRGPSFVGPDVIKPDVTAPGVNILAAWPPIVSPSELESDKRRVLFNIISGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYVSDNKMSLISDVGHASGGPADPFAFGSGHVNPEKASDPGLVYDIAPQDYINYLCSLKYNSTQIALVSRGKFTCSSKRTILQPGDLNYPSFSVFMKKKAKNVTITLKRTVTNVGIPRSDYTVKINNPKGIAVIVKPEKLSFGSLGEKLSYQVSFVGLGGKEASGEFSFGSLVWVSGKYAVRSPIAVTWQ 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11889021 11894246 - ClCG07G006550.2 Cla07g00628 276616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00628 766 Gene3D Peptidase S8/S53 domain 136 627 IPR036852 GO:0004252|GO:0006508
Cla07g00628 766 CDD PA_subtilisin_like 348 468 - -
Cla07g00628 766 Pfam Fibronectin type-III domain 662 763 IPR041469 -
Cla07g00628 766 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Cla07g00628 766 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Cla07g00628 766 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Cla07g00628 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 766 IPR045051 -
Cla07g00628 766 Pfam PA domain 372 459 IPR003137 -
Cla07g00628 766 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252|GO:0006508
Cla07g00628 766 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 16 766 - -
Cla07g00628 766 Gene3D - 631 765 - -
Cla07g00628 766 CDD Peptidases_S8_3 108 578 IPR034197 -
Cla07g00628 766 Pfam Peptidase inhibitor I9 25 111 IPR010259 -
Cla07g00628 766 Gene3D - 342 481 - -
Cla07g00628 766 Pfam Subtilase family 135 604 IPR000209 GO:0006508|GO:0008236
Cla07g00628 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 12 111 IPR037045 -
Cla07g00628 766 ProSiteProfiles Serine proteases, subtilase domain profile. 118 614 - -
Cla07g00628 766 SUPERFAMILY PA domain 370 464 IPR046450 -
Cla07g00628 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00628 Cla-Chr7:11889021 Cla09g00096 Cla-Chr9:943443 0 dispersed
Cla09g00814 Cla-Chr9:8316911 Cla07g00628 Cla-Chr7:11889021 0 dispersed
Cla07g00626 Cla-Chr7:11788288 Cla07g00628 Cla-Chr7:11889021 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00628 - - csv:101210266 1332.39