Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00638 ATGATTGAAAAGGAATTTTTCACTGAATATGGTGAAGCTACTCAATATGAAATTGAAGAAGTAATAGGTAGAGGGAGCTATGGAGTTGTTGCATCTGCCATAGACACTCATTCTGGTGAGAAAGTTGCCATCAAGAAGATAAATAATGTCTTCGAGCATGTTTCTGATGCCACACGGATTCTAAGAGAAGTTAAGCTCCTTAGGTTTCTTCGTCATCCTGATATTGTTGATATAAAACATATAATGCTCCCTCCATCCAGAAGGGATTTCAAAGATTTGTACATTGTTTTTGAGTTGATGGAGTGTGATCTTCATCATGTACTCAAGACTAATGATGATCTCACTCCTCAGCATCATCAGTTTTTCTTGTATCAACTTCTTAGAGCCTTGAAATATATACATTCAGCGCATGTGTTCCATAGAGATCTGAAGCCGAAGAATATACTTGCCAATGCAGACTGCAAGCTGAAGATCTGTGACTTTGGACTTGCACGTGCATCTTTTAGTGATGCCCCATCTGCTATTTTTTGGACTTTCGGTTTAACTGACTTTAATCACTTCACTTCTTTCAAGGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATTTTTGCTGAAATGTTGGCAAGCAAGCCTTTGTTTCCTGGGAAAAGTGTTGTCCATGAGCTGGATCTAATAACTGACCTACTTGGTACTCCTTCAGCTGAATGTATTGCTAAGATTCGTAATGAAAAGGCTAAAAGGTATTTGAGTGGCATGAGAAAAAAGAATCCAATACCTCTGTCTAGAAAGTTCCCGAATGCAGATCCACTAGCTCTTCGTTTACTTGAACGCCTGCTTGCATTTGATCCTGAGGATCGTCCTTCTGCAGAGGAGGCATTAGCTGATCCTTATTTCCATGGACTGGCAAATCTGAAGGATGAACCATCTAGGCAACCCATTTCAAAACTCGAGTTTGAGTTTGAAAGGAGAAAGTTGACCAAAGATGACGTCAGAGAGCTTATCTATAGAGAAATTTTAGAGTATCACCCTCAAATGCTACAGGAATACCTTCAAGGTTCTGGGAGTCACTTTGTGTATCCCAGTGGAATTGATCGATTCAAGCGACAATTTGATCATCTTGAGGAACGTTCTGGTAAAGGTGAGAGAGGCAGTCCAGTTCTAAGGAAGTATGCCTCCTTGCCTAGGGAGCGAATTTATATGCCAATAAATGAAGATGATGACGAAAAACGTAAAACAGAACAACAAAATGCAGCTTCAGCTGAACATGTAGCTCTTCAAAGCCCTCCTGGACCTGCTTATTCATTAACCGCTCGGAACGGTTCTGTTCAAGTAGATTGCAATAGTTATAACCTGTTAAGGAGTGCTAGTATCAATTGTTCTAAATGGGTGGATTAA 1461 40.11 MIEKEFFTEYGEATQYEIEEVIGRGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREVKLLRFLRHPDIVDIKHIMLPPSRRDFKDLYIVFELMECDLHHVLKTNDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFSDAPSAIFWTFGLTDFNHFTSFKDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLASKPLFPGKSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLSGMRKKNPIPLSRKFPNADPLALRLLERLLAFDPEDRPSAEEALADPYFHGLANLKDEPSRQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGSGSHFVYPSGIDRFKRQFDHLEERSGKGERGSPVLRKYASLPRERIYMPINEDDDEKRKTEQQNAASAEHVALQSPPGPAYSLTARNGSVQVDCNSYNLLRSASINCSKWVD 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12421762 12426630 + ClCG07G006650.2 Cla07g00638 276626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00638 486 Gene3D Transferase(Phosphotransferase) domain 1 102 343 - -
Cla07g00638 486 ProSitePatterns MAP kinase signature. 51 154 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cla07g00638 486 SUPERFAMILY Protein kinase-like (PK-like) 13 325 IPR011009 -
Cla07g00638 486 CDD STKc_TDY_MAPK 15 365 - -
Cla07g00638 486 MobiDBLite consensus disorder prediction 422 452 - -
Cla07g00638 486 ProSitePatterns Protein kinases ATP-binding region signature. 22 46 IPR017441 GO:0005524
Cla07g00638 486 MobiDBLite consensus disorder prediction 422 438 - -
Cla07g00638 486 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 4 443 - -
Cla07g00638 486 Pfam Protein kinase domain 16 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00638 486 Gene3D Phosphorylase Kinase; domain 1 32 366 - -
Cla07g00638 486 SMART serkin_6 16 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00638 486 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 4 443 - -
Cla07g00638 486 ProSiteProfiles Protein kinase domain profile. 16 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01427 Cla-Chr6:27853411 Cla07g00638 Cla-Chr7:12421762 0 dispersed
Cla07g00638 Cla-Chr7:12421762 Cla09g02179 Cla-Chr9:39428202 0 dispersed
Cla08g00080 Cla-Chr8:1644569 Cla07g00638 Cla-Chr7:12421762 4.01E-10 transposed
Cla03g00935 Cla-Chr3:15460447 Cla07g00638 Cla-Chr7:12421762 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80679 PF00069 Pkinase 3.40E-66 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00638 - - csv:101204645 860.907