Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00676 ATGGAGAAGGAAATGAAGAAGACGAGCTTGAAGATGGAGAAGGAAATGACCGAAGACGAGCCTGAAGAAACTGAAGAAGACAGGGGGCCAGAGTCTGTGTTGCAGTTATGGGCTTGTAGCTTCTACTCTGTCAATCACTTCCCAATGGATCCCCCAACCTCCTACCGTAGTCGCAGAACCGCCAACAAATCTGAGCTCTATTCCACAGTTGTCATCCATTCCAATTCTGATTCCGACTCCGACAACAATCCTGACGATCGGAATCTTCACCCTCCACGAAGGCCACCCAGCGAAGGACAAGACCTTTACGCCACAATGCTCTATAAGGACGTTGATAAGCCCCGCGGCGACGACGACGACGACGATGATTCCTCTCTCCCTCCTCTCCTCAAACGTCTTCCCAAGGATTTCGGTGGCGGAGCCCCAATTGACTACGAGGACGACCATGCTTTTGATTTCGATCACGATACTGAAGACTTCGGTACCATGATCGTCAAGACGGACAGAAATCGCCCTCGAAATCGCTCTATGTCTTCTTCAGTTTCGACGAAGCCTCGAACTTCGCCGCTGCCGTTTATGAACTTTCAGCCGGGGAGCCCCGGGAAGAGAGCTGGCAGTGAAGAAGGCGACGACAGCGAGGAAGATGATGGTGATGAGTATTCTACGTTTGTGGTGAGGTCCACGGGGAGGTCGCGGAACAGAGAATCTGTTAGTGGGACTGTTGTTCGAAGGACTGCTGGTAGTCGCAGTGGTTCCAGAGATGGAGGCGGAGGACATGAGGGGTCCACGATGGGCAGAGCGGTCGCCAGTATGCAAGGTATGGGAGAGTTAGGGTTTGGGAAGCAGAGGAAGGGGAATGGATCACCGAGGAGTGAGGAAGGCGGTGGTCGGATACGCAGTAAGGTATCCTCAAGTTCGATTCCGGAAAGCATCACCAGGGAAGATCCACATTCTAAGTATGAATTGCTCAACGAACTTGGAAAGGGGTCCTATGGGGCTGTATATAAAGCAAGAGATATTAAGACCTCTGAGCTGGTTGCTATCAAGGTCATTTCTTTATGTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATTGAGATGTTGCAGCAATGCAGTCATCCAAATGTTGTTCGCTATCTTGGGAGCTATCAAGGAGAAGAGTATCTATGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAATGTTACCGAGGAACCTCTAGAGGAATATCAGATTGCATATATCTGTAGGGAGGCATTGAAGGGCCTCACTTATCTTCATTCAATATTCAAAGTTCACAGAGATATCAAGGGTGGTAATATTTTGTTAACTGAGCAAGGAGATGTCAAGTTGGGCGATTTTGGAGTTGCAGCCCAGCTGACTAGGACCATGTCAAAGCGCAATACATTCATTGGCACTCCACATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGATACGATGGGAAGGTGGATGTGTGGGCTCTTGGTGTTTCTGCTATTGAAATGGCTGAGGGGCTTCCTCCAAGATCAGCAGTGCATCCAATGAGGGTTTTATTCATGATATCGATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCTTGTTGTTCCATGATTTTGTTGCAAAGTGTCTGACAAAAGATCCCCGTTCACGTCCTGCTGCTTCTGAAATGTTGAAGGTAATTCATGCTAATATTGTGTACCAAATAAATGAGGACTAG 1752 48.23 MEKEMKKTSLKMEKEMTEDEPEETEEDRGPESVLQLWACSFYSVNHFPMDPPTSYRSRRTANKSELYSTVVIHSNSDSDSDNNPDDRNLHPPRRPPSEGQDLYATMLYKDVDKPRGDDDDDDDSSLPPLLKRLPKDFGGGAPIDYEDDHAFDFDHDTEDFGTMIVKTDRNRPRNRSMSSSVSTKPRTSPLPFMNFQPGSPGKRAGSEEGDDSEEDDGDEYSTFVVRSTGRSRNRESVSGTVVRRTAGSRSGSRDGGGGHEGSTMGRAVASMQGMGELGFGKQRKGNGSPRSEEGGGRIRSKVSSSSIPESITREDPHSKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLTYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLLFHDFVAKCLTKDPRSRPAASEMLKVIHANIVYQINED 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14488772 14499852 - ClCG07G007070.2 Cla07g00676 276664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00676 583 Pfam Protein kinase domain 320 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00676 583 CDD STKc_MAP4K3_like 319 570 - -
Cla07g00676 583 MobiDBLite consensus disorder prediction 1 32 - -
Cla07g00676 583 ProSiteProfiles Protein kinase domain profile. 320 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00676 583 MobiDBLite consensus disorder prediction 79 94 - -
Cla07g00676 583 MobiDBLite consensus disorder prediction 1 17 - -
Cla07g00676 583 MobiDBLite consensus disorder prediction 71 143 - -
Cla07g00676 583 SMART serkin_6 320 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00676 583 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 262 570 - -
Cla07g00676 583 MobiDBLite consensus disorder prediction 224 247 - -
Cla07g00676 583 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 262 570 - -
Cla07g00676 583 SUPERFAMILY Protein kinase-like (PK-like) 317 570 IPR011009 -
Cla07g00676 583 MobiDBLite consensus disorder prediction 277 316 - -
Cla07g00676 583 ProSitePatterns Protein kinases ATP-binding region signature. 326 349 IPR017441 GO:0005524
Cla07g00676 583 MobiDBLite consensus disorder prediction 174 194 - -
Cla07g00676 583 MobiDBLite consensus disorder prediction 164 265 - -
Cla07g00676 583 Gene3D Transferase(Phosphotransferase) domain 1 316 582 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00676 Cla-Chr7:14488772 Cla11g01134 Cla-Chr11:23296140 0 dispersed
Cla07g00676 Cla-Chr7:14488772 Cla05g00470 Cla-Chr5:4284570 7.56E-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80680 PF00069 Pkinase 6.00E-66 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00676 - - csv:101209775 882.093