Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00678 CTCTCTTTCTATTTCTCTTTCTTGAATTATTACTACTGTCACGCAGCCAGTACAGAGATCCATGGCAATGCCCCCGTTTCTTCTTCAATCTCCAATTATAACTCCTGTAATTCCTGTTCCTTTGCTTCTCCCAGTCCCATTCCTCAACCAACCTACCACTTTCTGATCGATCTTCAAGCTTCAACCGGCGGAAATGGCAATGCAGGCTTCTTAATCCACGGAAGTGATGGAACGGAAGGACTTTTTGTTGATGATTGCAGTTCGGAACTCGCCGATTTCAGTAGGTTTTGTCACGATGTCCGTGAGTTTTTACAAGTGATTGTCTCCAGTCGGTGTTTTCCCGAGGACGTCGCCATTGGAGAGCATCTTGTTCTTAACTCCATGTCTACAGAAGATGAGACTGTTTGCAATGCCAATCCAACCGAGCTCCAAGAGGTGTTTTCTGCGATGAACCTTATGGTTTTGAGGATTTCTCCATTTTTCTTCATTTTGTTGGTTTGTGTACTGCCTCTGGTTCGAGCTGGAGATGCAGAAGCTCTGTTAGCACTGAAAGAATCTCTTGACCCTGGGAACTCGCTACCATGGCGGGGAAGATCTGTCTGCCACTGGCAAGGGGTTAAAGAATGTGCGAATGGGCGGGTAACTAAGCTCGTTTTGGAGCATCTAAATCTCTCTGGTGTTCTTAACCACAAGATTTTGAATCGTTTAGATCAGCTTCGTGTTCTCAGTTTCAAAGGAAATTCACTTTCCGGTCAAATCCCTGACCTCTCGGGTCTCGTTAATCTCAAATCCCTCTATCTAAGTGACAACAACTTTTCCGGCGAGTTTCCGAGCTCCATCTCCGATCTCCACCGCTTGAAAGTCGTCGTTCTTTCCGGTAACCAAATATCTGGCCCCATTCCAGAGTCATTGCTCAAACTCCGGCGTCTCTATGTTCTACACTTGCAGGACAACCAACTCACCGGCTCCATTCCTCCTTTCAACCAAACCAGTCTCCGATTCTTCAATGTCTCTAACAACCACCTCTCCGGCGACATCCCAGTAACCCCCACCTTAGCCCGATTTAATGTCTCGTCATTTTCCGGAAACCTGGAACTTTGCGGAGAACAAGTTCAAAACCCTTGTGGGAATATTTCCATTGCGCCATCATTAAGTCCCTCTTATCCACAATTCCCGAACTCAAGCTCGTCTTCAAGACGCAACAAATTGGTCAAGATAATAGCAGGAAGCGTTGGTGGGTTTGTCGGGCTGCTATTAATCATTCTTTTACTGTGTATGATTTGCAAATGTAGGGAAAGAAAGAGCCTAGCGGAGGTTAGAAACAAAGGAATTGGGGACGAGGGGATGGGGATGGGAATGGAGGAAACATCTGGAACTCCGGGCGGTGGTAGAGGAGGTAATAACGGTGTAAAACAAGGGGGGTTTTCATGGGAAAGTGAAGGACTAGGGAGTCTAGTGTTCTGCGGAGCAGGGGATCAGAAAATGACTTATAGCTTGGAAGATCTTTTGAAAGCTTCGGCTGAGACTTTGGGCAGAGGGACCATCGGAAGCACATACAAGGCAGTGATGGAATCTGGGTATATTGTGACAGTGAAGCGGCTGAAGGATTCAAGGTACCCACGAGCAGAGGAATTCGGACGGCAGATGGAGGTTCTTGGGCGGCTCAGACATCCCAACTTGGTTCCTCTTAGGGCATATTTCCAGGCTAAGGAGGAACGCTTGCTCGTATACGATTACTTCCCCAATGGTAGTCTCTTCTCTCTCATCCACGGATCGAGAACTTCAGGCGGAGGAAAGCCTCTTCATTGGACATCCTGCCTAAAAATAGCTGAAGACTTGGCCAATGGTCTGCTCTACATCCACCAGAACCCAGGCTCCACACATGGAAACCTCAAATCCTCAAACGTACTATTAGGATCCGACTTCGAGTCTTGTCTTACTGATTACGGTCTTAACTTATTCCGAGACCCCGACTCGCTCGAAGAACCTAGTGCAACCTCACTCTTTTACCGAGCTCCTGAATGCCGCGACATCCGTAAGCCAACCACTCAACAAGCTGATGTTTATAGTTTTGGTGTTCTTCTGTTGGAGCTTCTTACTGGGAAAACACCATTCCAGGATCTTGTTCAAGAACATGGTTCTGACATTCCCAAGTGGGTTAGTTCAGTTAGAGAAGAGGAGACGGAGTCCGGGGACGATCCTGCGTCTGGGAATGAGGCATCCGAAGAGAAACTTCAAGCTCTTTTGAACATAGCAATGGCTTGTGTTTCGCTTATGCCGCAAAACCGACCTACAATGAGGGAAGTTCTAAAGATGATAAGAGATACAAGAGCAGAGGCTCAAATCTCATCCAACAGTAGTGACCATTCACCAGGGAGATGGTCTGATATTGTGCAGAGTTTGCCCAGGGAAGAACATTTAAGCATTTGA 2430 47.0 LSFYFSFLNYYYCHAASTEIHGNAPVSSSISNYNSCNSCSFASPSPIPQPTYHFLIDLQASTGGNGNAGFLIHGSDGTEGLFVDDCSSELADFSRFCHDVREFLQVIVSSRCFPEDVAIGEHLVLNSMSTEDETVCNANPTELQEVFSAMNLMVLRISPFFFILLVCVLPLVRAGDAEALLALKESLDPGNSLPWRGRSVCHWQGVKECANGRVTKLVLEHLNLSGVLNHKILNRLDQLRVLSFKGNSLSGQIPDLSGLVNLKSLYLSDNNFSGEFPSSISDLHRLKVVVLSGNQISGPIPESLLKLRRLYVLHLQDNQLTGSIPPFNQTSLRFFNVSNNHLSGDIPVTPTLARFNVSSFSGNLELCGEQVQNPCGNISIAPSLSPSYPQFPNSSSSSRRNKLVKIIAGSVGGFVGLLLIILLLCMICKCRERKSLAEVRNKGIGDEGMGMGMEETSGTPGGGRGGNNGVKQGGFSWESEGLGSLVFCGAGDQKMTYSLEDLLKASAETLGRGTIGSTYKAVMESGYIVTVKRLKDSRYPRAEEFGRQMEVLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRTSGGGKPLHWTSCLKIAEDLANGLLYIHQNPGSTHGNLKSSNVLLGSDFESCLTDYGLNLFRDPDSLEEPSATSLFYRAPECRDIRKPTTQQADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPKWVSSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLMPQNRPTMREVLKMIRDTRAEAQISSNSSDHSPGRWSDIVQSLPREEHLSI 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14544514 14550554 + ClCG07G007090.1 Cla07g00678 276666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00678 809 SUPERFAMILY L domain-like 175 367 - -
Cla07g00678 809 MobiDBLite consensus disorder prediction 780 809 - -
Cla07g00678 809 Pfam Protein kinase domain 507 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00678 809 MobiDBLite consensus disorder prediction 780 794 - -
Cla07g00678 809 Gene3D Transferase(Phosphotransferase) domain 1 580 795 - -
Cla07g00678 809 Pfam Leucine rich repeat 261 320 IPR001611 GO:0005515
Cla07g00678 809 Gene3D Phosphorylase Kinase; domain 1 487 579 - -
Cla07g00678 809 MobiDBLite consensus disorder prediction 719 740 - -
Cla07g00678 809 Gene3D Ribonuclease Inhibitor 174 328 IPR032675 -
Cla07g00678 809 Gene3D Ribonuclease Inhibitor 329 377 IPR032675 -
Cla07g00678 809 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 160 799 - -
Cla07g00678 809 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 160 799 - -
Cla07g00678 809 Pfam Leucine rich repeat N-terminal domain 175 206 IPR013210 -
Cla07g00678 809 ProSiteProfiles Protein kinase domain profile. 504 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00678 809 SUPERFAMILY Protein kinase-like (PK-like) 508 782 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01661 Cla-Chr1:31496163 Cla07g00678 Cla-Chr7:14544514 1.44E-150 dispersed
Cla07g00678 Cla-Chr7:14544514 Cla04g00636 Cla-Chr4:20744678 4.49E-111 dispersed
Cla07g00678 Cla-Chr7:14544514 Cla11g00245 Cla-Chr11:2868483 1.77E-121 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80681 PF00069 Pkinase 8.40E-36 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00678 - - csv:101209119 1173.69