Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00713 ATGGCAGTGAATGAGACCGGAAGGGGTAGCTGTCCGGCGGCGATGAAAGCGACGTCGAACGGCGTGTTTCAAGGCGACAACCCGCTTGATTTCGCTCTCCCTTTAGCCATTCTTCAAATATGTTTAGTGGTTGTTCTTACTCGTCTTCTTGGTTTCCTTCTCCGACCACTCAGACAACCTCGAGTCATCGCTGAGATTGTCGGAGGAATATTGTTGGGACCGTCGGCAGTGGGGCGGAGCCAAGAATTTCTTCACAGAGTCTTTCCGGCAAGAAGCCTACCGGTGTTGGATACATTGGCAAATCTGGGTCTTCTGTTCTTCCTATTTTTGGTGGGGATGGAGTTAGATCTCAAATCCCTCCGTCGTACCGGAAAGGGTGCAATGGCCATAGCCATTGCCGGAATCACCCTCCCTTTCATCCTCGGCATTGGAACCTCCTATGTCCTCCGTTCCACCATCTCCAAAGGCGTCCATGGCCCTCCTTTTCTAGTTTTCATGGGCGTAGCTCTCTCCATTACCGCTTTCCCCGTCCTTGCCCGCATTCTCGCCGAACTCAAGCTCTTAACCACCAACGTCGGTCGCATGGCCATGTCTGCCGCCGCCGTCAATGACATCGCCGCTTGGATTCTCCTGGCCCTCGCCGTCGCCCTCTCCGGCACCGGCCGCTCCCCTCTCGTCTCCCTCTGGGTCTTCCTGTGCGGCTTTGCTTTTGTCCTGTTTTGCTTCTTCACTCTCCCGCCCATCTTCGGTTGGATTTCCCGCCACTGCTCCAATGGCGAGCCAGTAAGCGAACTCTACATTTGCGCCATTTTATCCAGCGTCTTGGCAGCTGGATTCATCACCGACTTAATTGGAATCCACGCCCTGTTTGGCGCTTTCGTCGTCGGTGTCTTCGTCCCAAAAGACGGCCCACTCGCTGGAGCCCTGGTGGAGAAAGTCGAAGATCTTGTATCGGGTCTATTCCTCCCTCTCTATTTCGTATCAAGCGGATTAAAAACCAACATTGCCACAATCAAAGGAGCTCAATCATGGGGTCTCCTCGTCCTGGTGGTATTCACCTCTTGTTTTGGGAAAATCATCGGCACAATCTCTGTAGCACTCTTTTGCAAGATGCCACTCCAAGAATCAATCGCTTTAGGATTCTTAATGAACACCAAAGGGCTAGTGGAATTAATTGTCCTAAACATAGGGAAAGACAGAAAAGTTTTAAATGACCAAACCTTTGCGATTTTAGTTCTAATGGCTATAATCACGACGTTCATCACAACCCCAGTCGTAATGGCGGTTTACAAGCCAGCAAAAAGAAAGAGCAAATCAGAATACACATGCAGAACAATCGAGCGAGAGGAGGGCAATTCAGAGCTGCGGATTTTGGCTTGCTTTCACTCTGTTAATAACATTCCTTCGATATTGAATCTGATAGAGGTTTCTCGTGGGAGGGAGGGTCGTGGTCGGCGGTTATGTGTTTATGCGATGCATTTGATGGAGCTGACGGAGAGGTCGTCGGCGATTGTAATGGTTCATAGAGCTAGAAAGAATGGATTGCCGTTTTGGAATAAAAGAGGAGGGCAGTCAGATTCGGATCAAATAGTGGTGGCTTTTGAGGCTTTTGAGCAGCTTAGTCGAGTGTCAATACGTCCAATGACGGCCATATCTGCGTTCTCAGATATGCATGAGGATATTTGTAACAGTGCCGACAGAAAACGTGCCGCCATTATCATCCTCCCATTCCACAAACACCAAAGGTTTGATGGATCTTTGGAGACGACACGAACTGATTTTCGATGGGTGAATCAAAAAGTTCTAGAACAACCACCATGCTCGGTTGGGATCTTAGTCGACAGAGGTTTCGGAGGTGGTTCACACATATGTGCTAGTAACGTTTCTTCCATCGTAACTGTCTTCTTCTTTGGCGGTCGTGACGATCGCGAAGCTTTAGCCTATGGTCGAAGAATGGCTGAACATCCAGGAATAACCCTAAATGTCGTTCGTATTCTTCCAAGCTCTGACATGGCTACAAAATCAACTATAGTTGACATGAATAAAGACGATAGCAATATTTCGGCACTCATGGATCAGAAAGTATTGATGGAGTTGAATGTGAAAAAAACAGAGGACGAGTCAATTAGATATGAAGAGAGAACAGTGAGCAAATGCAATGAGACCATTGAAATAATAAGAGAATTTAGTAGATGCAATTTGATATTGGTGGGTCAATCCCCTGAAGGCCAAGTAGTGGAAAGTCTTCATTTCAAAGGTGTTGAGTGCTCGGAGTTGGGTCCCATTGGCAACTTGTTGATATCATCTGAGCTCGCAATGTCAGCTTCAGTGTTGGTGGTGCAACAATTTCGTGGTCCATTATTGTCTTCTTCATCCACGTCTACAGCCATGGTATTGCCTGAAGAAGTTACTGAGTAA 2418 47.81 MAVNETGRGSCPAAMKATSNGVFQGDNPLDFALPLAILQICLVVVLTRLLGFLLRPLRQPRVIAEIVGGILLGPSAVGRSQEFLHRVFPARSLPVLDTLANLGLLFFLFLVGMELDLKSLRRTGKGAMAIAIAGITLPFILGIGTSYVLRSTISKGVHGPPFLVFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDIAAWILLALAVALSGTGRSPLVSLWVFLCGFAFVLFCFFTLPPIFGWISRHCSNGEPVSELYICAILSSVLAAGFITDLIGIHALFGAFVVGVFVPKDGPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNIATIKGAQSWGLLVLVVFTSCFGKIIGTISVALFCKMPLQESIALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMAIITTFITTPVVMAVYKPAKRKSKSEYTCRTIEREEGNSELRILACFHSVNNIPSILNLIEVSRGREGRGRRLCVYAMHLMELTERSSAIVMVHRARKNGLPFWNKRGGQSDSDQIVVAFEAFEQLSRVSIRPMTAISAFSDMHEDICNSADRKRAAIIILPFHKHQRFDGSLETTRTDFRWVNQKVLEQPPCSVGILVDRGFGGGSHICASNVSSIVTVFFFGGRDDREALAYGRRMAEHPGITLNVVRILPSSDMATKSTIVDMNKDDSNISALMDQKVLMELNVKKTEDESIRYEERTVSKCNETIEIIREFSRCNLILVGQSPEGQVVESLHFKGVECSELGPIGNLLISSELAMSASVLVVQQFRGPLLSSSSTSTAMVLPEEVTE 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19684651 19688875 + ClCG07G007480.1 Cla07g00713 276701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00713 805 PANTHER CATION/H + ANTIPORTER 10 791 - -
Cla07g00713 805 Pfam Sodium/hydrogen exchanger family 40 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cla07g00713 805 Gene3D - 35 440 IPR038770 -
Cla07g00713 805 PANTHER CATION/H(+) ANTIPORTER 17 10 791 - -
Cla07g00713 805 Coils Coil 687 707 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00260 Cla-Chr4:8247773 Cla07g00713 Cla-Chr7:19684651 5.93E-162 dispersed
Cla04g00826 Cla-Chr4:23311043 Cla07g00713 Cla-Chr7:19684651 0 dispersed
Cla07g00713 Cla-Chr7:19684651 Cla07g00721 Cla-Chr7:19755930 0 dispersed
Cla07g00709 Cla-Chr7:19218105 Cla07g00713 Cla-Chr7:19684651 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00713 - - csv:101203169 1355.89