Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00724 ATGGCTTCGAATGCTACGGCAGTGACCACATGTCCAACTCCAATGAAAGCAACATCAAACGGGATTTTCCAAGGCGATAATCCTCTTGATTTTGCTCTCCCTCTTGTCATTCTGCAGATATGTTTGGTAGTCGCACTTACTCGTGGTCTTGCTTTTCTTCTCAGGCCGTTAAAACAGCCACGAGTGATTGGAGAAATTATTGGAGGAATACTTCTAGGACCATCAGCTCTTGGACGTAACAAGAACTTTCTTCATACGATATTTCCATCCAATAGTATGACATTGTTAGATACCATAGCAAACATTGGGTTGTTATTCTTTCTCTTTCTTGTGGGTCTTGAGTTAGATCTAAAGTCAATACGTCGTACTGGAAAGAAGGCCTTTGGCATTGCCATTACTGGAATTTGCGTTCCCTTTGCATTAGGAATTGGATCATCATTTGTCCTCCGAGGAACCATATCCAAAGGTGTAAATGCTTCTGCATTTCTCATATTCATGGGTGTTGCACTTTCGATAACAGCCTTTCCCGTCTTAGCTCGCATTCTTGCTGAGCTTAAACTACTGACGACTGATGTTGGCAGGATGGCTATGTCTGCTGCAGCAGTAAATGACGTAGCTGCCTGGATTCTCCTTGCTCTTGCCATTGCATTATCAGGTTCTGATAAATCTCCCCTAACTGCGGTTTGGGTCCTTTTATCTGGCTGCGGCTTTGTTGTGGCTGCTGTCGTCATTTTATCCCCAGTTTTCAAATGGATGACCAAGCAATGTTTTCAAGGGGAGCCTGTACGGGAAATCTACATATGCGCCACATTAGCTATTGTCCTAGCTGCTGGATTTGCCACGGATTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTTGTTGGAGTATTAGTTCCAAAGGATGGACCATTAGTGGGTGCTTTGGTAGAGAAAATAGAGGATCTTGTTTCTGGTCTATTCCTGCCTCTGTACTTTGTCTCAAGTGGATTGAAGACTAATGTAGCCACAATTCAAGGAGCACAGTCCTGGGGTCTTCTAGTTTTAGTTATTGTCACCGCCTGTTCTGGAAAAATCCTTGGCACTTTTCTAGTGTCCCTTCTTTGTAAAGTACCCGTTCGTGAGGCTCTCGCGTTAGGATTTCTAATGAACACAAAAGGTTTGGTGGAGCTTATTGTTCTCAATATTGGAAAAGATAGAAAGGTAAGATTGTTTAAGCCTCTACTATCACTTATCAAAGACACTTTCATGACTGATTTGCCTTCTCTTCTTTTTTTGGTTTTTTGGAGATCTGATTTGCATCGTTGTTTAATTCTGCAGGTTTTGAATGATCAGACCTTTGCAATAATGATTCTAATGGCTCTTTTTACTACTTTCATTACCACTCCCCTTGTCATTGCTGTATACAAGCCAGCAAGGAGTGCCAAATTAGCCGATTATAAACATAGGAAAATCGAACGGAAAAACAAGAATACGCAGCTTCGGATGTTGACCTGTTTCCATAGTGCAGGAAACATTCCATCAATTATAAATCTGCTTGAGGCCTCGAGAGGAATTCAGAAGGGAGAAGAACTTTGTGTATATGCAATGCATCTCATGGAGCTGTCCGAGCGGTCCTCAGCCATTTTAATGGTACATAAGGCCAGGAAAAATGGGTTGCCTTTCTGGAATAAGGGCCAGAGGTCAGATTCCAACCATGTTATTGTTGCGTTTGAAGCTTATCAACAACTGAGCACAGTATTCATCCGAGCGATGACCGCCATTTCCTCCATGTCTGACATACATGAAGATATCTGTGCTACTGCCGAGAGGAAAAGAACTGCAATCATAATTCTTCCATTCCACAAGCACCAGAGGGTGGATGGTTCCCTGGAGACTACTCAAAGCAGCATCCGTGTTGTTAATCAGAATGTCCTCGAGCATGCTCAATGTTCAGTTGGAATTTTCGTTGATCGGGGGTTGGGTGGAACAACCCATGTTTCTTCGAGCAATGTTTCACTTTTCATTGCTGTTCTATTCTTTGGTGGTGGAGATGATCGCGAAGCACTTTCTTATGGAGTTCGTATGGCTGAGCACCCTGGCATTAGGTTGATGGTTATTCGTTTCTTTGTTGAACCCGAGCCTGTTGGGGAGATAGTCAGTGCTGATACTGTTGGGAATTCTTCTGCGAAGATGGTTTCTCAGGATGATGAATTTCTTTCTGAGTTCAGGAACAATGTGAGCAATAACGATTCCGTCATATATGTAGAGAAAACCATAAAAAGTGCTGCAGAAGCAATGGATACAGTACAGGAGCTGAAAAACTGCAATCTGTATCTTGTTGGTCGAACACCGGATGTCAATTCAACCTTTGTCTTAAACAGAAGTGACTGTCCGGAGCTTGGTCCAGTTGGGAACCTGTTGACTTCACCGAACTTCACGATTTCAGCGTCGGTTTTGGTGGTGCAGCAATATCGTTCTGAGTTACTGGTGAATTCGGTTTCAGATTCTGCTGATGGAGAATCAGAATCATCATAA 2517 42.83 MASNATAVTTCPTPMKATSNGIFQGDNPLDFALPLVILQICLVVALTRGLAFLLRPLKQPRVIGEIIGGILLGPSALGRNKNFLHTIFPSNSMTLLDTIANIGLLFFLFLVGLELDLKSIRRTGKKAFGIAITGICVPFALGIGSSFVLRGTISKGVNASAFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSDKSPLTAVWVLLSGCGFVVAAVVILSPVFKWMTKQCFQGEPVREIYICATLAIVLAAGFATDFIGIHAMFGAFVVGVLVPKDGPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACSGKILGTFLVSLLCKVPVREALALGFLMNTKGLVELIVLNIGKDRKVRLFKPLLSLIKDTFMTDLPSLLFLVFWRSDLHRCLILQVLNDQTFAIMILMALFTTFITTPLVIAVYKPARSAKLADYKHRKIERKNKNTQLRMLTCFHSAGNIPSIINLLEASRGIQKGEELCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGQRSDSNHVIVAFEAYQQLSTVFIRAMTAISSMSDIHEDICATAERKRTAIIILPFHKHQRVDGSLETTQSSIRVVNQNVLEHAQCSVGIFVDRGLGGTTHVSSSNVSLFIAVLFFGGGDDREALSYGVRMAEHPGIRLMVIRFFVEPEPVGEIVSADTVGNSSAKMVSQDDEFLSEFRNNVSNNDSVIYVEKTIKSAAEAMDTVQELKNCNLYLVGRTPDVNSTFVLNRSDCPELGPVGNLLTSPNFTISASVLVVQQYRSELLVNSVSDSADGESESS 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19887424 19890198 + ClCG07G007600.2 Cla07g00724 276712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00724 838 Pfam Sodium/hydrogen exchanger family 42 464 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cla07g00724 838 Gene3D - 35 416 IPR038770 -
Cla07g00724 838 PANTHER CATION/H + ANTIPORTER 7 402 - -
Cla07g00724 838 PANTHER CATION/H + ANTIPORTER 440 830 - -
Cla07g00724 838 PANTHER CATION/H(+) ANTIPORTER 18 7 402 - -
Cla07g00724 838 PANTHER CATION/H(+) ANTIPORTER 18 440 830 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00724 Cla-Chr7:19887424 Cla07g00447 Cla-Chr7:6063378 1.48E-126 dispersed
Cla07g00721 Cla-Chr7:19755930 Cla07g00724 Cla-Chr7:19887424 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00724 - - csv:101223205 1410.97