Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00746 ATGGATGGTGACATAATGAATCCACAAGGTCATCTTATGGGAACTTCTTCATTGATTAATAATTGTGAAATTGATTGGGATGGGCTTTTTTCTGGATCATCTTGTTTGAGTAATATAGAGATGGAGAAGGGAATTTGTGGAAGTGAGGATCAGGTTATTGCATCAATGGGAGATTATGATAATGTTGTGAATATTGGAGGAATAAAAGAGGGTGATATTGGTGGAGGGAAGAATAATTGTAATAAAGGGAAAATGGTGATGGGTAAAAGAAGAAGTGCAATGGCTCCAAGGATTGCTTTTCAGACAAGGAGTGCTGAGGATGTTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAGAAGGCAGTCAAACATAGCAATCATCCTAGGAGCTATTATCGGTGTACACATCACACATGCAACGTTAAGAAACAAATTCAAAGGCACGCCAAGGATCCGACCATAGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAGAAATTAATGGAGACTCTAAGCCCTCTTCTTAAGCAATTGCAGTTCCTTTCTGGCATTTAG 567 39.33 MDGDIMNPQGHLMGTSSLINNCEIDWDGLFSGSSCLSNIEMEKGICGSEDQVIASMGDYDNVVNIGGIKEGDIGGGKNNCNKGKMVMGKRRSAMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHAKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 188
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 20796642 20798866 - ClCG07G007850.1 Cla07g00746 276734
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00746 188 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 21 184 IPR044810 GO:0003700
Cla07g00746 188 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 21 184 - -
Cla07g00746 188 Gene3D WRKY domain 94 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cla07g00746 188 SMART WRKY_cls 109 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla07g00746 188 ProSiteProfiles WRKY domain profile. 104 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla07g00746 188 Pfam WRKY DNA -binding domain 110 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla07g00746 188 SUPERFAMILY WRKY DNA-binding domain 102 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00746 Cla-Chr7:20796642 Cla10g01103 Cla-Chr10:25306121 1.65E-31 dispersed
Cla05g01424 Cla-Chr5:19800519 Cla07g00746 Cla-Chr7:20796642 4.80E-38 transposed
Cla07g01463 Cla-Chr7:31931187 Cla07g00746 Cla-Chr7:20796642 8.22E-41 transposed
Cla11g00902 Cla-Chr11:15370665 Cla07g00746 Cla-Chr7:20796642 4.49E-34 transposed
Cla05g00137 Cla-Chr5:1275566 Cla07g00746 Cla-Chr7:20796642 9.73E-50 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61404 PF03106 WRKY 8.30E-25 CL0274 Cla TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00746 - - cmo:103493140 259.61