Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g00746 | ATGGATGGTGACATAATGAATCCACAAGGTCATCTTATGGGAACTTCTTCATTGATTAATAATTGTGAAATTGATTGGGATGGGCTTTTTTCTGGATCATCTTGTTTGAGTAATATAGAGATGGAGAAGGGAATTTGTGGAAGTGAGGATCAGGTTATTGCATCAATGGGAGATTATGATAATGTTGTGAATATTGGAGGAATAAAAGAGGGTGATATTGGTGGAGGGAAGAATAATTGTAATAAAGGGAAAATGGTGATGGGTAAAAGAAGAAGTGCAATGGCTCCAAGGATTGCTTTTCAGACAAGGAGTGCTGAGGATGTTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAGAAGGCAGTCAAACATAGCAATCATCCTAGGAGCTATTATCGGTGTACACATCACACATGCAACGTTAAGAAACAAATTCAAAGGCACGCCAAGGATCCGACCATAGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAGAAATTAATGGAGACTCTAAGCCCTCTTCTTAAGCAATTGCAGTTCCTTTCTGGCATTTAG | 567 | 39.33 | MDGDIMNPQGHLMGTSSLINNCEIDWDGLFSGSSCLSNIEMEKGICGSEDQVIASMGDYDNVVNIGGIKEGDIGGGKNNCNKGKMVMGKRRSAMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHAKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI | 188 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 20796642 | 20798866 | - | ClCG07G007850.1 | Cla07g00746 | 276734 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g00746 | 188 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 21 | 184 | IPR044810 | GO:0003700 | |
Cla07g00746 | 188 | PANTHER | WRKY TRANSCRIPTION FACTOR 43-RELATED | 21 | 184 | - | - | |
Cla07g00746 | 188 | Gene3D | WRKY domain | 94 | 168 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00746 | 188 | SMART | WRKY_cls | 109 | 168 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00746 | 188 | ProSiteProfiles | WRKY domain profile. | 104 | 169 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00746 | 188 | Pfam | WRKY DNA -binding domain | 110 | 167 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla07g00746 | 188 | SUPERFAMILY | WRKY DNA-binding domain | 102 | 168 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00746 | Cla-Chr7:20796642 | Cla10g01103 | Cla-Chr10:25306121 | 1.65E-31 | dispersed | |
Cla05g01424 | Cla-Chr5:19800519 | Cla07g00746 | Cla-Chr7:20796642 | 4.80E-38 | transposed | |
Cla07g01463 | Cla-Chr7:31931187 | Cla07g00746 | Cla-Chr7:20796642 | 8.22E-41 | transposed | |
Cla11g00902 | Cla-Chr11:15370665 | Cla07g00746 | Cla-Chr7:20796642 | 4.49E-34 | transposed | |
Cla05g00137 | Cla-Chr5:1275566 | Cla07g00746 | Cla-Chr7:20796642 | 9.73E-50 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61404 | PF03106 | WRKY | 8.30E-25 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g00746 | - | - | cmo:103493140 | 259.61 |