Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00778 ATGATGGTTGTAGCCATCTCATTGGAGCAACTTAATCAACGCATGAGAATTTCTCTCCAAGTACCAAAACTTAATCACATTTACAAACATTTCAACATTGTTATGCCTTGTTCAATCCATGTGTTTCTTCACATCAATCAGACCAACCTCTCCAATACTCTTCTTTCCATCTCTAACTTTTCTCGGCAAAACAACATGAAAAACAGGAGATGCTTTCTTCTTGCTCTCTTCTTCTACGCCTTAATCTTTGAGAAACTGACAGTAAAACCAGAGGCAAGTGGCAAGCTTCTTCATATCGTACACCTCGAACATAACCAACATGATCCCAACTCCAGCATCGTCGAGATTCATCATAATTTCTTGTCTACTCTGCTGGGAAGTAAAAAGAAGGCTTCGAAATCCATGGTGTACAGTTATACACATGCCTTTTCTGGGTTTGCTGCAAAGCTCACAAAATCTCAAGCTTATCAGCTTTCTGAAATGCGTGGTGTGGTTCGAGTTCTTCCAAATGTTCTTTACGATCTCCATACAACTAGAAGCTGGGATTTTCTCGGCCTTTCTCCTTCTCCATCTCCCTCAAATCTTCTGCAGATGAGTAATTTGGGTGACGGAATAATCATTGGAGTAGTGGATACAGGAATTTGGCCGGAATCGGAGGCGTTCGACGATCAAGGATTGGGGCCGGTGCCAGTTCGGTGGAAAGGCGAGTGCCAATCAGGGGAACAATTCAAAGCGACGAGAGATTGCAATAGAAAAATCATAGGAGCCAAATGGTACGTTGATGGGTTCATAGCCGAATTTGGGGAATTCAACAGATCAGCAGTGAAGGAATTCATGTCTCCAAGAGATTCAAACGGACATGGGACTCAAACGGCGAGCACCGCCGCCGGTTCGTTCGTGAAAAATGTCAGTTACAGAGGCCTCGGCGGTGGGACTGCAAGGGGCGGCGCACCAGCAGCGCGGTTGGCAGTGTACAAGGCATGTTGGAGCTTGCCCGGTGGCGGTGGCCAGTGTTCGGCGGCGGACGTATTGAAGGGAATGGACGACGCCGTACACGACGGCGTTGATGTATTGTCTCTATCTTTGGGGAAGAGTGCTCCTCTGTTTGCGGAGGTGGATGAAGAGAACGTGGTTGCGATTGGGTCATTCCGGGCAAACATGAGGAATATTTCGGTGGTCTGTTCCGCCGGTAACGACGGGCCTTCTGCAGAGACGGTGATCAACACTTCCCCTTGGATCTTGAGTGTTGCTGCAACTTCTATTGACAGAACTTTTTTGGGCTCTATTACTCTTGGAAATAACAACACTTTTGTGAGTCAAACCCTATACACTAGAAAGGAGATTGGATATAGTGGCTTGGTATATCCAAGGTCTGGGTTGAACCAGATCATCGCAGGGTTATGTGATTCAATAACATTAGTGAATGGTAGTAATTGGATGAGTGGAAAAGTGGTTCTCTGCTTCAGCACAATGGTGGGGATGAATCCAATAGCCATAACAAGAGCTGTGGAAGCTGTGAAAGCAGGAAATGGCTTGGGGTTAATTGTTGCTAGGCATCCTGATGATATCTGGTTTACATGTGACAATGATTTCCCTTGTTTTCAAGTCAATTTTGAAGTTGGCACCAAAATCTTCTATTACATCCGGGCAACAAGTTCTCCAATTGTAAAGCTGAGCCCTTCAAGGACCATCACAGGCAACCCCATTTCAGCACATATAGCATACTTCTCATCAAGAGGTCCCAATTCTGTTGCACCAGCAATTCTGAAGCCAGATATTGGTGCTCCAGGTGTGGCAATATTAGTAGCCACTTCCCCATTTGACATAACAAATGATGGAGGTTTTACCATACAAACAGGAACTTCCATAGCAACCCCTCATATTTCAGCCATTGTTGCTCTTCTCAAGTCACTTCATCCTACTTGGTCTCCTGCTGCCATCAAATCTGCCATTATCACAACTGCATGGAGCAGGCATCCTTCTGGGGTACCAATTCTGGCTGAAGGATCTCCACATAAACTTGGCAATCCATTTGACTATGGAGGAGGAATTGTTAACCCAAATGCAGCTGCAAACCCAGGCCTCATTTACGACATGTCGACTTCCGATTACATCTCTTACTTTTGCTCAATGGGCTACAAAAACTCTGCCATATCTTTTCTAACAGAGCAAAAAACAGAGTGCCCATCAAAACCCCAAATTTCTTTGTTGGATCTTAATCTACCTTCCATAACACTCCCAGCACTTACAAACTCAACCACTATCACTCGAACTGTCACTAATGTTGGTAATTTGACCTCCATTTACAAAGCTTTGATTCACCCTCCAATGGGAATCAATGTCACTGTGGACCCTCTTGTCTTACTCTTCAATGCTACTGTCACCAATTTGTCCTTCAAGGTTATGATTTCAACCCTTTTAGAGATGGATTATGGTTTTTCTTTCGGAGCTATCATTTGGAGTGATGGAGTGCATCTTGTTAAAACTCCATTGTCTGTTAGAACTCAAATTCTACATTCTTCTACGTAG 2529 44.44 MMVVAISLEQLNQRMRISLQVPKLNHIYKHFNIVMPCSIHVFLHINQTNLSNTLLSISNFSRQNNMKNRRCFLLALFFYALIFEKLTVKPEASGKLLHIVHLEHNQHDPNSSIVEIHHNFLSTLLGSKKKASKSMVYSYTHAFSGFAAKLTKSQAYQLSEMRGVVRVLPNVLYDLHTTRSWDFLGLSPSPSPSNLLQMSNLGDGIIIGVVDTGIWPESEAFDDQGLGPVPVRWKGECQSGEQFKATRDCNRKIIGAKWYVDGFIAEFGEFNRSAVKEFMSPRDSNGHGTQTASTAAGSFVKNVSYRGLGGGTARGGAPAARLAVYKACWSLPGGGGQCSAADVLKGMDDAVHDGVDVLSLSLGKSAPLFAEVDEENVVAIGSFRANMRNISVVCSAGNDGPSAETVINTSPWILSVAATSIDRTFLGSITLGNNNTFVSQTLYTRKEIGYSGLVYPRSGLNQIIAGLCDSITLVNGSNWMSGKVVLCFSTMVGMNPIAITRAVEAVKAGNGLGLIVARHPDDIWFTCDNDFPCFQVNFEVGTKIFYYIRATSSPIVKLSPSRTITGNPISAHIAYFSSRGPNSVAPAILKPDIGAPGVAILVATSPFDITNDGGFTIQTGTSIATPHISAIVALLKSLHPTWSPAAIKSAIITTAWSRHPSGVPILAEGSPHKLGNPFDYGGGIVNPNAAANPGLIYDMSTSDYISYFCSMGYKNSAISFLTEQKTECPSKPQISLLDLNLPSITLPALTNSTTITRTVTNVGNLTSIYKALIHPPMGINVTVDPLVLLFNATVTNLSFKVMISTLLEMDYGFSFGAIIWSDGVHLVKTPLSVRTQILHSST 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21740772 21745928 + ClCG07G008160.1 Cla07g00778 276766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00778 842 Pfam Peptidase inhibitor I9 98 176 IPR010259 -
Cla07g00778 842 ProSiteProfiles Serine proteases, subtilase domain profile. 180 691 - -
Cla07g00778 842 SUPERFAMILY Subtilisin-like 73 760 IPR036852 GO:0004252|GO:0006508
Cla07g00778 842 CDD PA_subtilisin_like 428 558 - -
Cla07g00778 842 PANTHER PEPTIDASE S8 93 840 - -
Cla07g00778 842 PRINTS Subtilisin serine protease family (S8) signature 202 221 IPR015500 -
Cla07g00778 842 PRINTS Subtilisin serine protease family (S8) signature 283 296 IPR015500 -
Cla07g00778 842 PRINTS Subtilisin serine protease family (S8) signature 619 635 IPR015500 -
Cla07g00778 842 Gene3D - 422 565 - -
Cla07g00778 842 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 93 840 - -
Cla07g00778 842 Gene3D - 708 836 - -
Cla07g00778 842 CDD Peptidases_S8_3 173 656 IPR034197 -
Cla07g00778 842 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 84 176 IPR037045 -
Cla07g00778 842 Pfam Fibronectin type-III domain 738 833 IPR041469 -
Cla07g00778 842 Pfam Subtilase family 202 655 IPR000209 GO:0006508|GO:0008236
Cla07g00778 842 Gene3D Peptidase S8/S53 domain 204 704 IPR036852 GO:0004252|GO:0006508
Cla07g00778 842 ProSitePatterns Serine proteases, subtilase family, serine active site. 620 630 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01234 Cla-Chr1:24647940 Cla07g00778 Cla-Chr7:21740772 2.07E-177 dispersed
Cla07g00778 Cla-Chr7:21740772 Cla08g01611 Cla-Chr8:28719089 4.69E-150 dispersed
Cla07g00778 Cla-Chr7:21740772 Cla09g00096 Cla-Chr9:943443 2.08E-161 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00778 - - mcha:111008525 1163.67