Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00825 ATGGCTACGTTCGTGGAGCCACCGAACGGATTCAGATCAATGGGGAAGCATTATTACACAATGTGGCAAACTCTCTTTGAAATTGATACTAAATATATTCCAATCAAGCCAATTGGGCGAGGAGCTTATGGTGTGGTGTGTTCTTCGATTAACCGAGAGACCAACGAGAAAGTGGCGATCAAGAAGATTCATAATGTGTTTGAGAATCGCACGGACGCCATGAGAACACTGAGGGAGCTGATGCTTCTGAGGCATATAAGGCATGAGAATGTGATTGCTTTGAAGGATGTGATGATGCCAATCCATAGAAAAAGCTTTAAGGATGTTTATTTGGTTTATGAACTTATGGATACGGATCTTCATCAGATTATCAAGTCCCCTCAGCCACTTTCCAATGATCATTGCAAGTACTTTATCTATCAGTTGCTCTGCGGGTTGCAGTATCTTCATTCGGCAAACATTCTTCACCGGGACTTGAAGCCCGGGAACCTCCTTGTCAATGCTAACTGCGATCTAAAGATATGCGATTTCGGGTTGGCACGAACTAGCATGGGCCGTGACCAGTTCATGACTGAGTATGTTGTTACTCGCTGGTATCGCGCTCCAGAGCTTCTCCTCTGCTGTGACAACTATGGAACTTCCATTGATGTATGGTCTGTGGGATGCATCTTTGCTGAGATTCTAGGTCGCCAACCTATTTTCCCTGGGACGGAATGCCTCAACCAACTTAACTTAATCATCAATATTCTTGGTAGTCCAAAGGAAGCAGATATCGAGTTCATTGCCAATGGAAAGGCCAGAAATTATATCAAGGCAATGCCCTTCTCGAGAGGAATACGCCTTTCGCATCTATATCCACACGCTGAACCTTTAGCTTTAGATTTGTTACAGAAGATGCTTGTGTTTGATCCAACTAAGAGAATTACTGTTGACGAAGCACTTCAACATCCATACATGTCAGGGCTATACGACCCGAGATTCAACCCTCCTGTTGAGGTTCCCCTCACTCTTGACATTGACGACTCACTTACGGAGCCTAAGATCAGGGAAATGATGTTGAACGAGATGCTGTATTACCATCCGGAAGCTGTTTCAGGATATTATTGA 1107 44.08 MATFVEPPNGFRSMGKHYYTMWQTLFEIDTKYIPIKPIGRGAYGVVCSSINRETNEKVAIKKIHNVFENRTDAMRTLRELMLLRHIRHENVIALKDVMMPIHRKSFKDVYLVYELMDTDLHQIIKSPQPLSNDHCKYFIYQLLCGLQYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSMGRDQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRQPIFPGTECLNQLNLIINILGSPKEADIEFIANGKARNYIKAMPFSRGIRLSHLYPHAEPLALDLLQKMLVFDPTKRITVDEALQHPYMSGLYDPRFNPPVEVPLTLDIDDSLTEPKIREMMLNEMLYYHPEAVSGYY 368
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 22897719 22900155 + ClCG07G008670.1 Cla07g00825 276813
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00825 368 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Cla07g00825 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Cla07g00825 368 Pfam Protein kinase domain 35 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00825 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00825 368 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00825 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 364 - -
Cla07g00825 368 Gene3D Phosphorylase Kinase; domain 1 19 115 - -
Cla07g00825 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cla07g00825 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Cla07g00825 368 Gene3D Transferase(Phosphotransferase) domain 1 116 340 - -
Cla07g00825 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cla01g01942 Cla07g00825 CCT
Cla01g01942 Cla07g00825 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00323 Cla-Chr6:4131335 Cla07g00825 Cla-Chr7:22897719 5.00E-139 dispersed
Cla07g00825 Cla-Chr7:22897719 Cla08g01463 Cla-Chr8:27534927 0 dispersed
Cla07g00825 Cla-Chr7:22897719 Cla01g00234 Cla-Chr1:2370951 1.79E-139 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80685 PF00069 Pkinase 3.30E-70 CL0016 Cla PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00825 K20537 - csv:101203896 706.057