Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g00825 | ATGGCTACGTTCGTGGAGCCACCGAACGGATTCAGATCAATGGGGAAGCATTATTACACAATGTGGCAAACTCTCTTTGAAATTGATACTAAATATATTCCAATCAAGCCAATTGGGCGAGGAGCTTATGGTGTGGTGTGTTCTTCGATTAACCGAGAGACCAACGAGAAAGTGGCGATCAAGAAGATTCATAATGTGTTTGAGAATCGCACGGACGCCATGAGAACACTGAGGGAGCTGATGCTTCTGAGGCATATAAGGCATGAGAATGTGATTGCTTTGAAGGATGTGATGATGCCAATCCATAGAAAAAGCTTTAAGGATGTTTATTTGGTTTATGAACTTATGGATACGGATCTTCATCAGATTATCAAGTCCCCTCAGCCACTTTCCAATGATCATTGCAAGTACTTTATCTATCAGTTGCTCTGCGGGTTGCAGTATCTTCATTCGGCAAACATTCTTCACCGGGACTTGAAGCCCGGGAACCTCCTTGTCAATGCTAACTGCGATCTAAAGATATGCGATTTCGGGTTGGCACGAACTAGCATGGGCCGTGACCAGTTCATGACTGAGTATGTTGTTACTCGCTGGTATCGCGCTCCAGAGCTTCTCCTCTGCTGTGACAACTATGGAACTTCCATTGATGTATGGTCTGTGGGATGCATCTTTGCTGAGATTCTAGGTCGCCAACCTATTTTCCCTGGGACGGAATGCCTCAACCAACTTAACTTAATCATCAATATTCTTGGTAGTCCAAAGGAAGCAGATATCGAGTTCATTGCCAATGGAAAGGCCAGAAATTATATCAAGGCAATGCCCTTCTCGAGAGGAATACGCCTTTCGCATCTATATCCACACGCTGAACCTTTAGCTTTAGATTTGTTACAGAAGATGCTTGTGTTTGATCCAACTAAGAGAATTACTGTTGACGAAGCACTTCAACATCCATACATGTCAGGGCTATACGACCCGAGATTCAACCCTCCTGTTGAGGTTCCCCTCACTCTTGACATTGACGACTCACTTACGGAGCCTAAGATCAGGGAAATGATGTTGAACGAGATGCTGTATTACCATCCGGAAGCTGTTTCAGGATATTATTGA | 1107 | 44.08 | MATFVEPPNGFRSMGKHYYTMWQTLFEIDTKYIPIKPIGRGAYGVVCSSINRETNEKVAIKKIHNVFENRTDAMRTLRELMLLRHIRHENVIALKDVMMPIHRKSFKDVYLVYELMDTDLHQIIKSPQPLSNDHCKYFIYQLLCGLQYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSMGRDQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRQPIFPGTECLNQLNLIINILGSPKEADIEFIANGKARNYIKAMPFSRGIRLSHLYPHAEPLALDLLQKMLVFDPTKRITVDEALQHPYMSGLYDPRFNPPVEVPLTLDIDDSLTEPKIREMMLNEMLYYHPEAVSGYY | 368 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 22897719 | 22900155 | + | ClCG07G008670.1 | Cla07g00825 | 276813 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g00825 | 368 | SUPERFAMILY | Protein kinase-like (PK-like) | 24 | 326 | IPR011009 | - | |
Cla07g00825 | 368 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 11 | 364 | - | - | |
Cla07g00825 | 368 | Pfam | Protein kinase domain | 35 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla07g00825 | 368 | ProSiteProfiles | Protein kinase domain profile. | 32 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla07g00825 | 368 | SMART | serkin_6 | 32 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla07g00825 | 368 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 11 | 364 | - | - | |
Cla07g00825 | 368 | Gene3D | Phosphorylase Kinase; domain 1 | 19 | 115 | - | - | |
Cla07g00825 | 368 | ProSitePatterns | MAP kinase signature. | 67 | 170 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cla07g00825 | 368 | ProSitePatterns | Protein kinases ATP-binding region signature. | 38 | 62 | IPR017441 | GO:0005524 | |
Cla07g00825 | 368 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 340 | - | - | |
Cla07g00825 | 368 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 154 | 166 | IPR008271 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla01g01942 | Cla07g00825 | CCT | |
Cla01g01942 | Cla07g00825 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g00323 | Cla-Chr6:4131335 | Cla07g00825 | Cla-Chr7:22897719 | 5.00E-139 | dispersed | |
Cla07g00825 | Cla-Chr7:22897719 | Cla08g01463 | Cla-Chr8:27534927 | 0 | dispersed | |
Cla07g00825 | Cla-Chr7:22897719 | Cla01g00234 | Cla-Chr1:2370951 | 1.79E-139 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80685 | PF00069 | Pkinase | 3.30E-70 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g00825 | K20537 | - | csv:101203896 | 706.057 |