Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00844 ATGACATTCCATTTTCCGTCAATGGATTTCATTTTGCAAAATATTCAGAGTTCGCCATTGCTATTCTTCATTGTGCCTCTAGTGCTCCTTCTTCTCACTTCTGTTCTCCGGCGGCCGCCGCGGCTGCCACTCCCTCCGGGGCCTAAAGGGCTACCCATCATCGGCAATATGCGGATGATAGACCAACTCACCCACCGTGGACTTGCCGCCATGGCCAAACGGTATGGCGGAATCTTCCACCTCCGCATCGGCTTCCTCCACATGGTTGCCATTTCCGATCCCGATGTTGCTTGGAATGTTCTTCAGGTACAAGATCTAGTGTTTTCAAACCGTCCAACAACCAAAGCCATAAAGTACTTAACATACGAGCGAGCCGACATGGCATTCGCTCACTACGGCCCATTCTGGCGACAAATGAGAAAAGTATGTGTCATGAAATTATTCAGCCGCAAACGAGCCGAGTCATGGGCATCGGTTCGACATGAGGTTCATAATCTCATCACCACAATTGCCAACAACACACAAGCCCCTCTCAACCTTGGCCACTTAATCTTCACAATGAGCATTAATATAATTTACAGGGCTGCCTTTGGGACAATCGAACCACAACACCAATCCCAATTCATCAAAATACTGGAAGAATTCTCCAAGCTTTTTGGAGCTTTCAATGTTGCTGATTTTTTCCCTTGTCTTGCCTGGATCGATCCTCAAGGTCTCAATCCTAGACTTGTCGAGGCTCGTCGATCTCTCGACTGGTTCATCGATAGAATCATTGACCAACATTTGGTGAACAGGAGGAAAATAGAGGAAATTGATAAGGACATGGTTGATGAGCTACTAGCTTTCTATAATGAAGATGGCGGAGGAAGTAACGAAAGTGAGTTAGAGGATTTGCAATTGCAAAATGCTATCAAACTCACTAGAGACAATATCAAAGCCATCATAATGGACGTAATGTTTGGCGGCACAGAAACAGTTGCCTCCGCCATAGAATGGGCTATGGCGGAGCTCATGAAGAACCCCGATGACCTCAACAAACTTCAACAAGAACTCACCGCTGCCGTCGGCCTTCACCGGTGTCCACAAGAATCCAACTTAGAGAATCTAACATACCTAAAATGCATTCTCAAGGAAACTCTCCGGCTCCACCCACCCATTCCGCTACTCCTCCACGAGACGGCCGCCGAAACGGAACTCGCCGGCTACCGGATTCCTGCGAAGTCCCGCGTCTTCATCAACGCATGGGCACTCGGGCGGGACGAGAAGTCGTGGGTGGACCCAAACAGTTTCCGGCCGGCGAGGTTCGAAAGCAACGGCGCCGCCGACTTCAAAGGCGGAAACTTTGAGTTCATTCCATTCGGGTCGGGCCGTCGGTCTTGCCCCGGAATGCAGCTGGGGATTTACACGGTGGAGATGGCGGTAGCGAATTTGGTACATTGTTTCCGGTGGGAGTTGCCGGAAGGGATGAAGTCCGGGGAGTTGGACATGAATGACGTTTTTGGACTCACTGCGCCCAGAGCGAGTCGACTCGTGGCTATTCCGTACAAGAGAGTTGTTTGTAGTTTGGACTGA 1572 49.75 MTFHFPSMDFILQNIQSSPLLFFIVPLVLLLLTSVLRRPPRLPLPPGPKGLPIIGNMRMIDQLTHRGLAAMAKRYGGIFHLRIGFLHMVAISDPDVAWNVLQVQDLVFSNRPTTKAIKYLTYERADMAFAHYGPFWRQMRKVCVMKLFSRKRAESWASVRHEVHNLITTIANNTQAPLNLGHLIFTMSINIIYRAAFGTIEPQHQSQFIKILEEFSKLFGAFNVADFFPCLAWIDPQGLNPRLVEARRSLDWFIDRIIDQHLVNRRKIEEIDKDMVDELLAFYNEDGGGSNESELEDLQLQNAIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKNPDDLNKLQQELTAAVGLHRCPQESNLENLTYLKCILKETLRLHPPIPLLLHETAAETELAGYRIPAKSRVFINAWALGRDEKSWVDPNSFRPARFESNGAADFKGGNFEFIPFGSGRRSCPGMQLGIYTVEMAVANLVHCFRWELPEGMKSGELDMNDVFGLTAPRASRLVAIPYKRVVCSLD 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23484197 23488089 - ClCG07G008890.2 Cla07g00844 276832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00844 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 Pfam Cytochrome P450 45 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 8 522 - -
Cla07g00844 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Cla07g00844 523 Gene3D Cytochrome P450 33 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g00844 523 PANTHER CYTOCHROME P450 84A1-RELATED 8 522 - -
Cla07g00844 523 SUPERFAMILY Cytochrome P450 45 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00489 Cla-Chr2:4807358 Cla07g00844 Cla-Chr7:23484197 0 dispersed
Cla07g00844 Cla-Chr7:23484197 Cla01g01872 Cla-Chr1:33534605 4.68E-126 dispersed
Cla03g01432 Cla-Chr3:29908591 Cla07g00844 Cla-Chr7:23484197 1.19E-74 transposed
Cla01g01960 Cla-Chr1:34243021 Cla07g00844 Cla-Chr7:23484197 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00844 K09755 - vvi:100267863 682.559