Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00854 ATGTACCAGAGAGATATTGTTGCTGCTGCCGATTCCTTCGATTCCAATGATTTCCAACTCGCTCATGTCATATTGGACCGCCTCAATCAACGCCTTCAATCCGCCTCCTCCACTAACCCCCTTCACAGGGCCGCTTTCTTCTTCATTGAAGCTCTTCAATCTCTCCTCTCTCCCTCTCCCAACCGCCATAATCGTCTCTCTTCCTGGCCCGATATCGTCCATACTATTAAGGCCTACAAGACCTTCTCTGTAATTTCTCCGATTCCCATGTTTTCTCACTTCACCACCAATCAGGCCCTTCTCGAAGCTCTTAACGCTTCCTCTTTCATTCATATTGTTGATTTCGATATTGGATTTGGAGGGCAGTACGCCTCTTTCATGAAGGAGATTGCTGATAAAGCAGAATCCAAGAACATGGTTCCACCGGTGCTTCGGATTACCGCCGTCGTGCCTGAGGAGTTTGCGATTGAGAGTAGGTTGATTAGAGAGAATCTTTGCCAGTTCGCTCAGGATTTGAAAATTCGATTTCATATAGATCTCGTGCCGCTTCGAACTTTCCAGACGTTGTCTTTTAAATCCGTGAAATTCATGGAAGGGGAGAAGGCGGCGATACTGTTGACTCCGACCATCTTTCGCCGTCTCGGGAGTGTAAACATCATAGCCTCTTTTCTTGCCGATATTCGGCGGGTATCGCCGTGTGTCGTCGTATTCGTCGACGGCGAAGGGTGGCCGGACTCTGGCGCGGCGTCGTTTAAGAGGAATTTGGTGAAAAATTTGGAGTTCTACGCCACGATGCTAGAGTCGCTGGACGCGGCGGGTGTTGGCGGTGAGTGGGTGCGGAGGATTGAGACGTTCGTACTCCGACCAAAGATATTCGCGACGGTAGAAGGGGCAAGGGAAATGGCGGTGGCGCCGTGGAGGGAGGTGTTCCACGGAGCGGGGATGAGGCCGGTGGCGCTGAGCCAGTTTGCGGATTTTCAAGCGGAGTGCTTACTTGGCAAAGTACAGGTTCGAGGGTTCCAAGTAGGCAAACGATATGCTGAGCTGGTGCTGTGCTGGCATGAGAGGCCTCTCGTCGCCACGTCGGCATGGAGGTGTTAA 1101 51.59 MYQRDIVAAADSFDSNDFQLAHVILDRLNQRLQSASSTNPLHRAAFFFIEALQSLLSPSPNRHNRLSSWPDIVHTIKAYKTFSVISPIPMFSHFTTNQALLEALNASSFIHIVDFDIGFGGQYASFMKEIADKAESKNMVPPVLRITAVVPEEFAIESRLIRENLCQFAQDLKIRFHIDLVPLRTFQTLSFKSVKFMEGEKAAILLTPTIFRRLGSVNIIASFLADIRRVSPCVVVFVDGEGWPDSGAASFKRNLVKNLEFYATMLESLDAAGVGGEWVRRIETFVLRPKIFATVEGAREMAVAPWREVFHGAGMRPVALSQFADFQAECLLGKVQVRGFQVGKRYAELVLCWHERPLVATSAWRC 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23847324 23850251 - ClCG07G008990.1 Cla07g00854 276842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00854 366 ProSiteProfiles GRAS family profile. 1 365 IPR005202 -
Cla07g00854 366 PANTHER SCARECROW-LIKE PROTEIN 15 5 365 - -
Cla07g00854 366 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 5 365 IPR005202 -
Cla07g00854 366 Pfam GRAS domain family 4 365 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00854 Cla-Chr7:23847324 Cla10g00261 Cla-Chr10:3189905 2.17E-65 dispersed
Cla07g00852 Cla-Chr7:23787507 Cla07g00854 Cla-Chr7:23847324 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61418 PF03514 GRAS 7.10E-84 CL0063 Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00854 - - csv:116401665 642.499