Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00865 ATGGAAGCTGGTGAAATTTCCGGCATAAATTATTTTGGTCTTAAATCTTGGCCGGAATTTCACTGCTTTGGTAAGAGAGAGATGAGTTCAACGTACGATGAGAGTGCTCTGGGGCCCGACTCTCCATCCCAGCCCGCCGCTCCACCGCCAGATCCATCGTCTTCGTCGTCACCTCCACCGTCATTGTCACCACCTTCTCCCGATCGCAACTCCGATTACTCTCCTCCACCATCACCAGAAAACGATGATGGCTCATCCGATAAGTCCTCACCACGCCCATCAGGTTCTATAAATCATCATCATCATCATCTTACTTCTCGCCTGGAGTTACCAATTTTCAATTATTATCATATGGTAGATTCTCCATCTCCAAAGTCGCCGTCGAATGGTTCTTCCGATGATAACAAATCCCCTCCAGCTCCAAAAGAGGGTAACCAGCGATCACCGCCGCACGTTTCTCATTCTCCTCCATCCCGATCTTCGTCACCGGCAGATGCATTGCCTCCACCAGAAGGAAAGGCATCACCGAAATCGTCTGGAGCAAGACAGCAAGCAACGCCGTCGTCCGAGGGCGATTCATCACCGTCGGAGATCAACCCAGGGGTTATAATTGGGGTGGCGGTGGGGGTGGGCGTTTTCATAATTGTTCTCATATCAATAATTGCAGTGTGTTCAAAGAAGAAGAAGAGAAAGGGGGATCCTATGCAATATTATGGAGATCATGGTCATGGACCTAAAGGTGGTGACTATTACAACAGTTCACAGCAACAAAACTGGCACAACGGCATGCACGGTCCAGGGACGGATCAATTTGGGAGGCCACCGGTATCGGGGTCTCCAGCCGGGAACGGGTGGCCAATGAGTGGCGACAACATGACGACGGGCAGCACCTACACGGGGCCTCCTCTTCCTCCGCCATCACCATCGATCGCCTTTGGGTTCAACAAGAGCACGTTCACCTACGACGAACTCGCAGCAGCAACAGGTGGGTTCGCACACGGGAACCTGCTCGGGCAGGGCGGGTTCGGGTATGTGCACAAGGGGGTGCTGCCCAATGGGAAGGAGGTGGCCGTTAAGAGCCTGAAGGTGGGCAGCGGGCAGGGTGAGAGGGAGTTCATGGCTGAAGTTGAGATTATTAGCAGAGTCCATCATCGGCATTTGGTTTCCTTGGTTGGCTTTTGCATTGCCGGTGGACAAAGAATGTTGGTCTATGAGTTTGTTCCTAACAACACCTTGGAACATCACCTTCATGCTCCTATAGTAAGGATTATTTTTAATTCTTCCTCCGTTTTCATGATGAATTTTTGGGTTTCAGGCAAAGGTCTCCCAGTAATGGATTGGCCAACCAGACTTCGTATTGCAATAGGTTCTGCCAAGGGTCTTGCTTATCTCCATGAAGATTGTCATCCAAAGATTATTCATCGAGATATCAAGTCAGCTAATATTCTGATCGATGCCAATTTTGAAGCAATGGTGGCTGATTTTGGATTGGCTAAGCTATCCTCAGATAATCATACACATGTCTCCACTAGAGTCATGGGTACATTCGGGTATTTGGCACCAGAATATGCATCAAGTGGAAAGTTGACAGAAAAATCTGATGTATTCTCGTTCGGTGTAATGTTGTTGGAACTCATCACAGGAAAACGACCCGTAGATCCTACTCAAGCCATGGAGGATAGCTTAGTTGATTGGGCTCGACCACTAATGAGCCGGGCATTGATGGAAGGCATCTACGAGGAGTTGGTGGATGTGCGTTTAGAGAATGAGTTCAACACACAAGAAATGGCTCGCATGGTGGCTTGTGCTGCAGCGTCCATTCGCCACTCGGCTAGAAAACGCCCCAAAATGAGCCAGGTGGTTCGAGCCTTAGAAGGAGATGTTTCCTTGGACGACTTAAACGAAGGCATAAGACCTGGGCAAAGCTCCATCTATAGCGCCGCTAGCTCTGATTACGACTCCAGCGCCTACCATGCCGACATGTCGAAATTCAGGAAGATCGCTTTGTCGGACGACAGTAGTGAACTCGCCACTTCCAGCAACGACTCCAGAGAGATGAACCATCCCGGCCCGGGGACCCAAAGGCCGCTCTTTTGA 2097 49.93 MEAGEISGINYFGLKSWPEFHCFGKREMSSTYDESALGPDSPSQPAAPPPDPSSSSSPPPSLSPPSPDRNSDYSPPPSPENDDGSSDKSSPRPSGSINHHHHHLTSRLELPIFNYYHMVDSPSPKSPSNGSSDDNKSPPAPKEGNQRSPPHVSHSPPSRSSSPADALPPPEGKASPKSSGARQQATPSSEGDSSPSEINPGVIIGVAVGVGVFIIVLISIIAVCSKKKKRKGDPMQYYGDHGHGPKGGDYYNSSQQQNWHNGMHGPGTDQFGRPPVSGSPAGNGWPMSGDNMTTGSTYTGPPLPPPSPSIAFGFNKSTFTYDELAAATGGFAHGNLLGQGGFGYVHKGVLPNGKEVAVKSLKVGSGQGEREFMAEVEIISRVHHRHLVSLVGFCIAGGQRMLVYEFVPNNTLEHHLHAPIVRIIFNSSSVFMMNFWVSGKGLPVMDWPTRLRIAIGSAKGLAYLHEDCHPKIIHRDIKSANILIDANFEAMVADFGLAKLSSDNHTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDPTQAMEDSLVDWARPLMSRALMEGIYEELVDVRLENEFNTQEMARMVACAAASIRHSARKRPKMSQVVRALEGDVSLDDLNEGIRPGQSSIYSAASSDYDSSAYHADMSKFRKIALSDDSSELATSSNDSREMNHPGPGTQRPLF 698
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24038856 24047067 + ClCG07G009100.2 Cla07g00865 276853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00865 698 MobiDBLite consensus disorder prediction 75 93 - -
Cla07g00865 698 MobiDBLite consensus disorder prediction 29 103 - -
Cla07g00865 698 MobiDBLite consensus disorder prediction 121 161 - -
Cla07g00865 698 MobiDBLite consensus disorder prediction 262 304 - -
Cla07g00865 698 MobiDBLite consensus disorder prediction 119 198 - -
Cla07g00865 698 MobiDBLite consensus disorder prediction 42 74 - -
Cla07g00865 698 MobiDBLite consensus disorder prediction 177 196 - -
Cla07g00865 698 Pfam Protein tyrosine and serine/threonine kinase 334 623 IPR001245 GO:0004672|GO:0006468
Cla07g00865 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Cla07g00865 698 Gene3D Transferase(Phosphotransferase) domain 1 432 635 - -
Cla07g00865 698 SUPERFAMILY Protein kinase-like (PK-like) 300 624 IPR011009 -
Cla07g00865 698 MobiDBLite consensus disorder prediction 672 698 - -
Cla07g00865 698 MobiDBLite consensus disorder prediction 672 688 - -
Cla07g00865 698 Gene3D Phosphorylase Kinase; domain 1 307 406 - -
Cla07g00865 698 CDD STKc_IRAK 337 626 - -
Cla07g00865 698 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 434 676 - -
Cla07g00865 698 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 50 418 - -
Cla07g00865 698 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 434 676 - -
Cla07g00865 698 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 50 418 - -
Cla07g00865 698 SMART serkin_6 331 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00865 698 MobiDBLite consensus disorder prediction 284 298 - -
Cla07g00865 698 ProSiteProfiles Protein kinase domain profile. 331 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00865 698 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00852 Cla-Chr6:12743205 Cla07g00865 Cla-Chr7:24038856 0 dispersed
Cla07g00865 Cla-Chr7:24038856 Cla11g00502 Cla-Chr11:5689932 2.53E-126 dispersed
Cla11g00420 Cla-Chr11:4778874 Cla07g00865 Cla-Chr7:24038856 1.13E-120 dispersed
Cla07g00865 Cla-Chr7:24038856 Cla11g00221 Cla-Chr11:2548037 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80686 PF07714 PK_Tyr_Ser-Thr 1.30E-44 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00865 - - csv:101214995 951.429