Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00891 ATGAACTCATCATCCACAAAATTTTACAATCCAGGAAGGATGGGATTGTATGAACCTCTCCACCATATTGGAATGTGGGGAGAAACCTTTAGAACCAGTGCCAATTTAGATGCACAATCCTCCTTTATTATTGAAGCTGATACCAAGCTTGAAACTCAGTCGGATGATGCTTCACTCGGCTCACTTGGAGATCCTCATGTATATGACCAAGATGATACCAAACGCATTGATAAGATTCAAAGACGGCTGGCACAAAATCGGGAAGCAGCTCGCAAAAGCCGGCTGCGGAAAAAGGCCTATATTAAGCAATTGGAAACAAGCCGTGTAAAACTCATTCAATTGGAGCAAGAGCTTGAAAAGGCAAGACAACAAGGTCTCTTGGCTGGATCCCGATTTGACAATAACCAGTTGGGTTTATCAGGAACCACAAATTCAGGCATCTCCGCATTTGAATCAGAGTATGAGCAATGGGTGGAGGAGCAGAACAGGCAGATTTGTGATCTGAGGACTGCTGTGCATGCTGATATTACTGATATCGAGCTTCGAATACTTGTCGAAAATGCAATGAGACACTACTTTAAATTTTTTCGCATGAAAGCTAAAGCTGCAAAAGCCGATGTCTCTTACATAATGTCAGGCATGTGGAAAACATCGGCCGAAAGACTTTTCTTATGGATTGGAGGATTTCGACCTTCAGAACTCCTCAAGGTTTTGATACCTCAGCTGGAGACATTAACCGAACAACAAATTTCGGAAACTGGTAGCCTTAGGAAATCTTGTCTACAAGCAGAAGATGCTCTTAGACAAGGTATGGAAAAACTACAACAAAATCTATTTGAGAGCGTAGTGGCTGGTCAGCTGGGTGAAGGAAGTCATCCTCTACAAATGACTGCTGCAATGGAGAGATTAGAAGCGCTCATTAGCTTTGTGAATCAGGCTGACCATCTACGACAGGAAACATTGCAACAGATGTACAAAATTCTATCGACTCGACAATCTGCTCAAGGCCTTCTTATTCTTGGAGAGTTTTTCCAACGACTCCGAGCATTGAGCTCACTTTGGGCTAATCGTCCTTGTGAGCCTGCATAG 1089 43.07 MNSSSTKFYNPGRMGLYEPLHHIGMWGETFRTSANLDAQSSFIIEADTKLETQSDDASLGSLGDPHVYDQDDTKRIDKIQRRLAQNREAARKSRLRKKAYIKQLETSRVKLIQLEQELEKARQQGLLAGSRFDNNQLGLSGTTNSGISAFESEYEQWVEEQNRQICDLRTAVHADITDIELRILVENAMRHYFKFFRMKAKAAKADVSYIMSGMWKTSAERLFLWIGGFRPSELLKVLIPQLETLTEQQISETGSLRKSCLQAEDALRQGMEKLQQNLFESVVAGQLGEGSHPLQMTAAMERLEALISFVNQADHLRQETLQQMYKILSTRQSAQGLLILGEFFQRLRALSSLWANRPCEPA 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24567343 24574552 - ClCG07G009350.1 Cla07g00891 276879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00891 362 Gene3D - 77 127 - -
Cla07g00891 362 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Cla07g00891 362 Coils Coil 97 124 - -
Cla07g00891 362 SUPERFAMILY Leucine zipper domain 79 120 IPR046347 GO:0003700|GO:0006355
Cla07g00891 362 Pfam Seed dormancy control 164 239 IPR025422 GO:0006351|GO:0043565
Cla07g00891 362 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Cla07g00891 362 PANTHER TRANSCRIPTION FACTOR TGA1 1 361 - -
Cla07g00891 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
Cla07g00891 362 PANTHER TRANSCRIPTION FACTOR TGA9 1 361 - -
Cla07g00891 362 SMART brlzneu 74 136 IPR004827 GO:0003700|GO:0006355
Cla07g00891 362 Pfam bZIP transcription factor 77 115 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00891 Cla-Chr7:24567343 Cla11g00770 Cla-Chr11:11078086 1.09E-123 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61426 PF14144 DOG1 1.80E-28 No_clan Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00891 K14431 - csv:101208419 681.404