Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00900 ATGTCGGTCGCTAACGCCGACACATCTCTGACTATGTCGGACGTCTCGACAGTCGAGAAAAGCAGCCCGGCGGAGAGGGCTGAGTGGGTGGCAAACCCACCAGAGCCGCCAGGGATATGGCGAGAGGTAATCGAGTCTCTCCGTGACACCATGTTTCCCGATCCGAACAAGCTTTCGTCCCTGAAGAACAAGACCGGAACTGCGGTGGTTGGAAGCCTCTTGCAGGGTGTGTTCCCTATCCTCTGCTGGGGACAGAGCTACAATCTGGGGAAGTTCAAGAATGACATCTTGGCTGGTTTGACCCTGGCTAGCCTCTGCATTCCCCAGAGTATTGGATATGCAAATCTGGCTAAACTTGATCCTCAATATGGGCTGTATACAAGCATTGTGCCACCCCTGGTTTATGCAGTGTTGGGAAGTTCGAGGGAAATAGCAATCGGACCGGTGGCCATAGTATCTCTACTTTTGCCGTCAATGATTCAGAAAATTCAAGATCCCGCCGCCGACCCTCTTGCCTACAAAAACCTTGTGTTCACCGTCACTTTCTTCGCCGGAATCTTTCAGGCCGCCTTTGGACTCTTTCGGCTGGGGTTTTTGGTGGATTTTCTGTCACATGCTGCCATAGTTGGGTTCATGGGTGGAGCTGCCATTGTAATTGGGCTTCAACAGCTCAAAGGATTGCTTGGCATCACTCACTTCACTAACAAAACTGATATTCTATCTGTTATGGAAGCTGTGTTTGGATCATTCCATCATCATAATGATCAATGGAATCCCTTCAACTTCATCATTGGCTCTTCATTCCTGTCCTTCATCCTCATCACCAAATTATTGGGGAAGAAGTACAAGAAAGTATTCTGGTTAGCTGCCATAGCTCCACTGTTGTGTGTAATCCTATCGACGCTTTTGGTGTTCCTCACAAGAGCCGACCGGCAGGGTGTGAAGATCGTCAAACGAGTCCCCGCCGGCCTGAACCCCATCTCGGCTCGCCACATCCAAATCCACTCCCCTCACTTCTCCCAAATCCTCAACGCCGCCTTCATCGTGGCCGTCATAGCCCTCACGGAGGCCATTGCTGTGGGGAGGTCACTGGCGTCCATGAAAGGTTACAACATTGATGGGAACAGAGAAATGGTTGCGTTAGGCTTCATGAACCTAGCAGGCTCTCTCACTTCTTGCTACGCAGCAACAGGTTCTCTGTCACGGTCGGCGGTTAATTTCAGTGCCGGGTGCGAGACCGTGGTTTCGAACGTGGTGATGGCGGTGACGGTGATGATATCATTGGAGATGTTCACCAAGCTCCTCTACTTCACTCCCAACGCCATTCTTGCTTCCATTATTCTATCTGCACTTCCAGGCCTCATTGATCTTCACAAAGCTTATAATATCTGGAAGATCGACAAGCTCGACTTCTTGGCTTGCCTTGCAGCTTTTCTTGGTGTTCTCTTTCTCTCCGTCGAATTCGGCCTCCTCCTTTCGTTAGTGATATCATTTGCAAAGATAATAGTAATCTCAATCAAACCTGGGACTGAGATATTGGGAAAACTCCCTGGAAGTCATACCTTCTGTGATATTCATCAATATCCAATGGCTCTCAATACTCCTGGAGTCCTCATCATCCGTGTTAAATCTGGCTTACTTTGCTTTGCAAATGCCAACTTCGTCAAAGATAGGATTCTGAGGTTCATCAGCAGCCAAGATGATGCATCAGCAAAGAGAATCACTCACTTCCTAGTCATTGATCTCTCCAACTTAATGAACATTGACACTTCAGGAATTGCTTCTCTTGAAGAGCTGCAGAATAGTTTGGCGGCCAGTGGAATAGAGTTGGCCATTGCAAATCCAAAGTGGCAAGTGATTCACAAGCTAAAGGTAGCAAATTTTGTTGCCAAGCTCAAAGGGAGGGTGTTCTTGAGTGTTGGGGAAGCTGTGGATGCTTGCCTTACAGCTAAAATGGGAGCTATCTAA 1968 48.37 MSVANADTSLTMSDVSTVEKSSPAERAEWVANPPEPPGIWREVIESLRDTMFPDPNKLSSLKNKTGTAVVGSLLQGVFPILCWGQSYNLGKFKNDILAGLTLASLCIPQSIGYANLAKLDPQYGLYTSIVPPLVYAVLGSSREIAIGPVAIVSLLLPSMIQKIQDPAADPLAYKNLVFTVTFFAGIFQAAFGLFRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGITHFTNKTDILSVMEAVFGSFHHHNDQWNPFNFIIGSSFLSFILITKLLGKKYKKVFWLAAIAPLLCVILSTLLVFLTRADRQGVKIVKRVPAGLNPISARHIQIHSPHFSQILNAAFIVAVIALTEAIAVGRSLASMKGYNIDGNREMVALGFMNLAGSLTSCYAATGSLSRSAVNFSAGCETVVSNVVMAVTVMISLEMFTKLLYFTPNAILASIILSALPGLIDLHKAYNIWKIDKLDFLACLAAFLGVLFLSVEFGLLLSLVISFAKIIVISIKPGTEILGKLPGSHTFCDIHQYPMALNTPGVLIIRVKSGLLCFANANFVKDRILRFISSQDDASAKRITHFLVIDLSNLMNIDTSGIASLEELQNSLAASGIELAIANPKWQVIHKLKVANFVAKLKGRVFLSVGEAVDACLTAKMGAI 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24742834 24751320 - ClCG07G009450.2 Cla07g00900 276888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00900 655 Pfam Sulfate permease family 92 476 IPR011547 GO:0016021
Cla07g00900 655 ProSiteProfiles STAS domain profile. 544 647 IPR002645 -
Cla07g00900 655 Gene3D STAS domain 507 650 IPR036513 -
Cla07g00900 655 MobiDBLite consensus disorder prediction 1 20 - -
Cla07g00900 655 MobiDBLite consensus disorder prediction 1 33 - -
Cla07g00900 655 Pfam STAS domain 528 643 IPR002645 -
Cla07g00900 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Cla07g00900 655 CDD STAS_SulP_like_sulfate_transporter 528 638 - -
Cla07g00900 655 PANTHER SULFATE TRANSPORTER 2.2 24 652 IPR030315 GO:0008272|GO:0015116
Cla07g00900 655 PANTHER SULFATE TRANSPORTER 24 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cla07g00900 655 SUPERFAMILY SpoIIaa-like 534 647 IPR036513 -
Cla07g00900 655 TIGRFAM sulP: sulfate permease 79 638 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00900 Cla-Chr7:24742834 Cla11g01499 Cla-Chr11:28656522 0 dispersed
Cla07g00900 Cla-Chr7:24742834 Cla03g00847 Cla-Chr3:11307918 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00900 K17469 - csv:101213063 1108.59