Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00932 ATGTCGAAAGAAGTGACGGAAGAGGGACAGTCCGGTCTGAGAAAGGACTACGTCGACCCCCCGCCGGCGCCGCTCATCGACGCCGCCGAACTCACTCTCTGGTCCTTCTACAGAGCCCTAATCGCTGAGTTCATCGCCACTCTCCTCTTCCTCTACGTCACAATCGCCACCGTCATCGGCAACAACAAACAAACCAAAATGTGCGACGGCGTCGGAATCCTCGGAATCGCCTGGGCCTTCGGCGGCATGATTTTCGTCCTCGTCTACTGCACCGCTGGAATCTCCGGTGGTCATATTAATCCGGCGGTGACATTCGGGCTGTTTCTCGCGAGGAAAGTGTCACTGATTAGAGCGGTGGGGTACATGGTGGCGCAGTGCGCCGGAGCCGTCGTCGGCGTTGGGTTGGTTAAGGCTTTTATGAAGCATGATTATAACAACAACGGCGGCGGAGCCAACGCCGTTAATTCTGGTTACAGTAGGGGAACAGCTCTTGGTGNTTTTTTTTTTTTTTTTTTCTCTTTT 522 54.02 MSKEVTEEGQSGLRKDYVDPPPAPLIDAAELTLWSFYRALIAEFIATLLFLYVTIATVIGNNKQTKMCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVGYMVAQCAGAVVGVGLVKAFMKHDYNNNGGGANAVNSGYSRGTALGXFFFFFFSF 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25408662 25409269 + ClCG07G009790.1 Cla07g00932 276920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00932 174 Pfam Major intrinsic protein 31 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cla07g00932 174 Gene3D Glycerol uptake facilitator protein. 23 174 IPR023271 -
Cla07g00932 174 PANTHER AQUAPORIN PIP-TYPE-RELATED 1 166 - -
Cla07g00932 174 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Cla07g00932 174 SUPERFAMILY Aquaporin-like 30 164 IPR023271 -
Cla07g00932 174 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 166 IPR034294 -
Cla07g00932 174 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cla07g00932 174 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cla07g00932 174 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00932 Cla-Chr7:25408662 Cla05g02143 Cla-Chr5:33021643 1.14E-80 dispersed
Cla07g00932 Cla-Chr7:25408662 Cla02g00420 Cla-Chr2:4119110 1.91E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00932 K09872 - csv:101209627 309.301