Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00945 ATGGCGACCGGCTTTCTGCTATCACTCTTCTTCTTCACTCCGCCATTAGGAGAGGTGACCCTTCATCTTCCAGCGATGAAACAGCGGCTTCGTTTTGGTTGCGCTGTCAGTTCTGAAACAATGTTCATCGATGGATCTATGTTTCTCTCTATCCCTTTTCTTGCTTTCTACTTAACCTTCTATTTCTACTCCCTCTCACAATCCCATGCCGGACGCTATCTGCTGCTTCTCCTTTGCATTCTGGTGAAACATGTTACAAGCAATGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTTCCCTAATGGGAAGAGTGAAGATCTAGCTGCAACTCGAATTCAAAATGCATTTCGCGCATTTACGGCCAGAAAGGATGTACATAATTCGAAAGTGCCAGAGAGATGCCAGGATCTAATTCAAGGTGGAATGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGACTCTGTATGGTCACGGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGCAGAATGGTGCGGTGGGTCCGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTGAGCCCGGCTTCATACAGCCTTGATAAAGAAAACTGGGGATGGAGCTGGAAGGACAGATGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACCATTCCAAAGAAGCCAGATATTCTTCGTCGAACAGCAAGGGGAGTTCAAAGGCCAGAAATTCTGCTATACCCAACAGCTGAAACAAGCTACAAGAAGCTGAAGGTTTTAAGGAAGTTGGTGAGGCAAAACAAATTTCTCTTGGATTCACTAATGCAAACATCATAG 999 44.84 MATGFLLSLFFFTPPLGEVTLHLPAMKQRLRFGCAVSSETMFIDGSMFLSIPFLAFYLTFYFYSLSQSHAGRYLLLLLCILVKHVTSNGEQVHVKTGKSNGFPNGKSEDLAATRIQNAFRAFTARKDVHNSKVPERCQDLIQGGMATKQVLSFIHSWSRMQQEIRARRLCMVTEYRVKQKKLENQLKLEAKIHELEAEWCGGSETKEEILFKIQQREEAAVRRERAMAYAFSHQWRANSILDLSPASYSLDKENWGWSWKDRWIAARPWEIRANTHPTIPKKPDILRRTARGVQRPEILLYPTAETSYKKLKVLRKLVRQNKFLLDSLMQTS 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25630415 25640059 + ClCG07G009940.2 Cla07g00945 276933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00945 332 PANTHER IQ-DOMAIN 5-RELATED 92 288 - -
Cla07g00945 332 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 92 288 - -
Cla07g00945 332 Coils Coil 178 198 - -
Cla07g00945 332 ProSiteProfiles IQ motif profile. 108 136 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g02298 Cla-Chr1:36827952 Cla07g00945 Cla-Chr7:25630415 5.28E-26 dispersed
Cla01g02299 Cla-Chr1:36831252 Cla07g00945 Cla-Chr7:25630415 3.65E-23 dispersed
Cla07g00945 Cla-Chr7:25630415 Cla09g01991 Cla-Chr9:37477381 3.40E-30 dispersed
Cla07g00945 Cla-Chr7:25630415 Cla05g02129 Cla-Chr5:32875646 2.08E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00945 - - cmo:103492919 380.948