Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00957 ATGATAATTACACCCCCTTTCCTGGATCTGGATATTGATGCATTTTACCAATTGGTTTGTGTGAACAGTGAAAACCCTTCAAACAATATCTTCAAAACTAAAGAATCTAAGCTGGAATGTAACCCGGAGTTCTTGCATTCGAGGCGAAGGCTTTTCCAATCAAGCTTTCCTGGGGAACCAAATATTGAGGAATGTCTCATGCAATTCCTGCTTAAGGGTCTCAATGTAACAGGAACGTTTCCAGCTGAATTTGGTAATCTTACTCATCTGCAGGAACTTGATCTTACTCGCAACCATATTATTGGCCAGCTACCCAGTAGTCTTGCCAATGCTCCTCTAGTCAAACTTTCTCTCTTGGGAAACAGGCTAAACGGTTCAATTCCCAAGGAAATTGGTGACATTGGCACACTCGAAGAGCTGGTCTTGGAAGACAACCAGCTAACTGGAAGTCTACCTGCCAGCCTTGGAAATCTGCACGGTTTGAGAAGACTGCTTCTGTCTGCAAACAATTTCACAGGAAAAATACCAGACTCATTTGGAAACTTAAAGAACTTGGTCGATTTTAGGATAGACGGGAATGGGCTGTCTGGGAAGATTCCTGAATTCATTGGGAATTTGATCAACCTCGACAGACTGGATATACAAGGAACATCGATGGAAAATCCCATTCCTTCGACAATATCTCAATTGAAGAACCTGACTCAATTGAGGATATCTGACTTGAAGGGATCATTTATAAGTTTCCCCGATTTGACTGATATGATAAACATGGAGGAATTGGTCCTGAGGAACTGTTTAATTAATGGCTCAATCCCCGAGTATATTGGAGAAATGAACAAATTATCAACTCTAGATCTAAGCTTCAACCATTTAACTGGTCCAATTCCTGAGACATTTCAGAATCTGATGAAGAAAAAGATAGACTTCATGTTTCTGACAAACAACTCACTGAGTGGTGAAGTGCCTGGTTGGATCTTGAGTAGCAAAAAGAACATAGATTTGTCTTACAACAACTTTTCAGGGTCTACTCTTGCTAGTTGCCAACAATCACCTGTGAACTTGATTGCGAGTTACCCACCTGCAGTGAATCATCAAAAGACCTTCCATGCTCTGGAAAAGCTGAATATTGTTCTCATTGCAACTGCAGATCATTCCTTGTTTATTAATTGTGGAGGAACTAGATTGACGGCTGATGGGCATGATTATGAAGAGGACTTAACTACAGAAGGCAAGTCAAACTTCTTTTCTGTTTCAGAAAAATGGGCTTACAGCAGTACAGGAGTTTTTTTGGGTGATGAAAATGCTGACTATATAGCTTCAAATAAGCTTGGCCTGAATGTGAGTGGTCCACGGTATTATCAAAATGCTCGACTTTCCCCTCTCTCCCTCAAATATTATGGCCTTTGCCTGCGGAGCGGAAGCTACAATGTGAAGCTCCACTTTGCTGAAATTATGTACACTAATGATCAAACTTTTAGCAGCCTGGGAAAGCGTATATTCGATATATCAATTCAAGGAAAACTAGTGAAGAAGGATTTCAATATTATGGAGGCAGCTGGGGGTGTTGGTAAGAACTTCACAGTGGAAGATAAAAATGTTCTTGTCAATGGCAGTACCCTTGAGATTCATCTATATTGGGCTGGTAAAGGAACCACAGCTGTGCCAGACAGAGGAGTTTATGGACCCCTTATTTCTGCTATCACAGTTACGCCAAGTAAGTTCTTTCCTGCACTTTTAGATGCTGGGGCACTTGCCGGCATCATAATTTCTTCATGTGCAGTAGTCATCATACTGGTTGTAGTATTTCTTTGGATGACAGGTTACATATGTAAGAAGGAAGTCCTAGATAATGAACTTTCTGGTGTAGATTTACAAACGGGTCATTTTACCTTGAAACAAATTAAAGCTGCCACCAACAACTTTGATCCTAAAAGTAAAATAGGCGAAGGTGGATTTGGGCCTGTCTACAAGGGTGTACTGTCAGATGGTGCTTTGATTGCCGTGAAGCAACTCTCCTCGAAATCGAAGCAAGGGAGCCGTGAGTTTGTTACTGAGATTGGCATGATATCTGCATTGCAACACCCAAACCTTGTTAAGCTCTATGGCTGCTGCGTTGAGGGAAACCAATTGTTGCTTGTATATGAATACATGGAAAATAATAGTCTTGCCCGTGCACTTTTCGGTCGAGAGGAACAAAGGCTACATCTTGACTGGCGAACAAGGAAGAAGATATGCTTGGAAATAGCTAGGGGATTAGCTTACCTTCATGAAGAATCAAGGTTAAAAATCGTTCACAGAGACATAAAGGCCACAAACGTACTGCTCGATAAAGATCTTAATGCTAAGATTTCTGACTTTGGTTTGGCTAAGCTTGACGAAGAGGAGAACACCCACATCAGCACACGAATTGCTGGAACCATCGGTTATATGGCACCCGAGTATGCAATGAGAGGATACTTGACTGATAAGGCAGATGTTTACAGCTTTGGAATTGTTGCCTTAGAGATAGTTAGTGGGAAAAGTAACACAAATTACAGGCCAAAGGAAGAGTTTGTTTATCTTCTTGATTGGGCCTATGTACTGGAAGAGCAAGGCAACCTTCTAGAACTGGTAGATCCAGACCTTGGTTCAAATTACTCATCCGAGGAAGCAATGAGGATGCTGAACGTAGCTCTCTTATGCACCAACCCATCTCCCACTCTCAGACCCGCAATGTCTTCTGTGGTGAGTATGCTTGAGGGTAAGATTGCAGTCCAAGCACCGATCATCAAGCGCACTTCGTCCGGCCAAGATCCAAGGTTTAGAGCCTTTGAGAAGCTCTCACACGACAGCCGATCGCAGGTTTCAAGCTCAACGGTTTCGCTAGATGCTGAGCCTCAAAAAAGCATGTTAATGGATGGGCCATGTACTGATTCTTCAGTGTCCATTGATACCAATGCCAATAATCTGTATCAATCTGCATCAAGTGATCCCCTCCAGAATCATCGTCATGTGGATAATATGAAACTATCAGCTAACGGTTCAATTTCCAGTTTACTTTCCCGAAACCCGGTTCACCATCCAACGGTTCGCTCTATCGCTGGTGTCGCTCAAGCTCGTCTCGATAGTGTCGCCCTCGCTCTCGCTAGTAAAAGACAGAGCGAACCATTGGATGGTGAACCGGGTTTTGGGAAAGTAAATTGGAAATTGAACCGCTTATCAGGAAGAGAAAATGTGTTGATAGGGAAAGAAGACAATAATTTGAGTGCTGAGGAAGATGATTTTTGGGTATTAACGTCATTTCACCATGTGGGATCCATCTCTGAAACTCTGAAACTCTGA 3321 42.34 MIITPPFLDLDIDAFYQLVCVNSENPSNNIFKTKESKLECNPEFLHSRRRLFQSSFPGEPNIEECLMQFLLKGLNVTGTFPAEFGNLTHLQELDLTRNHIIGQLPSSLANAPLVKLSLLGNRLNGSIPKEIGDIGTLEELVLEDNQLTGSLPASLGNLHGLRRLLLSANNFTGKIPDSFGNLKNLVDFRIDGNGLSGKIPEFIGNLINLDRLDIQGTSMENPIPSTISQLKNLTQLRISDLKGSFISFPDLTDMINMEELVLRNCLINGSIPEYIGEMNKLSTLDLSFNHLTGPIPETFQNLMKKKIDFMFLTNNSLSGEVPGWILSSKKNIDLSYNNFSGSTLASCQQSPVNLIASYPPAVNHQKTFHALEKLNIVLIATADHSLFINCGGTRLTADGHDYEEDLTTEGKSNFFSVSEKWAYSSTGVFLGDENADYIASNKLGLNVSGPRYYQNARLSPLSLKYYGLCLRSGSYNVKLHFAEIMYTNDQTFSSLGKRIFDISIQGKLVKKDFNIMEAAGGVGKNFTVEDKNVLVNGSTLEIHLYWAGKGTTAVPDRGVYGPLISAITVTPSKFFPALLDAGALAGIIISSCAVVIILVVVFLWMTGYICKKEVLDNELSGVDLQTGHFTLKQIKAATNNFDPKSKIGEGGFGPVYKGVLSDGALIAVKQLSSKSKQGSREFVTEIGMISALQHPNLVKLYGCCVEGNQLLLVYEYMENNSLARALFGREEQRLHLDWRTRKKICLEIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPDLGSNYSSEEAMRMLNVALLCTNPSPTLRPAMSSVVSMLEGKIAVQAPIIKRTSSGQDPRFRAFEKLSHDSRSQVSSSTVSLDAEPQKSMLMDGPCTDSSVSIDTNANNLYQSASSDPLQNHRHVDNMKLSANGSISSLLSRNPVHHPTVRSIAGVAQARLDSVALALASKRQSEPLDGEPGFGKVNWKLNRLSGRENVLIGKEDNNLSAEEDDFWVLTSFHHVGSISETLKL 1106
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25743733 25755156 - ClCG07G010050.1 Cla07g00957 276945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00957 1106 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 268 - -
Cla07g00957 1106 Pfam Protein tyrosine and serine/threonine kinase 644 910 IPR001245 GO:0004672|GO:0006468
Cla07g00957 1106 PANTHER - 266 325 - -
Cla07g00957 1106 SMART LRR_typ_2 134 157 IPR003591 -
Cla07g00957 1106 SMART LRR_typ_2 87 111 IPR003591 -
Cla07g00957 1106 SMART LRR_typ_2 158 181 IPR003591 -
Cla07g00957 1106 SMART LRR_typ_2 278 301 IPR003591 -
Cla07g00957 1106 Gene3D Transferase(Phosphotransferase) domain 1 717 924 - -
Cla07g00957 1106 Pfam Malectin domain 386 567 IPR021720 -
Cla07g00957 1106 Gene3D Ribonuclease Inhibitor 227 377 IPR032675 -
Cla07g00957 1106 SMART serkin_6 641 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00957 1106 Pfam Leucine rich repeat 136 195 IPR001611 GO:0005515
Cla07g00957 1106 PANTHER - 381 961 - -
Cla07g00957 1106 ProSiteProfiles Protein kinase domain profile. 641 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00957 1106 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 266 325 - -
Cla07g00957 1106 ProSitePatterns Serine/Threonine protein kinases active-site signature. 763 775 IPR008271 GO:0004672|GO:0006468
Cla07g00957 1106 Gene3D Phosphorylase Kinase; domain 1 609 716 - -
Cla07g00957 1106 SUPERFAMILY L domain-like 64 339 - -
Cla07g00957 1106 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 381 961 - -
Cla07g00957 1106 SUPERFAMILY Protein kinase-like (PK-like) 624 924 IPR011009 -
Cla07g00957 1106 Gene3D - 383 573 - -
Cla07g00957 1106 PANTHER - 48 268 - -
Cla07g00957 1106 Pfam Leucine Rich Repeat 89 109 IPR001611 GO:0005515
Cla07g00957 1106 Pfam Leucine Rich Repeat 280 302 IPR001611 GO:0005515
Cla07g00957 1106 CDD STKc_IRAK 647 914 - -
Cla07g00957 1106 MobiDBLite consensus disorder prediction 945 967 - -
Cla07g00957 1106 Gene3D Ribonuclease Inhibitor 22 226 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00397 Cla-Chr5:3604551 Cla07g00957 Cla-Chr7:25743733 3.07E-06 dispersed
Cla07g00957 Cla-Chr7:25743733 Cla09g02163 Cla-Chr9:39277179 0 dispersed
Cla07g00957 Cla-Chr7:25743733 Cla11g01693 Cla-Chr11:30524384 8.46E-13 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80688 PF07714 PK_Tyr_Ser-Thr 3.00E-49 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00957 - - csv:101211151 1687.16