Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00969 ATGACGTCGGGGACGAGGCTACCGACATGGAGGGAGCGGGAGAACAACAAGAGAAGAGAGAGAAGGAGAAGAGCTATTGCGGCAAAGATCTTTGCCGGACTCAGGATGTACGGGAACTACAAGCTTCCCAAGCATTGCGACAACAATGAGGTCCTTAAAGCTCTCTGCAATGAGGCGGGATGGACCGTCGAACCTGATGGTACCACTTACCGGTTTTGGCTAGTATTTAGCCTGATAACTGCTCTTCCTTTCCATGGTGGCAGATTTAATCAGAGGGATCTTTCTCTTTTTTGCTTTTCTTTTTCAATGGCAAGTTCAGGAAGTAAAGTACACGCTGACATCTATAACCCCCTGTTGAGTAGCTCTTGGTCTTGGGGATGCAAGCCAATTGAACGTATGGATGTGGTTGGTGGATCAGCAGCTGCAAGCCCGTACGCATCTCACCAACCAAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGTTCATCTTCTTTTCCAAGTCCAGCATCATCCTCATATGTTGGTAATCCGAATGCTGACGGAAGTTCGCTTATACCCTGGCTCAAAAACCTTTCAACGTCATCATCTTCAGCATCCTCGTCTAAACTCCCAAATCATTATATTCATGGAGGTTCCATCAGTGCTCCGGTAACTCCTCCTCTGAGTTCCCCAACTGCTAGAACGCCCCGACTCAAAGCTGACTGGGAAGACCAATCTGTCCTACCAGGATGGAGTGCACAATACTATTCCTCCCAGCCATCTTCTACTCCACCAAGTCCTGGGCGTCAGATTCTTCCCAATCCAGAATGGTTTGCTGGCCTTAGAATTCCTCAGGGTGGACCCAATTCTCCAACATTTAGTCTTGTCTCGACAAACCCATTTGGTTTCAAGGAAGCAGCAATGACTGGTGGAGGATCTCGCATGTGGACCCCTGGTCAAAGTGGGACCTGCTCTCCTGCCATTGCAGCAGGCTCCGATCACACTGCAGATATTCCAATGTCAGAAGTCATCTCTGATGAGTTCGCCTTTGGAAGCAATGCAGCAGGAATAGTGAAGCCATGGGAAGGAGAACGAATTCATGAAGAATGTGGTTCAGATGACCTAGAACTCACTCTTGGAAACTCAAGGACCAGGTTTGTTGATGCTTCTAATCAACTCTCAAACTCTTTCCATTTCACGAATTGCTTCTCTTCCTAA 1197 48.04 MTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRFWLVFSLITALPFHGGRFNQRDLSLFCFSFSMASSGSKVHADIYNPLLSSSWSWGCKPIERMDVVGGSAAASPYASHQPSPCASFNPSPGSSSFPSPASSSYVGNPNADGSSLIPWLKNLSTSSSSASSSKLPNHYIHGGSISAPVTPPLSSPTARTPRLKADWEDQSVLPGWSAQYYSSQPSSTPPSPGRQILPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAAMTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNAAGIVKPWEGERIHEECGSDDLELTLGNSRTRFVDASNQLSNSFHFTNCFSS 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25883743 25886446 - ClCG07G010170.2 Cla07g00969 276957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00969 398 MobiDBLite consensus disorder prediction 246 267 - -
Cla07g00969 398 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 192 IPR008540 -
Cla07g00969 398 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 1 71 - -
Cla07g00969 398 MobiDBLite consensus disorder prediction 1 20 - -
Cla07g00969 398 PANTHER BES1/BZR1 HOMOLOG PROTEIN 4 126 381 - -
Cla07g00969 398 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 71 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cla07g00969 398 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 126 381 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00693 Cla-Chr3:8378055 Cla07g00969 Cla-Chr7:25883743 8.83E-116 dispersed
Cla07g00969 Cla-Chr7:25883743 Cla07g01060 Cla-Chr7:27179744 9.87E-16 dispersed
Cla07g00969 Cla-Chr7:25883743 Cla08g01510 Cla-Chr8:27895970 1.73E-27 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61433 PF05687 BES1_N 2.00E-60 No_clan Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00969 - - csv:101210002 561.607