Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g00984 ATGGCAATTTCCCATTTAGTACCTTATTATTCGCCTCTTCTACGCTTTTCTCTCCCTTCGACAAAGCTCACTCCTCAACTCCATTCTCACAGATACCGCTTCTTCTCCCTCCGTGCTTCTATGGCGTCTTCACCTGCTCGCAAGGTTTTGGTTCCGGTTGCCAACGGCACCGAGCCGCTTGAGGCAGTCATCACCATTGACGTGCTTCGACGTGCTGGAGCTGATGTTACCGTTGCTTCCGTCGAGAATCATATTCGTGTTGATGCTGCGCATCAGATCAAGATTGTTGCGGATTCTCTCATTTCCGATTGCGCGGATACTGTTTTCGATCTCATCGCCCTTCCTGGAGGTATGCCAGGTGCTACCAGTCTTAGAGATTGTGAAGTTTTGCAGAACATAGTGAAGAAGCAAGCTGCAGATGGTCGACTTTATGCTGCCATCTGTGCTTCACCTGCAGTGGTGCTTGGATCATGGGGTTTGCTGAAAGGGTTGAAAGCCACATGCTATCCATCATTTATGGAGCAACTGGGATCTACTGCAACTGCTGTTGAATCCCGAGTACAGATTGATGGCCAAGTTGTGACAAGTCGTGGGCCTGGTACTACCTTGGAGTTTGCCGTTGCTCTGGTTGAGCAGTTGTATGGGAAAGAAAAAGCTGACGAAGTTTCTGGACCTCTGTTGTTGCGTTCCAACCATGGTCATGAATATACCATAGCTGAGCACAATCAAGTAAAGTGGACATTTGATGATGGCCCAAGGATTCTTGTACCTATAGCTAATGGTACTGAGGAAATGGAGGCTGTTATGATCATTGACATTCTTCGGAGAGCAAAAGGGAAAGTGGTGGTGGCTTCTGTTGAGGACAAACTAGAGATTCTTGCATCTCGAAAAGTTAAACTGGAGGCAGATTTACTTCTTGACGAAGCTGCTGAAAAGTCATACGATCTAATTGTTTTGCCTGGAGGGCTTGGTGGCGCGGAAGCATTTGCAAAATCTGAAAAACTGATTAATTTGCTAAAAAAGCAGGGAGAATCAAACAAACCCTATGGAGCAATATGTGCATCCCCGGCTTTGGTCTTAGAACCCCACGGCTTGCTGAAGAATAAGAAAGCCACTGCTTTTCCTGCATTATGTGACAAATTGTCCGACAAAAGCGAAATTGAAAACAGAGTGGTGGTTGACGGAAACCTGATTACAAGCCGAGGACCTGGAACTACGATGGAATTTTCTCTGGCAATCGTGGAGAAGCTTTTTGGAAGGGATACAGCAGTTCAACTGGGAAAAACAATGCCGGCGTGGAGGTATAATCTTCTTCATTTCGGTTCGTTCAAACGCACTGTTCATCTTAAGAACCACGAATTCCACCCGCAAATTCTGAATTTTGAACTCTGTTCTTGTTGCGGTCAGAACTGTCGGAGACTTGTTGCGGTCGAGAGATTGTTGGATCAGAAGTTGAACATAATAGAAGTTGTGATGCCTTGTTTCTGTTTTAGTTCTAAAAGAAACAGAGATTCGTTGGATGCCCAAACAATTGCAGCAGTTGAAGAGATTTCAAATATTCCGAACGTTCGCTTGTACTCATACGAAGAACTTAGAAAAGCAACTGAAAATTTCAGGTCTGGAAACAAACTTGGGCAGGGAGGTTTTGGATCTGTCTACAAGGGAAGGCTCGGAAATGGAACCCTGGGTGCCATAAAGGTACTGTCCATGGATTCAAGGCAAGGGATGCGGGAGTTTTTGGCAGAAATCAATGTGATCTCAGTTATAAACCACGATAACTTGGTTACGTTGCATGGTTGTTGTGTCGAAGGGCAGCACCGGATCTTGGTCTATCCGTACCTAGAAAATAGCAGTCTTGACAAGATGCTTTTTGGTAGAGGACATGGGAATATTCAATTAAATTGGCAAACAAGGTGCAAAATATGCATTGGCATTGCACAGGGGCTAGCGTTCCTTCATGAGGAGGTTCAGCCGCATGTTATACATAGGGACATCAAGGCAAGCAATATCCTGCTTGATAAGGATTTAACCCCAAAAATTTCTGATTTTGGTCTTGCTAGACTACTCCCTGCTCACTTGACCCATGTTAGTACACGTGTTGCCGGGACAACGTATGGGAGCATCATGAGAAAGGGCAATTGCTGGAATTGGTAG 2154 45.26 MAISHLVPYYSPLLRFSLPSTKLTPQLHSHRYRFFSLRASMASSPARKVLVPVANGTEPLEAVITIDVLRRAGADVTVASVENHIRVDAAHQIKIVADSLISDCADTVFDLIALPGGMPGATSLRDCEVLQNIVKKQAADGRLYAAICASPAVVLGSWGLLKGLKATCYPSFMEQLGSTATAVESRVQIDGQVVTSRGPGTTLEFAVALVEQLYGKEKADEVSGPLLLRSNHGHEYTIAEHNQVKWTFDDGPRILVPIANGTEEMEAVMIIDILRRAKGKVVVASVEDKLEILASRKVKLEADLLLDEAAEKSYDLIVLPGGLGGAEAFAKSEKLINLLKKQGESNKPYGAICASPALVLEPHGLLKNKKATAFPALCDKLSDKSEIENRVVVDGNLITSRGPGTTMEFSLAIVEKLFGRDTAVQLGKTMPAWRYNLLHFGSFKRTVHLKNHEFHPQILNFELCSCCGQNCRRLVAVERLLDQKLNIIEVVMPCFCFSSKRNRDSLDAQTIAAVEEISNIPNVRLYSYEELRKATENFRSGNKLGQGGFGSVYKGRLGNGTLGAIKVLSMDSRQGMREFLAEINVISVINHDNLVTLHGCCVEGQHRILVYPYLENSSLDKMLFGRGHGNIQLNWQTRCKICIGIAQGLAFLHEEVQPHVIHRDIKASNILLDKDLTPKISDFGLARLLPAHLTHVSTRVAGTTYGSIMRKGNCWNW 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26039257 26054254 + ClCG07G010320.2 Cla07g00984 276972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g00984 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Cla07g00984 717 Pfam DJ-1/PfpI family 253 415 IPR002818 -
Cla07g00984 717 Pfam DJ-1/PfpI family 47 212 IPR002818 -
Cla07g00984 717 SUPERFAMILY Class I glutamine amidotransferase-like 47 228 IPR029062 -
Cla07g00984 717 SMART serkin_6 538 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00984 717 ProSiteProfiles Protein kinase domain profile. 538 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00984 717 CDD GATase1_DJ-1 254 417 - -
Cla07g00984 717 SUPERFAMILY Class I glutamine amidotransferase-like 253 431 IPR029062 -
Cla07g00984 717 Pfam Protein kinase domain 539 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g00984 717 Gene3D Phosphorylase Kinase; domain 1 509 613 - -
Cla07g00984 717 PANTHER BNAA06G01020D PROTEIN 43 429 - -
Cla07g00984 717 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 43 429 - -
Cla07g00984 717 CDD GATase1_DJ-1 49 213 - -
Cla07g00984 717 TIGRFAM not_thiJ: DJ-1 family protein 253 426 IPR006287 -
Cla07g00984 717 TIGRFAM not_thiJ: DJ-1 family protein 48 223 IPR006287 -
Cla07g00984 717 Coils Coil 283 303 - -
Cla07g00984 717 Gene3D Transferase(Phosphotransferase) domain 1 614 706 - -
Cla07g00984 717 Gene3D - 248 435 IPR029062 -
Cla07g00984 717 Gene3D - 40 241 IPR029062 -
Cla07g00984 717 SUPERFAMILY Protein kinase-like (PK-like) 517 704 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00984 Cla-Chr7:26039257 Cla07g01015 Cla-Chr7:26565312 7.14E-86 dispersed
Cla10g01021 Cla-Chr10:23699258 Cla07g00984 Cla-Chr7:26039257 1.06E-07 dispersed
Cla10g01022 Cla-Chr10:23715758 Cla07g00984 Cla-Chr7:26039257 1.05E-06 dispersed
Cla02g00606 Cla-Chr2:6646347 Cla07g00984 Cla-Chr7:26039257 2.00E-26 transposed
Cla11g01693 Cla-Chr11:30524384 Cla07g00984 Cla-Chr7:26039257 4.39E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80689 PF00069 Pkinase 4.90E-32 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g00984 K03152 - csv:101212934 774.622