Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01004 ATGTCGAGCAGCAACATGGGGCTGCGTTTTATGTCATACCCACGGAAGAATCTGCTGACGAAGTTCTCGTCTCTGTTCCCAATAAGTGCAATTCCCAGTATCAAGACTGTCAAAGGGGGTTTCTCTTGCAGTTGTAGTGTTGGTTGTCAATTCAACTTGGATGATTTTAGCAGCAAGAAGAGGCATTTGGAAAGAGTTCACTCCACCAATTCAAATGGGAAGTTTAGCAATAAGCAGTTTATTAGTGTTGATCCACAACTTTACGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGAAACTTCGTGAGGAGACTGCCTCAATGCGTGGTAGCAAAATGCAGGTAACCATTGCCAGTTCCATTGTTCCATTATCCCTATGTTTATGTTTAGATATTTTCTGTGAGCTTTCTGCAGTTCTTGTATCCCCCGATCAAGCACAACTTCTTGCAATGCTTGTTCAGATTCTTGGTGCTAAGAGGTGCATCGAAGTGGGTGTTTACACTGGATATTCGTCTTTGGCCGTAGCACTAGTCCTGCCAGAATCAGGGCATTTAGTTGCCTGTGAAAGAGATCTCAAATACCTTGAGGTTGCTAAAAGATATTATGAACTTGCCGGTGTTTCACACAAAGTGGATATGAGACATGGACTTGCAGCAGATACACTCAAATCACTTATTTCAAATGGTGAAGCTTGCAGTAGTAATTTAATATTCATAGTGAGCATGTGGGGTCTTGTGCTAATCTATGATTTTGCCTTCATCGATGCCGAGAAGAGGATGAATGAGGAATACTTCGAACTGCTCCTACAATTGGTCAGGGTTGGAGGCTTAATTGTGATCGATAATGTCCTTTGGTACGGAAAAGTAGCTGACCCAATGGTTAATGACAAGAAAACCGATAGCATCAGGAGATTGAATAAAAAGATAATGGAAGACAATCGAGTTGGGATAAGCATGGTACCTATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA 1008 42.06 MSSSNMGLRFMSYPRKNLLTKFSSLFPISAIPSIKTVKGGFSCSCSVGCQFNLDDFSSKKRHLERVHSTNSNGKFSNKQFISVDPQLYEYILSNVREPEILGKLREETASMRGSKMQVTIASSIVPLSLCLCLDIFCELSAVLVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGHLVACERDLKYLEVAKRYYELAGVSHKVDMRHGLAADTLKSLISNGEACSSNLIFIVSMWGLVLIYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADPMVNDKKTDSIRRLNKKIMEDNRVGISMVPIGDGMTICQKR 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26396788 26401335 + ClCG07G010560.2 Cla07g01004 276992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01004 335 PANTHER O-METHYLTRANSFERASE-RELATED 139 335 - -
Cla07g01004 335 Pfam O-methyltransferase 252 334 IPR002935 GO:0008171
Cla07g01004 335 Pfam O-methyltransferase 139 242 IPR002935 GO:0008171
Cla07g01004 335 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 141 335 IPR029063 -
Cla07g01004 335 PANTHER O-METHYLTRANSFERASE-RELATED 70 120 - -
Cla07g01004 335 Gene3D Vaccinia Virus protein VP39 66 335 IPR029063 -
Cla07g01004 335 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 139 335 - -
Cla07g01004 335 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 70 120 - -
Cla07g01004 335 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 102 335 IPR002935 GO:0008171
Cla07g01004 335 ProSitePatterns Zinc finger C2H2 type domain signature. 45 67 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01004 Cla-Chr7:26396788 Cla11g01344 Cla-Chr11:26893080 9.10E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01004 - - csv:101219267 496.508