Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01007 ATGGGAGAGGAAGTGAAGCTGTTAGATTTCTGGCCCAGCATGTTTGGGATGCGAGTTAGAATAGCGTTGGCTGAGAAGGGCGTGGCTTATGAGTACGTGGAAGAAGATCTGAAGAATAAGAGCCCTTTGCTTCTTCAAATGAACCCAATTCACAAGAAGATCCCTGTTCTTATTCACAATGGAAAACCCGTATGTGAATCTTCAATAATCGTTGAGTATATTGATGAAGTGTGGAAGGATAATGCTGCTTTGTTGCCTTCTGATCCTTATCAGAGAGCTCAGGCCAGGTTTTGGGTTGATTTCATCGATAAGAAGCTTTATGATGTTACAAGGAAGATATGGGGCAGCAAGGGAGAAGAGCATGAGACAGGAAAGAAGGAGGTAATAGAAATATTGAAGCAATTGGAAGAAGTTCTTGGAGAGAAGGATTACTTTGGAGGTGAAAGTTTGGGAATTGTAGACATTTCTTTGATTGGATTCTACAGTTGGTTTTATACCTATGAGACCATTGGCAACTTCAGCTTTGAGTCCGAGTGTCCAAAGATAGTGAGTTGGGGTAAGAGATGCTTGCAAAAGGAGAGTGTTGCCAAGTCCCTCCCTGACCCAAAAAAGATCTATGACTTTGTGGTTCAACTACAGAAAGCTTTGGGGGTTTGA 657 42.16 MGEEVKLLDFWPSMFGMRVRIALAEKGVAYEYVEEDLKNKSPLLLQMNPIHKKIPVLIHNGKPVCESSIIVEYIDEVWKDNAALLPSDPYQRAQARFWVDFIDKKLYDVTRKIWGSKGEEHETGKKEVIEILKQLEEVLGEKDYFGGESLGIVDISLIGFYSWFYTYETIGNFSFESECPKIVSWGKRCLQKESVAKSLPDPKKIYDFVVQLQKALGV 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26425770 26429278 + ClCG07G010600.1 Cla07g01007 276995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01007 218 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
Cla07g01007 218 PANTHER GLUTATHIONE S-TRANSFERASE PARC-RELATED 4 210 - -
Cla07g01007 218 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Cla07g01007 218 CDD GST_N_Tau 5 78 - -
Cla07g01007 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Cla07g01007 218 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Cla07g01007 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cla07g01007 218 Gene3D - 88 218 - -
Cla07g01007 218 SFLD Main (cytGST) 2 216 - -
Cla07g01007 218 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cla07g01007 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 -
Cla07g01007 218 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Cla07g01007 218 Gene3D Glutaredoxin 1 87 - -
Cla07g01007 218 Pfam Glutathione S-transferase, C-terminal domain 117 192 IPR004046 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00840 Cla-Chr1:10176907 Cla07g01007 Cla-Chr7:26425770 9.38E-94 dispersed
Cla05g02445 Cla-Chr5:35895016 Cla07g01007 Cla-Chr7:26425770 4.86E-42 dispersed
Cla06g01435 Cla-Chr6:27926213 Cla07g01007 Cla-Chr7:26425770 4.81E-45 dispersed
Cla11g00054 Cla-Chr11:710382 Cla07g01007 Cla-Chr7:26425770 9.06E-06 dispersed
Cla07g01007 Cla-Chr7:26425770 Cla07g01008 Cla-Chr7:26439179 8.33E-31 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01007 K00799 - csv:101218562 394.815