Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01008 ATGGACAAGAAGCTTTATGAAGCTGCAAAAGGGGTATGGGCAGGGAAAGGAGAGGAGCATGAGGCAGGGAAGAAGGAGGTGATACAAATATTGAAGCAACTAGAGGAAGTAATTGGAGAGAAGGCTTACTTTGCAGGTGATTGTTTGGGATTTGTTGATATTGGTTTGATTGGATACTACACTTGGTTTTATACCTATGAGACAATTGGGAACTTCAGCATTGAGTCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGTTTGCAAAATGAGAATGTGGCTAACTCCCTGGCTGACCCCAAGAATGTGTATGAATTTGTGGTTCAATGGAAGAAAATTTGGAAGGATAAAGCTCCTCTGTTGCCATCTGATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTAGATTTCATCGACAAGAAGCTTTTTGATGGTGGAAGGAAAATTTGGGCTACCAAAGGAGAGGAGCAAGAAGAAGGTAAGAAGGAGGTAATAGGAATATTGAAACAATTGGAAGAAGTTCTTGGGGAGAAGGGTTTGTTTGGAGGTGAATGTTTGGGATTTTTAGACATTGTTTTGATTGGATATTACACTTGGTTTTATGCCTACGAGACCATTGGAAACTTCAGCATTGAGGCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGCTTACAAAATGAGAGTGTTGCTAAGTCTCTGCCTGACCCCAAGAAGGTTTGGAGTGACAATGGGGAAGCTTATACTAATTTGCTTCCTTCTCATCCTTTTGACAGAGCCCATGCTAGGTTTTGGGTTGACTATGTGGACAAGAAGATTTATCCCATTGGAAGTAAGCTATGGAATAGAGAGAAGACAAAAGAGGAGAAAGAAGCAGCAGCAAAGGAATTGTTGGAGTGCTTTAAGCAGCTGGAAGAAGAGCTTGGAGAAAAAGACTATTTTGGTGGCCAAACATTTGGGATTATAGATATTGCTCTCATTCCATTTTACAGCATGTTTCTTGCATTCAAATTGCTTGGAAATTTGGATTTAGAAGTTGAATGTCCCAAGATCTTCCAATGGGTTAAGAGGACTTAA 1083 40.72 MDKKLYEAAKGVWAGKGEEHEAGKKEVIQILKQLEEVIGEKAYFAGDCLGFVDIGLIGYYTWFYTYETIGNFSIESECPKIMSWVKRCLQNENVANSLADPKNVYEFVVQWKKIWKDKAPLLPSDPYDRAQARFWVDFIDKKLFDGGRKIWATKGEEQEEGKKEVIGILKQLEEVLGEKGLFGGECLGFLDIVLIGYYTWFYAYETIGNFSIEAECPKIMSWVKRCLQNESVAKSLPDPKKVWSDNGEAYTNLLPSHPFDRAHARFWVDYVDKKIYPIGSKLWNREKTKEEKEAAAKELLECFKQLEEELGEKDYFGGQTFGIIDIALIPFYSMFLAFKLLGNLDLEVECPKIFQWVKRT 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26439179 26448738 + ClCG07G010610.1 Cla07g01008 276996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01008 360 CDD GST_C_Tau 2 108 IPR045074 GO:0004364|GO:0006749
Cla07g01008 360 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 250 359 IPR045073 -
Cla07g01008 360 CDD GST_C_Tau 126 242 IPR045074 GO:0004364|GO:0006749
Cla07g01008 360 Pfam Glutathione S-transferase, C-terminal domain 18 90 IPR004046 -
Cla07g01008 360 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 112 243 IPR045073 -
Cla07g01008 360 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 125 253 IPR010987 -
Cla07g01008 360 PANTHER GLUTATHIONE S-TRANSFERASE PARC-RELATED 112 243 - -
Cla07g01008 360 SUPERFAMILY GST C-terminal domain-like 2 113 IPR036282 -
Cla07g01008 360 CDD GST_C_Tau 258 359 IPR045074 GO:0004364|GO:0006749
Cla07g01008 360 SUPERFAMILY GST C-terminal domain-like 115 242 IPR036282 -
Cla07g01008 360 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 109 IPR045073 -
Cla07g01008 360 PANTHER GLUTATHIONE S-TRANSFERASE PARC-RELATED 250 359 - -
Cla07g01008 360 Coils Coil 289 309 - -
Cla07g01008 360 Pfam Glutathione S-transferase, C-terminal domain 291 359 - -
Cla07g01008 360 Pfam Glutathione S-transferase, C-terminal domain 160 225 - -
Cla07g01008 360 SUPERFAMILY GST C-terminal domain-like 251 359 IPR036282 -
Cla07g01008 360 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 257 360 IPR010987 -
Cla07g01008 360 PANTHER GLUTATHIONE S-TRANSFERASE PARC-RELATED 1 109 - -
Cla07g01008 360 Gene3D - 257 360 - -
Cla07g01008 360 Gene3D - 125 249 - -
Cla07g01008 360 Gene3D - 1 117 - -
Cla07g01008 360 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 107 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01008 Cla-Chr7:26439179 Cla04g00753 Cla-Chr4:22544159 1.32E-15 dispersed
Cla07g01007 Cla-Chr7:26425770 Cla07g01008 Cla-Chr7:26439179 8.33E-31 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01008 K00799 - csv:101217848 243.432