Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01009 ATGGAGGACGATTACTCTATCTTCCCTCCCGATTCAGATCTCGATTTCAGCTTCACGTCCACCGCCACCGACCGCACCTTCACCACCTCCTCCAGCGCTCGAACCAGCCTTGCTCGGAGCAGTCTAACACTCAGCTTCAATGAATCTCGTCTCTCTGCCGCTGCAGCCGCCGCCGCTGCCGTTGTTAACCTCCGCCCCCACCGCCACTCCGACCCTCACTGGTCCGCCATTAAAGCCGCTACTACTCTCTCTTCCGACGGCCATCTTCACCTCCGCCACCTCAAACTCATCCGCCATCTCGGTACCGGCAACCTCGGCCGTGTTTTCTTATGCCATTTGAGAGACAACGATCACGCCAGTTTCGCTTTGAAGGTGGTGGATAAGGAGGCTCTTAGTAATAAGAAGCTTTTGCAGGTCCAAACGGAAGCCGAGATTCTGGCTTCCTTGGACCACCCTTTTCTCCCAACTCTCTACGCGCGTCTCGACGTCTCTCACTACACGTGCCTCCTTATCGACTATTGTCCTGCCGGTGACCTCCATTCACTCCTCCGCAAACAGCCTGGTAACCGTCTTTCTGTCGCGGCGGCGAGATTCTTTGCCGCCGAGATCCTGGTGGCGCTCGAGTACCTTCACGCGCTTGGGATTGTGTACCGCGATCTCAAGCCTGAGAACGTTCTTTTGCGTGAGGATGGCCACGTCATGCTCTCGGATTTCGACTTGTGTTTTAAATCCGACGTGGTACCCACTTTTCATACGTGGACTCGCCCGGGACCACAGCCTGCTACCTGCTGCTTTGGATGGAAGACGGCGGAGGAGGAAGAGGAGATTGTCGGGGAGTTTGTGGCGGAGCCGACAGCGGCGTTTTCGAAGTCGTGCGTAGGGACTCATGAGTACTTGGCGCCCGAGTTAGTGACCGGTGGTGGCCACGGAAACGGCGTAGACTGGTGGGCGTTTGGGGTGTTCGTTTACGAGCTTCTGCACGGGACGACGCCGTTTAAAGGAGTGAATAAGGAGGGTACGTTAAGGAACATTGCGTCGTCGGAGGGGGTGAAGTTCCGGGCGGCGGCGGCGGAGGAAGAGGAAGGGATGGCGGACGCGAGAGATCTAATAGAGAGGCTGCTAGTGAAAGATCCGGCGAGGCGGTTGGGTTCCGGGAAAGGGGCGACGGAGATCAAACGGCATCCGTTCTTCGACGGGATAAAATGGCCGTTGATCAGGACATATCGGGCGCCGGAGGTGTATGGGCTGATGAGAAAAGCCAGATCCCACGTGAGCCACGTGACAGGCGTGACCCACCGCATGCGGCGGCGGGGCTGGTGGAACTGGAGGAAGCTCATTAGCAACCGTTTAATTAAAAATGGAAGTTCAAGTAAATCTCATACCAATACCAATTATTATAGTTATAGTTCCAAAAATAAGACGGGTTGA 1428 55.88 MEDDYSIFPPDSDLDFSFTSTATDRTFTTSSSARTSLARSSLTLSFNESRLSAAAAAAAAVVNLRPHRHSDPHWSAIKAATTLSSDGHLHLRHLKLIRHLGTGNLGRVFLCHLRDNDHASFALKVVDKEALSNKKLLQVQTEAEILASLDHPFLPTLYARLDVSHYTCLLIDYCPAGDLHSLLRKQPGNRLSVAAARFFAAEILVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKSDVVPTFHTWTRPGPQPATCCFGWKTAEEEEEIVGEFVAEPTAAFSKSCVGTHEYLAPELVTGGGHGNGVDWWAFGVFVYELLHGTTPFKGVNKEGTLRNIASSEGVKFRAAAAEEEEGMADARDLIERLLVKDPARRLGSGKGATEIKRHPFFDGIKWPLIRTYRAPEVYGLMRKARSHVSHVTGVTHRMRRRGWWNWRKLISNRLIKNGSSSKSHTNTNYYSYSSKNKTG 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26461792 26463219 - ClCG07G010620.1 Cla07g01009 276997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01009 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Cla07g01009 475 CDD STKc_phototropin_like 92 413 - -
Cla07g01009 475 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG1 10 427 - -
Cla07g01009 475 SUPERFAMILY Protein kinase-like (PK-like) 70 426 IPR011009 -
Cla07g01009 475 Gene3D Transferase(Phosphotransferase) domain 1 178 244 - -
Cla07g01009 475 Gene3D Transferase(Phosphotransferase) domain 1 289 410 - -
Cla07g01009 475 Gene3D Phosphorylase Kinase; domain 1 94 177 - -
Cla07g01009 475 ProSiteProfiles Protein kinase domain profile. 94 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01009 475 SMART serkin_6 94 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01009 475 Pfam Protein kinase domain 96 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01009 475 PANTHER FLIPPASE KINASE 1-RELATED 10 427 - -
Cla07g01009 475 MobiDBLite consensus disorder prediction 453 475 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01009 Cla-Chr7:26461792 Cla11g00263 Cla-Chr11:3058151 2.59E-116 dispersed
Cla07g01009 Cla-Chr7:26461792 Cla02g02140 Cla-Chr2:36457569 8.14E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80691 PF00069 Pkinase 7.10E-54 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01009 - - bhj:120087146 824.698