Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01010 ATGCAAGAACAAGATTCCTGTTCCGGCCCGGGTGAAGGGGTATCCATTCCGGAATTTACCTTGACTTCTCCTGATCTAGTTATCTGTGCTGCTTCTCCTGATATTCCAGTAGACAGCTACTGTGATTCACCAGAATTCTTGGATATCAAGGGTTGTAAACCTATGGAATCTTCCATGGAGCTTTCCTTTGAAAATAGCTTTTCTGGAATTGAGGTTAACTACAATCAGAGGACCCCATCTGTTAGATTTTCCAAGTTGTGTGAAACCTATGAGGAAGAACTGTCTCCAGGATCTTCCTTTGAGTTGGCTCCTCCTCCAGCTACGACTTCTCTGCAATCTGAAGAACTCCTTCAAGCTGTTAGTATCAATGCAGGTTCCTCAAATGATGCTGTCACTTTGGATGGTATGAACTATGTGGAAGACAATTGCTACAACGGTGGTGATACCATTAGGTCTGATGAAATTGAACATCCTCTATACCAAACGGCTCGTTATGGGAACTTTTATTACAATTTCTCATCATTGGAACCTGGGAATTATGTTGTTGACCTACATTTTGCTGAAATTGTATTTACCAATGGCCCTCCTGGTATGAGGGTGTTCGATGTCTATTTGCAAGACCAGAAGGTTGTTTCTGGCCTGGATATATATGCTCGTGTTGGTGGGAATAAGCCTCTCATTGTATCTGACCTTAAAGCTTCTGTAGATGTAAAAGATTTAACCGTTAGATTTGAAGGACTGATGGGGAGGCCAATTGTTTGTGGTATTTCTGTGAGGAAAGATCTTCCTTCAAATATTAAAGAAGTTGAACTGGTCGAAGATGTGGGATCTTCTCAACTAGAAAACTCAGAGATGTCCAAAGATTGTAGTGACTTGATAGTGAAAGAGAAGAAGTACATAGAGCTCCAAAAGGATTTTGAGCTCATGAAGAATGAGCTAGCAGCAGCAAAGAAAGATATGGAGGAACTTAGAAAGGAAAACAATCAAAAGGGTAGAGAATGTCAAGAAGCTTGGAAGTCTCTAAATGACCTACAAAATGAGCTCATGCGCAAGTCAATGCATGTTGGATCTCTTGCTTTTGCCATTGAGGGACAGGTGAAAGAGAAGAGCAGATGGTTTTCTTCATTGAGGGACCTTACCAGAAAAGTAAAGATTATGAAAATGGAAAACATCAAACTATCGGAGGAGGCGCTTGCATTCAAGAACTGCTTTGTGGATATGAATGAAATGACTTCTAAAATTCAGACAGCATTTAAACAGCAATTAGATTTGCAAGAAAACTTGAAGACTAAATTTGTTGAAGGAGCTAAGGAACGGAAAGAACTCTACAATAAGATGTTGGAGTTGAAAGGAAACATTAGGGTCTTTTGTCGGTGTAGGCCCTTGAATACAGAAGAAATTGCATCTGGAGCTCCAATGGTTGTTGATTTTGAGTCGGCCAAAGATGGCGAGTTGATTGTTAAGTCAAATGGGGCTCCCAGAAGGATCTTTAAATTTGATGCTGTATTTGGTCCTCAGGCAAATCAAGGAGATGTCTTTGAAGATACTGCGCCATTTGCGGCTTCAGTTCTAGATGGGTACAATGTTTGCATATTTGCATATGGCCAAACCGGAACTGGAAAAACTTTTACAATGGAGGGCACTGAAGGAGCTCGTGGAGTCAATTATAGGATTCTTGAGGAGTTGTTTCGCCTAACAAAGGAACGGCAGAAGCTACATCGATATAAAGTATCTGTTAGTGTCTTGGAAGTGTATAATGAACAAATACGAGACTTGCTAGTCTCAGGATCTCAGTCAGGGAACAGTGCAAAAAGGCTCGAAGTAAGACAAATCAGTGAAGGAATACATCATGTTCCTGGCATGGTTGAGGCCCCTGTCGACAACATGAATGAAGTTTGGGAAGTTTTACAAACGGGCAGTAACGCAAGAGCTGTTGGTTCAACCAATTGTAATGAGCACAGCAGCCGATCCCACTGCATACATTGTGTGATGGTGAAGGGGGAGAATTTGCTTAATGGGGAATGCACTAGCAGCAAACTCTGGTTGGTGGACTTGGCAGGTAGCGAGCGGATTGCTAAAGTAGAAGTACAGGGAGAACGACTCAAGGAAACACAAAATATTAACAGATCTCTTTCTGCACTTGGTGATGTAATATCTGCTCTTGCAACAAAAAGCCCTCATGTTCCTTTCAGGAACTCCAAGCTCACTCACTTGCTTCAAGATTCACTAGGGGGAGATTCGAAGACACTCATGTTCGTACAGATCAGTCCCAACGAAAATGACTTGAATGAGACTCTTTGCTCATTGAACTTTGCAAGCAGAGTAAGAGGAATCGAGTTGGGTCCTGCAAAGAGACAGCTTGATATGTCTGAATTCCTTAAATGCAAACAGATGACTGAGAAAACAAAGCAGGATATGAAGAGTAAAGATCTACAGATCAGAAAAATGGAAGAAACAATTCATGGATTAGACTTGAAGATGAAGGAAAAAGATCAAAAAAACAAAAATCTACAAGACAAGGTCAAAGAACTTGAAGCTCAACTTCTTGTTGAAAGAAAGCTAGCACGTCAGCATGTCGACACCAAAATAGCAGAGCAACAAATGAAAACCGAATCGGAAGACCACAAGCCTGCACCAGTGAGGCCTCAACTTGCTAGTAGACCATTTGGTGGTCAAAAAAATCTCCATGGATCATTCAACAGCATACTTGGAAAGGAGCAAATAAATCTCAGTCGCCCACTAACCGAAAACAACGGCTTCAAACCGTCATTTCCCTTTCCTCCAGTAGATGGTGCCATCAAGTACACTGATTCCACAGAGAAGGAGAACAATCCAGAGATGGTTGAACGATCTTTTGTGCTGCCACCAAAGAGGACAGGAAGAGCGTCCATTTGCACAATGGCCCGACGTGTACCGATGGCCCTTGCTCCTAGGAGAAACTCCCTAGTCCCTCTACGAAATATACCAAGCTCTACTCATCTCCCATCACCCATGTTGTCATTGGCACCATGTCAAGCTGACAAGATAGACGAAGGTGACGAATCAGATGACCATAACTGCTTACCTGAACAGGCACAATGCGACAGTCCTAAAGAGATAAAATATGGAGGTAAAAAGTTGAGCAACATGTTGAGACGAAGCCTTCAAAAGAAGATACAAATGAAGTCTCCAATGCAACAACATATGAGACGAGGTGGTATCAATCTAGGGATGGAGAAAGTCAGGGTCTCCATCGGAGGCCGAGGAAGGTTGGCAGCGCACAGGGTGTTGTTAGGGAATGGTAAGAGAGTAACTAAAGAAACTCAAAGTAAGAGGGAAAAGGAGAGGGGTTGGAATATGGGAACAACAGTTGGGAGAACTGTTATTTAG 3369 42.27 MQEQDSCSGPGEGVSIPEFTLTSPDLVICAASPDIPVDSYCDSPEFLDIKGCKPMESSMELSFENSFSGIEVNYNQRTPSVRFSKLCETYEEELSPGSSFELAPPPATTSLQSEELLQAVSINAGSSNDAVTLDGMNYVEDNCYNGGDTIRSDEIEHPLYQTARYGNFYYNFSSLEPGNYVVDLHFAEIVFTNGPPGMRVFDVYLQDQKVVSGLDIYARVGGNKPLIVSDLKASVDVKDLTVRFEGLMGRPIVCGISVRKDLPSNIKEVELVEDVGSSQLENSEMSKDCSDLIVKEKKYIELQKDFELMKNELAAAKKDMEELRKENNQKGRECQEAWKSLNDLQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSLRDLTRKVKIMKMENIKLSEEALAFKNCFVDMNEMTSKIQTAFKQQLDLQENLKTKFVEGAKERKELYNKMLELKGNIRVFCRCRPLNTEEIASGAPMVVDFESAKDGELIVKSNGAPRRIFKFDAVFGPQANQGDVFEDTAPFAASVLDGYNVCIFAYGQTGTGKTFTMEGTEGARGVNYRILEELFRLTKERQKLHRYKVSVSVLEVYNEQIRDLLVSGSQSGNSAKRLEVRQISEGIHHVPGMVEAPVDNMNEVWEVLQTGSNARAVGSTNCNEHSSRSHCIHCVMVKGENLLNGECTSSKLWLVDLAGSERIAKVEVQGERLKETQNINRSLSALGDVISALATKSPHVPFRNSKLTHLLQDSLGGDSKTLMFVQISPNENDLNETLCSLNFASRVRGIELGPAKRQLDMSEFLKCKQMTEKTKQDMKSKDLQIRKMEETIHGLDLKMKEKDQKNKNLQDKVKELEAQLLVERKLARQHVDTKIAEQQMKTESEDHKPAPVRPQLASRPFGGQKNLHGSFNSILGKEQINLSRPLTENNGFKPSFPFPPVDGAIKYTDSTEKENNPEMVERSFVLPPKRTGRASICTMARRVPMALAPRRNSLVPLRNIPSSTHLPSPMLSLAPCQADKIDEGDESDDHNCLPEQAQCDSPKEIKYGGKKLSNMLRRSLQKKIQMKSPMQQHMRRGGINLGMEKVRVSIGGRGRLAAHRVLLGNGKRVTKETQSKREKERGWNMGTTVGRTVI 1122
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26488452 26493969 - ClCG07G010630.1 Cla07g01010 276998

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01010 1122 SMART kinesin_4 450 786 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla07g01010 1122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 452 815 IPR027417 -
Cla07g01010 1122 PRINTS Kinesin heavy chain signature 526 547 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla07g01010 1122 PRINTS Kinesin heavy chain signature 648 665 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla07g01010 1122 PRINTS Kinesin heavy chain signature 679 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla07g01010 1122 PRINTS Kinesin heavy chain signature 728 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla07g01010 1122 PANTHER KINESIN-LIKE PROTEIN KLP-3 20 1102 - -
Cla07g01010 1122 ProSiteProfiles Kinesin motor domain profile. 452 778 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla07g01010 1122 Coils Coil 299 333 - -
Cla07g01010 1122 Pfam Kinesin motor domain 458 778 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cla07g01010 1122 Coils Coil 813 854 - -
Cla07g01010 1122 Pfam Malectin domain 120 256 IPR021720 -
Cla07g01010 1122 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 20 1102 - -
Cla07g01010 1122 CDD KISc_C_terminal 450 780 - -
Cla07g01010 1122 ProSitePatterns Kinesin motor domain signature. 678 689 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cla07g01010 1122 Gene3D Kinesin motor domain 395 780 IPR036961 -
Cla07g01010 1122 Coils Coil 376 396 - -
Cla07g01010 1122 Gene3D - 118 262 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01010 K10406 KIFC2_3; kinesin family member C2/C3 - csv:101222343 2034.61
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01798 Cla-Chr1:32910494 Cla07g01010 Cla-Chr7:26488452 1.08E-50 dispersed
Cla02g01552 Cla-Chr2:30204857 Cla07g01010 Cla-Chr7:26488452 2.77E-164 dispersed
Cla03g01570 Cla-Chr3:31475887 Cla07g01010 Cla-Chr7:26488452 3.58E-76 dispersed
Cla05g01542 Cla-Chr5:25734835 Cla07g01010 Cla-Chr7:26488452 2.89E-94 dispersed
Cla07g01010 Cla-Chr7:26488452 Cla09g02100 Cla-Chr9:38534088 2.12E-95 dispersed
Cla10g01584 Cla-Chr10:31325126 Cla07g01010 Cla-Chr7:26488452 1.88E-58 dispersed
Cla07g01010 Cla-Chr7:26488452 Cla03g00482 Cla-Chr3:5344976 3.53E-84 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g956 . . . . Bpe09g00290 . . Bma13g00898 Cmo16g00505 . . . . . . . . . . . . . . . . . . . . . . . . . Cone15ag0984 . . . . . Blo10g00686 . . . . . . . . . Cma04g00636 Cma16g00466 Car04g00595 Car16g00421 . Cpe01g00574 . . . . . . . Cla07g01010 Cam07g1087 Cec07g1159 Cco07g1137 Clacu07g1061 Cmu07g1052 Cre07g1428 . . Chy07g01045 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003005 3 2 3 3 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 2 1 2 47
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla07g01010 Cla_Chr07 FPKM 0.9724 1.21006 0.335578 0.441091 0.218166 0.0 0.0 0.450194 0.295963 0.367217