Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01015 ATGCAAAATGTTAAATTTTACACATACAAAGAGCTAAAAGTTGCAACCGAAGATTTCAGCTTGGCGAATAAAATAGGGGAGGGAGGTTTTGGTTCTGTCTACAAGGGAAAGCTAAAAGATGGAAAGATTGCTGCCATAAAAGTTCTTTCGGCTGAGTCAAGACAAGGATTGAGGGAATTCTTGACAGAAATTAATGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGATGATAATCATAGAATTCTTGTCTACAATTACCTTGAGAACAATAGCCTCGCCCAAACTCTTCTTGGCATGTTGAACGGAGGTCATGCTTTTGTTTGTTCAGTTAACTTTCAATTCAATGCTCAAGATATTGTTTCTTTTTCAGGGCGAGGTTACAGTAGCATCCAGTTTAATTGGCAAACAAGGTCTAAGATTTGCATTGGAATTGCACGTGGCCTTGCCTTCCTTCACGAGGATGTACAGCCACATATCATTCATAGAGATATCAAAGCGAGCAACATTCTTCTTGATCATGACCTCTCTCCTAAAATTTCAGATTTTGGTCTTGCAAAGCTTATTCCAGCCAGCATGACTCACGTCAGTACACGAGTGGCAGGAACAATTGGTTACCTAGCTCCAGAATATGCGATAAGAGGGCAGGTGACAAGAAAATCAGATATTTACAGTTTTGGAGTCCTCCTTGTGGAAATAGTCAGCGGGAGATGCAACACAAATACACAATTACCAATTGGAGAACAATATCTTCTTGAAAGGACATGGAATCTTTATGAGCGAGGAGAGCTCGTTCTGCTAGTTGATTTGTCCTTAAATGGCGACTTCGATGCAGAGGAGGCTTGTAAATATCTAAAGATTGGTCTACTTTGCACACAAGACAGTCCAAAACTCCGTCCATCCATGTCGACTGTGGTAAAGATGCTAACAGGAGAGATGAGTATTGAAGACAGAAAGATAACGAAACCGGGGCTGATTTCGGACTTCATGGATCTAAAAGTAAAGAATCCAGAGGAAAAGAAAGGGAATAGAGAGGGGGTGTCTTCTGATAGTCTATCCTCTGGATCAAACATCCTTGGAAATTCAACAATGTCATCTGAAGCCTCAACTGTTACATCTACAACCTTCACTGCACAATATGACAGGAATACTTTCTCATCTGGTGGTGGCGGCCTCTATCTTGAAAGGGATCCTGATATGGAATTAATAGATAATTGTAAAATCTTCTTAGCTCAGTTTTTGAGTAGGTTGTTTTTAACAGACTTGATGAAGTTGCGAATTTTCTTTGATTCCATTCTTTTCCCCGACGAGTGCACGTTTGAGATTGGAAGTTGTGTAAACCTTGAGGAACAACTGACAATTGCGATATAG 1392 40.3 MQNVKFYTYKELKVATEDFSLANKIGEGGFGSVYKGKLKDGKIAAIKVLSAESRQGLREFLTEINVISVIEHENLVQLYGCCVDDNHRILVYNYLENNSLAQTLLGMLNGGHAFVCSVNFQFNAQDIVSFSGRGYSSIQFNWQTRSKICIGIARGLAFLHEDVQPHIIHRDIKASNILLDHDLSPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRCNTNTQLPIGEQYLLERTWNLYERGELVLLVDLSLNGDFDAEEACKYLKIGLLCTQDSPKLRPSMSTVVKMLTGEMSIEDRKITKPGLISDFMDLKVKNPEEKKGNREGVSSDSLSSGSNILGNSTMSSEASTVTSTTFTAQYDRNTFSSGGGGLYLERDPDMELIDNCKIFLAQFLSRLFLTDLMKLRIFFDSILFPDECTFEIGSCVNLEEQLTIAI 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26565312 26569070 - ClCG07G010680.1 Cla07g01015 277003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01015 463 ProSiteProfiles Protein kinase domain profile. 19 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01015 463 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 115 - -
Cla07g01015 463 Gene3D Phosphorylase Kinase; domain 1 1 94 - -
Cla07g01015 463 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 136 376 - -
Cla07g01015 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Cla07g01015 463 Gene3D Transferase(Phosphotransferase) domain 1 131 331 - -
Cla07g01015 463 SUPERFAMILY Protein kinase-like (PK-like) 4 316 IPR011009 -
Cla07g01015 463 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 3 115 - -
Cla07g01015 463 SMART serkin_6 19 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01015 463 CDD STKc_IRAK 25 318 - -
Cla07g01015 463 Pfam Protein tyrosine and serine/threonine kinase 21 314 IPR001245 GO:0004672|GO:0006468
Cla07g01015 463 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 136 376 - -
Cla07g01015 463 ProSitePatterns Protein kinases ATP-binding region signature. 25 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00878 Cla-Chr4:23789824 Cla07g01015 Cla-Chr7:26565312 5.54E-123 dispersed
Cla07g00984 Cla-Chr7:26039257 Cla07g01015 Cla-Chr7:26565312 7.14E-86 dispersed
Cla07g01015 Cla-Chr7:26565312 Cla10g02086 Cla-Chr10:36548099 1.55E-107 dispersed
Cla07g01015 Cla-Chr7:26565312 Cla11g01693 Cla-Chr11:30524384 2.57E-96 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80692 PF07714 PK_Tyr_Ser-Thr 1.20E-44 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01015 - - csv:101216433 681.789