Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01024 ATGGAGTTGGCAAAGACGACGACGATGAAGACGAAGACGTTGGTTTTGTTGATTGCAGTTTCAGTTATGGTGGTTGTGATATCACAGCAATTTTGGATGCCATCTTTTGACTTGAATCATCTTTGGAGAACTGTTTCTTACCATGGCTTTACAAACAATTATCCAAGAAACAACGATAAATTCATCGATGGCCTTCTTCCTCCAGGCTTTGACCAAAAATCCTGCTTAAGCCGATACCAACTAAATCTCTACAAAAAACCCTCTCCTCACTACCCCTCTTTCCCTCTCCTCTCAAAGCTTCGTCGCTATGAAGCTCTCCACAGCCGTTGCGGCCCCAATTCTCCGTCATTCCGCCGAGCTCTCGTCGGTCTTACCTCACCCACAAACTCCACATCCTCATCCGAGGACGATTGCAAATATCTCGTCATTTTAACCCGCGATGGCCTTGGCAACCGAATCCTCGCCCTTCTCTCTGCCTTCTTCTATGCCCTAATCGCCAATCGCGTCATTCTAATCGACCAAGCCAACATTCTTGATGATCTATTCTGTGAGCCCTTTCTCGGATCCTCCTGGCTTCTTCCCTCCGATTTTCCTCTCCGTCACAAATTTGGGTCGTTCCGTCAATCCTTCCCGGGGTCTTTTGGCAATATTTTGAAGAATGGAATGTTGAAAAAAACAATCGAAGATTCACCTCCGCCTTATTTGTATCTTCATCTCTCTCATGACGCCGGCGACTATGATAAGCTCTTTTATTGCGACCGACAACAAAATCTTCTAAAGAAGGTCCCATGGTTGATTATGGAGACAAATAACTACCTGGTTCCGGGAATTTTTCTAGTTTCTTCTTTCAGAGAAGAGCTTAATAAACTCTTTCCGGTGAAGGACACTGTGTTTCACCATCTGGGACGGTACCTTTTCCACCCGACAAATGACGTTTGGGGGCTGATTTTGAGATCTTACAAGCCATATTTTTCTAGAGCAAACGAAATGGTCGGGATTCAAATCCGAATTTTTGGGTCAGAATCTGGGTCGATTCAGGACCAAATGAATCAACTTCTAGTTTGCACACAGAAGAAGAAATTACTACCTGAGCTAGAGCCATCATCACCAGTGAAGATGAACTCCACCTCTCAGAAGGTGAAAGTTGTGCTAGTGACGTCTCTAAGCGCTCAATACTCAGAAACCTTAAAGGAGATGTATTGGGATCATCCGACTGTCGACGGCGAGGTGGTGGCAGTGTACCAGCCGAGCCACGAGGGGATTCAAAGCTCCAACAGTAGGATGCACAACCGGAAGGCATTGGCGGAGATGTACCTTTTGAGCTTGAGCGACGTGTTGGTGACGAGCGATTGGTCGACATTTGGATATGTGGCACAGGGGCTGGCCGGAGTGAAGCCATGGATGCTTTACAAGCCGGAGGATAAGGTGTTTTGGGCGTTACAACAATGGCTAAAGTACAGAACGAGGAACGAGACGACTAACGACTGGCCATGCCGGCAGGCGGTGTCCATGGAGCCATGCCTCCACGTGCCGCCGGTGTGCGATTGCGATGAGATGAAAAGAAGGGATGCAGGGAATATTTTGCCGTATGTGATTCATTGTGAAGACGCAAGTTGGGGCCTTAAGTTAGGTTGA 1635 47.16 MELAKTTTMKTKTLVLLIAVSVMVVVISQQFWMPSFDLNHLWRTVSYHGFTNNYPRNNDKFIDGLLPPGFDQKSCLSRYQLNLYKKPSPHYPSFPLLSKLRRYEALHSRCGPNSPSFRRALVGLTSPTNSTSSSEDDCKYLVILTRDGLGNRILALLSAFFYALIANRVILIDQANILDDLFCEPFLGSSWLLPSDFPLRHKFGSFRQSFPGSFGNILKNGMLKKTIEDSPPPYLYLHLSHDAGDYDKLFYCDRQQNLLKKVPWLIMETNNYLVPGIFLVSSFREELNKLFPVKDTVFHHLGRYLFHPTNDVWGLILRSYKPYFSRANEMVGIQIRIFGSESGSIQDQMNQLLVCTQKKKLLPELEPSSPVKMNSTSQKVKVVLVTSLSAQYSETLKEMYWDHPTVDGEVVAVYQPSHEGIQSSNSRMHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKPEDKVFWALQQWLKYRTRNETTNDWPCRQAVSMEPCLHVPPVCDCDEMKRRDAGNILPYVIHCEDASWGLKLG 544
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26648898 26652321 - ClCG07G010780.1 Cla07g01024 277012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01024 544 PANTHER FUCOSYLTRANSFERASE 2-RELATED 480 543 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cla07g01024 544 PANTHER FUCOSYLTRANSFERASE 2-RELATED 19 475 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cla07g01024 544 Pfam Xyloglucan fucosyltransferase 50 516 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cla07g01024 544 Gene3D - 317 478 - -
Cla07g01024 544 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 19 475 - -
Cla07g01024 544 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 480 543 - -
Cla07g01024 544 Gene3D - 136 184 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g01186 Cla-Chr4:27032300 Cla07g01024 Cla-Chr7:26648898 2.53E-173 dispersed
Cla07g01024 Cla-Chr7:26648898 Cla05g02423 Cla-Chr5:35747848 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01024 K13681 - csv:101222105 942.954