Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01042 ATGAGTTCTTCAATGAAGGGAAACAATAGGATGTCCGCTGCCATGGAGAGAACGGGACAATGGATTTTCTCTCAAGACATTCCGACTGATGTCGTGGTTGCGGTCGGAGAAGCACATTTTCCTCTTCACAAGTTCATGTTGGTAGCAAAGAGCAACTACATAAGGAAATTGATAATGGAATCGACGGAGGCAGATCTAACAAGGATCGATCTGACGGACATTCCCGGCGGTGCTGAGATTTTCGAGAAGGCAGCGAAATTTTGCTACGGTGTGAACTTCGAGATCACGGTGCACAACGTGGCGGCGCTCCGATGTGCTGCAGAGTATCTGCAAATGACCGACAATTACTCCGACAACAACCTCGTCGGTCGGACCGAAGATTTCCTCTCTCAGGTGGCTCTCTCCAGCCTTTCTGGAGCCATAGTCGTTCTTAAATCTTCCCACCATCTTCTTCCCATGGCTGAAGACCTTTACATTGTCCATAGATGTGTGGATGTTATCAGTTCCAAGGCTTGCAACGAGGCGAACTTCCCAAGTCGATCACCTCCAAATTGGTGGACAGAGGAGCTAACCATAATCGACATCCAATTCTTCGCCAAAATCATAACTGCAATGAAATCTCGTGGCGCCAAAGCCTCAACTCTCTCCGCCGCTCTAATCACGTACGCCGAGAGATCTCTCCGCGATCTACTCCGCGACCACTCCGGCACCGCCCCCATCGACGATTCCGACACTAGCAGAACCAAACAACGAGAGCTCCTGGAATCAATAGTTTGTCTCTTACCTCCGGACAAAGCCGCATTCCCAATTAACTTCCTGTGCTGCCTACTCCGATCTGCGATTTACCTGAAAACAAGCATGGGGTGCAAGAACGAGGTGGAGAAGAGGATTTCGATGGTGCTGGAACATTTGAGCGTAGATGATTTGCTGGCAATGTCGTTCACGTACGACGGGGAGAGGCTGGTGGAGTTGGAAAGTATAAGGAGGATAATATTGGGATTTGTGGAAAGGGAGAAGAGCGTGGCGGTGTTTAATGCCGGAGATCTGAAAGAGGTTTGCTCTGTTTCGTTGCAAAGAGTGGGGAAGACGGTGGATGCGTATTTGGGGGAGATTGCTACTTATACCCAACTCACCATATCCAAATTTAATGGGATTGCTAATACAATACCCAAATTTGCACGCAAGGTTGATGATGATCTTTATAGAGCTATTGATATTTATCTCAAGGCACACCCAAATCTGGATGAGATCGAACGGGAGAAGGTATGCAGTGTGATGGAGCCGTTGAAGCTATCGTACGAAGCGCGAGTACATGCTTCGCAGAACAAGCGATTGCCGGTGCAAATAGTCCTTCACGCACTCTACTACGATCAGCTGAAGCTAAGAAGCGGCACGGCGGAGGAGCGGAGCGCCCACGACGCGGCCATGACAAGGAATCAAGCACAGGCAGATGTGTCATTAGTGAAAGAGAATGAGGCATTGAGGTGTGAGTTAATGAAGATGAAGCTTTACATATCTGACATGCACAAGAATTCTCAAGGAACATCTTCCATGAAAGCACCACCTTCTAGAACCAAGCCCACCTTCTTCTCCACAGTCACTAAAACACTTGGCAAATTAAATCCCTTCCGTCATGGTTCTAAAGACACTTCTAACATCGTTGACGCTGTCGACATTACGAAGCCCAGGAGGAGAAGATTGGTGTGTCTATTGGGAATGGCAATGGCGGCCACTTCCCTTTCGAACCTGCCTTCTGCTCTCTTCCATGGAAATCTGCAGAGAAATGAATTTGGGTCTGTGGGTATGCGGAGACAACCCAACAAGTATCTCAAATCCAATCTTAGAGCTCCGGTTGTGAGATGCCAATCAACTGAAGTTGATGGACCGAAAACAAAAAGAAATCTGCTCGACAATGCCAGCAATCTTCTTACCAATTTGTTAAGTGGTGGAAATTTGGGATCTATGCCGATAGCTGAAGGTGCAGTCTCTGATTTGTTCGGCCGCCCACTCTTCTTTGCACTGTATGATTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCCTTTGTTGTTGTATCAGATCCTATTGTGGCAAGATATATTCTTCGTGAAAACGCATTTGGTTATGACAAGGGAGTGCTTGCTGATATTCTAGAACCGATAATGGGTAAAGGACTAATACCAGCTGATCTTGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCATGCCTTATACTTGGAAGCTATGACCAAAGTCTTCACTGATTGTTCAGAACGATCAATACTGAAATTAGAAAAGCTTCTAGGAGAAGGTGAACTTCAGGAGGATAAAACCGTTGAGTTGGATATGGAAGCAGAGTTTTCGAGTTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTAACCAAAGAATCCCCAGTGATTAAGGCTGTATATGGAACCCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATCCCATACTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCAAGGCAGCGTAAATTCCATAGTGACCTTAAGGTTATTAATGACTGTCTTGATGGACTAATACGAAATGCAAGAGAAACCCGAGAGGAAGCCGATGTTGAGAAATTGCAGCAAAGGGACTATTTAAATCTCAAGGTGTCTCTTCTATCTTCTGAGAAAATTAATGATTCTAAAGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGGGGAGTTGATGTCGATGATCGGCAGCTTCGGGACGATCTGATGACAATGCTTATTGCCGGGCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAGTACATCAGACTTATCGTCGCAGAGACTCTTCGTTTGTTTCCTCAGCCACCATTACTAATAAGACGAGCTCTCAAACCGGATACATTGCCAGATATGTTCCCGATGCTGTTATTGTACGCTTAAGCCATGTATCCAATGGTAATTATGCAGGAGGATACAATGGTGACAAAAATGGATATGCAATACCTGCAGGAACTGACATCTTCATCTCTGTTTACAATCTCCACAGATCTCCATACTTCTGGGAAAACCCTCAAGAATTTGAACCAGAGAGATTTCAAGTAAAGAAGGCAAGCGAGGGAATTGAAGGATGGGATGGTTTTGACCCATCAAGAAGCCCTGGAGCTCTATACCCAAACGAGATTGTATCAGACTTTTCCTTCTTACCATTTGGTGGAGGACCTAGAAAATGTGTGGGGGATCAATTTGCTCTAATGGAGTCAACTATAGCACTGGCCATGTTACTGCAGAAGTTTGATGTGGAACTAAGAGGAAGCCCAGAATCTGTGGAACTTGTTACTGGGGCCACTATACATACCAAAGGTGGCTTGTGGTGCAAACTGAAAAGAAGATCACAAGTAAATTGA 3468 45.36 MSSSMKGNNRMSAAMERTGQWIFSQDIPTDVVVAVGEAHFPLHKFMLVAKSNYIRKLIMESTEADLTRIDLTDIPGGAEIFEKAAKFCYGVNFEITVHNVAALRCAAEYLQMTDNYSDNNLVGRTEDFLSQVALSSLSGAIVVLKSSHHLLPMAEDLYIVHRCVDVISSKACNEANFPSRSPPNWWTEELTIIDIQFFAKIITAMKSRGAKASTLSAALITYAERSLRDLLRDHSGTAPIDDSDTSRTKQRELLESIVCLLPPDKAAFPINFLCCLLRSAIYLKTSMGCKNEVEKRISMVLEHLSVDDLLAMSFTYDGERLVELESIRRIILGFVEREKSVAVFNAGDLKEVCSVSLQRVGKTVDAYLGEIATYTQLTISKFNGIANTIPKFARKVDDDLYRAIDIYLKAHPNLDEIEREKVCSVMEPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGTAEERSAHDAAMTRNQAQADVSLVKENEALRCELMKMKLYISDMHKNSQGTSSMKAPPSRTKPTFFSTVTKTLGKLNPFRHGSKDTSNIVDAVDITKPRRRRLVCLLGMAMAATSLSNLPSALFHGNLQRNEFGSVGMRRQPNKYLKSNLRAPVVRCQSTEVDGPKTKRNLLDNASNLLTNLLSGGNLGSMPIAEGAVSDLFGRPLFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMTKVFTDCSERSILKLEKLLGEGELQEDKTVELDMEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYLNLKVSLLSSEKINDSKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQVHQTYRRRDSSFVSSATITNKTSSQTGYIARYVPDAVIVRLSHVSNGNYAGGYNGDKNGYAIPAGTDIFISVYNLHRSPYFWENPQEFEPERFQVKKASEGIEGWDGFDPSRSPGALYPNEIVSDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELRGSPESVELVTGATIHTKGGLWCKLKRRSQVN 1155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26882960 26896604 - ClCG07G010970.2 Cla07g01042 277030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01042 1155 PRINTS E-class P450 group I signature 678 697 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01042 1155 PRINTS E-class P450 group I signature 1098 1121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01042 1155 PRINTS E-class P450 group I signature 931 948 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01042 1155 PRINTS E-class P450 group I signature 1088 1098 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01042 1155 Pfam BTB/POZ domain 25 113 IPR000210 GO:0005515
Cla07g01042 1155 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Cla07g01042 1155 ProSiteProfiles NPH3 domain profile. 184 460 IPR027356 -
Cla07g01042 1155 Pfam Cytochrome P450 1018 1142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01042 1155 Pfam Cytochrome P450 678 962 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01042 1155 SMART BTB_4 29 133 IPR000210 GO:0005515
Cla07g01042 1155 PANTHER ROOT PHOTOTROPISM PROTEIN 2 14 567 - -
Cla07g01042 1155 PANTHER OS12G0117600 PROTEIN 14 567 IPR043454 -
Cla07g01042 1155 SUPERFAMILY Cytochrome P450 666 1151 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01042 1155 SUPERFAMILY POZ domain 12 128 IPR011333 -
Cla07g01042 1155 Gene3D Potassium Channel Kv1.1; Chain A 3 129 IPR011333 -
Cla07g01042 1155 Pfam NPH3 family 184 435 IPR027356 -
Cla07g01042 1155 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1091 1100 IPR017972 GO:0005506|GO:0016705
Cla07g01042 1155 PRINTS P450 superfamily signature 942 959 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01042 1155 PRINTS P450 superfamily signature 1098 1109 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01042 1155 PRINTS P450 superfamily signature 1089 1098 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01042 1155 Gene3D Cytochrome P450 655 1155 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01042 Cla-Chr7:26882960 Cla10g00773 Cla-Chr10:14294133 1.88E-112 dispersed
Cla07g01042 Cla-Chr7:26882960 Cla05g02148 Cla-Chr5:33093325 1.32E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01042 - - csv:101210042 988.793