Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01042 | ATGAGTTCTTCAATGAAGGGAAACAATAGGATGTCCGCTGCCATGGAGAGAACGGGACAATGGATTTTCTCTCAAGACATTCCGACTGATGTCGTGGTTGCGGTCGGAGAAGCACATTTTCCTCTTCACAAGTTCATGTTGGTAGCAAAGAGCAACTACATAAGGAAATTGATAATGGAATCGACGGAGGCAGATCTAACAAGGATCGATCTGACGGACATTCCCGGCGGTGCTGAGATTTTCGAGAAGGCAGCGAAATTTTGCTACGGTGTGAACTTCGAGATCACGGTGCACAACGTGGCGGCGCTCCGATGTGCTGCAGAGTATCTGCAAATGACCGACAATTACTCCGACAACAACCTCGTCGGTCGGACCGAAGATTTCCTCTCTCAGGTGGCTCTCTCCAGCCTTTCTGGAGCCATAGTCGTTCTTAAATCTTCCCACCATCTTCTTCCCATGGCTGAAGACCTTTACATTGTCCATAGATGTGTGGATGTTATCAGTTCCAAGGCTTGCAACGAGGCGAACTTCCCAAGTCGATCACCTCCAAATTGGTGGACAGAGGAGCTAACCATAATCGACATCCAATTCTTCGCCAAAATCATAACTGCAATGAAATCTCGTGGCGCCAAAGCCTCAACTCTCTCCGCCGCTCTAATCACGTACGCCGAGAGATCTCTCCGCGATCTACTCCGCGACCACTCCGGCACCGCCCCCATCGACGATTCCGACACTAGCAGAACCAAACAACGAGAGCTCCTGGAATCAATAGTTTGTCTCTTACCTCCGGACAAAGCCGCATTCCCAATTAACTTCCTGTGCTGCCTACTCCGATCTGCGATTTACCTGAAAACAAGCATGGGGTGCAAGAACGAGGTGGAGAAGAGGATTTCGATGGTGCTGGAACATTTGAGCGTAGATGATTTGCTGGCAATGTCGTTCACGTACGACGGGGAGAGGCTGGTGGAGTTGGAAAGTATAAGGAGGATAATATTGGGATTTGTGGAAAGGGAGAAGAGCGTGGCGGTGTTTAATGCCGGAGATCTGAAAGAGGTTTGCTCTGTTTCGTTGCAAAGAGTGGGGAAGACGGTGGATGCGTATTTGGGGGAGATTGCTACTTATACCCAACTCACCATATCCAAATTTAATGGGATTGCTAATACAATACCCAAATTTGCACGCAAGGTTGATGATGATCTTTATAGAGCTATTGATATTTATCTCAAGGCACACCCAAATCTGGATGAGATCGAACGGGAGAAGGTATGCAGTGTGATGGAGCCGTTGAAGCTATCGTACGAAGCGCGAGTACATGCTTCGCAGAACAAGCGATTGCCGGTGCAAATAGTCCTTCACGCACTCTACTACGATCAGCTGAAGCTAAGAAGCGGCACGGCGGAGGAGCGGAGCGCCCACGACGCGGCCATGACAAGGAATCAAGCACAGGCAGATGTGTCATTAGTGAAAGAGAATGAGGCATTGAGGTGTGAGTTAATGAAGATGAAGCTTTACATATCTGACATGCACAAGAATTCTCAAGGAACATCTTCCATGAAAGCACCACCTTCTAGAACCAAGCCCACCTTCTTCTCCACAGTCACTAAAACACTTGGCAAATTAAATCCCTTCCGTCATGGTTCTAAAGACACTTCTAACATCGTTGACGCTGTCGACATTACGAAGCCCAGGAGGAGAAGATTGGTGTGTCTATTGGGAATGGCAATGGCGGCCACTTCCCTTTCGAACCTGCCTTCTGCTCTCTTCCATGGAAATCTGCAGAGAAATGAATTTGGGTCTGTGGGTATGCGGAGACAACCCAACAAGTATCTCAAATCCAATCTTAGAGCTCCGGTTGTGAGATGCCAATCAACTGAAGTTGATGGACCGAAAACAAAAAGAAATCTGCTCGACAATGCCAGCAATCTTCTTACCAATTTGTTAAGTGGTGGAAATTTGGGATCTATGCCGATAGCTGAAGGTGCAGTCTCTGATTTGTTCGGCCGCCCACTCTTCTTTGCACTGTATGATTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCCTTTGTTGTTGTATCAGATCCTATTGTGGCAAGATATATTCTTCGTGAAAACGCATTTGGTTATGACAAGGGAGTGCTTGCTGATATTCTAGAACCGATAATGGGTAAAGGACTAATACCAGCTGATCTTGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCATGCCTTATACTTGGAAGCTATGACCAAAGTCTTCACTGATTGTTCAGAACGATCAATACTGAAATTAGAAAAGCTTCTAGGAGAAGGTGAACTTCAGGAGGATAAAACCGTTGAGTTGGATATGGAAGCAGAGTTTTCGAGTTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTAACCAAAGAATCCCCAGTGATTAAGGCTGTATATGGAACCCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATCCCATACTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCAAGGCAGCGTAAATTCCATAGTGACCTTAAGGTTATTAATGACTGTCTTGATGGACTAATACGAAATGCAAGAGAAACCCGAGAGGAAGCCGATGTTGAGAAATTGCAGCAAAGGGACTATTTAAATCTCAAGGTGTCTCTTCTATCTTCTGAGAAAATTAATGATTCTAAAGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGGGGAGTTGATGTCGATGATCGGCAGCTTCGGGACGATCTGATGACAATGCTTATTGCCGGGCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAGTACATCAGACTTATCGTCGCAGAGACTCTTCGTTTGTTTCCTCAGCCACCATTACTAATAAGACGAGCTCTCAAACCGGATACATTGCCAGATATGTTCCCGATGCTGTTATTGTACGCTTAAGCCATGTATCCAATGGTAATTATGCAGGAGGATACAATGGTGACAAAAATGGATATGCAATACCTGCAGGAACTGACATCTTCATCTCTGTTTACAATCTCCACAGATCTCCATACTTCTGGGAAAACCCTCAAGAATTTGAACCAGAGAGATTTCAAGTAAAGAAGGCAAGCGAGGGAATTGAAGGATGGGATGGTTTTGACCCATCAAGAAGCCCTGGAGCTCTATACCCAAACGAGATTGTATCAGACTTTTCCTTCTTACCATTTGGTGGAGGACCTAGAAAATGTGTGGGGGATCAATTTGCTCTAATGGAGTCAACTATAGCACTGGCCATGTTACTGCAGAAGTTTGATGTGGAACTAAGAGGAAGCCCAGAATCTGTGGAACTTGTTACTGGGGCCACTATACATACCAAAGGTGGCTTGTGGTGCAAACTGAAAAGAAGATCACAAGTAAATTGA | 3468 | 45.36 | MSSSMKGNNRMSAAMERTGQWIFSQDIPTDVVVAVGEAHFPLHKFMLVAKSNYIRKLIMESTEADLTRIDLTDIPGGAEIFEKAAKFCYGVNFEITVHNVAALRCAAEYLQMTDNYSDNNLVGRTEDFLSQVALSSLSGAIVVLKSSHHLLPMAEDLYIVHRCVDVISSKACNEANFPSRSPPNWWTEELTIIDIQFFAKIITAMKSRGAKASTLSAALITYAERSLRDLLRDHSGTAPIDDSDTSRTKQRELLESIVCLLPPDKAAFPINFLCCLLRSAIYLKTSMGCKNEVEKRISMVLEHLSVDDLLAMSFTYDGERLVELESIRRIILGFVEREKSVAVFNAGDLKEVCSVSLQRVGKTVDAYLGEIATYTQLTISKFNGIANTIPKFARKVDDDLYRAIDIYLKAHPNLDEIEREKVCSVMEPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGTAEERSAHDAAMTRNQAQADVSLVKENEALRCELMKMKLYISDMHKNSQGTSSMKAPPSRTKPTFFSTVTKTLGKLNPFRHGSKDTSNIVDAVDITKPRRRRLVCLLGMAMAATSLSNLPSALFHGNLQRNEFGSVGMRRQPNKYLKSNLRAPVVRCQSTEVDGPKTKRNLLDNASNLLTNLLSGGNLGSMPIAEGAVSDLFGRPLFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMTKVFTDCSERSILKLEKLLGEGELQEDKTVELDMEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYLNLKVSLLSSEKINDSKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQVHQTYRRRDSSFVSSATITNKTSSQTGYIARYVPDAVIVRLSHVSNGNYAGGYNGDKNGYAIPAGTDIFISVYNLHRSPYFWENPQEFEPERFQVKKASEGIEGWDGFDPSRSPGALYPNEIVSDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELRGSPESVELVTGATIHTKGGLWCKLKRRSQVN | 1155 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 26882960 | 26896604 | - | ClCG07G010970.2 | Cla07g01042 | 277030 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01042 | 1155 | PRINTS | E-class P450 group I signature | 678 | 697 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla07g01042 | 1155 | PRINTS | E-class P450 group I signature | 1098 | 1121 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla07g01042 | 1155 | PRINTS | E-class P450 group I signature | 931 | 948 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla07g01042 | 1155 | PRINTS | E-class P450 group I signature | 1088 | 1098 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla07g01042 | 1155 | Pfam | BTB/POZ domain | 25 | 113 | IPR000210 | GO:0005515 | |
Cla07g01042 | 1155 | ProSiteProfiles | BTB domain profile. | 29 | 97 | IPR000210 | GO:0005515 | |
Cla07g01042 | 1155 | ProSiteProfiles | NPH3 domain profile. | 184 | 460 | IPR027356 | - | |
Cla07g01042 | 1155 | Pfam | Cytochrome P450 | 1018 | 1142 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla07g01042 | 1155 | Pfam | Cytochrome P450 | 678 | 962 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla07g01042 | 1155 | SMART | BTB_4 | 29 | 133 | IPR000210 | GO:0005515 | |
Cla07g01042 | 1155 | PANTHER | ROOT PHOTOTROPISM PROTEIN 2 | 14 | 567 | - | - | |
Cla07g01042 | 1155 | PANTHER | OS12G0117600 PROTEIN | 14 | 567 | IPR043454 | - | |
Cla07g01042 | 1155 | SUPERFAMILY | Cytochrome P450 | 666 | 1151 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla07g01042 | 1155 | SUPERFAMILY | POZ domain | 12 | 128 | IPR011333 | - | |
Cla07g01042 | 1155 | Gene3D | Potassium Channel Kv1.1; Chain A | 3 | 129 | IPR011333 | - | |
Cla07g01042 | 1155 | Pfam | NPH3 family | 184 | 435 | IPR027356 | - | |
Cla07g01042 | 1155 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 1091 | 1100 | IPR017972 | GO:0005506|GO:0016705 | |
Cla07g01042 | 1155 | PRINTS | P450 superfamily signature | 942 | 959 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla07g01042 | 1155 | PRINTS | P450 superfamily signature | 1098 | 1109 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla07g01042 | 1155 | PRINTS | P450 superfamily signature | 1089 | 1098 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cla07g01042 | 1155 | Gene3D | Cytochrome P450 | 655 | 1155 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g01042 | Cla-Chr7:26882960 | Cla10g00773 | Cla-Chr10:14294133 | 1.88E-112 | dispersed | |
Cla07g01042 | Cla-Chr7:26882960 | Cla05g02148 | Cla-Chr5:33093325 | 1.32E-93 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01042 | - | - | csv:101210042 | 988.793 |