Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01055 ATGTTCGCCTTCTCCGTTCTCCTCCTCCTCCTCGTCTTCCTTCTTTTCTTTCATTTTCTTTTCAAATTCTCCGCCCCCGCTCTTCGGAAGCTTCCCCTTCCGCCGGGCTCAATGGGCTGGCCCTATTTGGGTGAGACCCTCCAACTTTACTCTCAAGATCCCAATGTCTTCTTTGCCTCAAAAAAGAAGAGATATGGTCCAATTTTCAAGTCCCATATATTGGGTTATCCTTGTGTGATGGTTTCTAGTCCTGAAGCTGCTAAGTTTGTGTTGGTCACTAAAGCTCATCTCTTTAAGCCTACATTTCCCGCTAGTAAAGAGAGGATGTTGGGCAAAAATGCTATCTTCTTTCATCAAGGAGATTACCATGCTAAATTGAGGCGCCTCGTCCTCCGAACTTTCATGCCCGAGGCAATTAGAAACATCGTCCCCAGCATCGAATCCATTGCTAAAAACACTGTTCAATCATGGGATGGACAATTGATCAACACCTTTCAAGAAATGAAGATGTTCGCATTCGAGGTTTCGTTACTTTCGATATTCGGAAAAGACGAAGCTCTTTACTTCGAAGACCTCAAACGATGCTACTACATTCTGGAAAAAGGCTACAATTCTATGCCGATTAACCTACCCGGAACACTCTTCCACAAGGCCATGAAAGCAAGGAAAGAGCTAGCACATATCTTAAACAAGATCCTGTCAACCAGGAGGGAAATGAAGCGCGACCACAACGACCTCCTCGGATCTTTCATGGGTGAAAAGGAAGGCCTCACCGATGAACAGATTGCCGATAACGTCATCGGTCTCATCTTCGCTGCTCGGGACACGACCGCCAGTGTTCTAACATGGATCTTGAAGTACCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTCACTGCTGAACAAGAAGCAATAATGAAACAAAAACAGAGTGGTGATGATAATCTCACCTGGGCTGACACCAAAAACATGCCAATCACTTCAAGGGTTATTCAAGAAACCCTAAGAATGGCTTCGGTTCTATCATTTACTTTCAGAGAAGCAGTGGAAGATGTTGAATTTGATGGATATTTGATTCCAAAAGGATGGAAAGTTTTGCCTCTTTTCAGAAACATTCATCACAGCCCAGAAAATTTCCCTCAGCCTGACAAATTTGATCCTACAAGATTTGAGGTTGCTCAAAAACCCAATACCTACATGCCATTTGGCAATGGGACCCACTCTTGTCCAGGAAATGAATTAGCCAAGCTAGAGATGCTGGTTTTACTCCATCATTTAACCACCAAGTACAGGTGGAATGTAGTTGGTGCACAAGAAGGGATTCAATATGGTCCTTTTGCCCTTCCTCTCAATGGCCTTCCAATAAAAATATTTCTCAAGAAGTAA 1386 43.65 MFAFSVLLLLLVFLLFFHFLFKFSAPALRKLPLPPGSMGWPYLGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMVSSPEAAKFVLVTKAHLFKPTFPASKERMLGKNAIFFHQGDYHAKLRRLVLRTFMPEAIRNIVPSIESIAKNTVQSWDGQLINTFQEMKMFAFEVSLLSIFGKDEALYFEDLKRCYYILEKGYNSMPINLPGTLFHKAMKARKELAHILNKILSTRREMKRDHNDLLGSFMGEKEGLTDEQIADNVIGLIFAARDTTASVLTWILKYLGENPSVLQAVTAEQEAIMKQKQSGDDNLTWADTKNMPITSRVIQETLRMASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHHSPENFPQPDKFDPTRFEVAQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTKYRWNVVGAQEGIQYGPFALPLNGLPIKIFLKK 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27115215 27117642 + ClCG07G011110.1 Cla07g01055 277043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01055 461 PANTHER CYTOCHROME P450 26 11 458 - -
Cla07g01055 461 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PRINTS P450 superfamily signature 329 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PRINTS P450 superfamily signature 400 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PRINTS E-class P450 group I signature 281 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PRINTS E-class P450 group I signature 328 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PRINTS E-class P450 group I signature 399 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PRINTS E-class P450 group I signature 409 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 SUPERFAMILY Cytochrome P450 28 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 402 411 IPR017972 GO:0005506|GO:0016705
Cla07g01055 461 Pfam Cytochrome P450 34 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 Gene3D Cytochrome P450 24 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01055 461 PANTHER ABSCISIC ACID 8'-HYDROXYLASE CYP707A2 11 458 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00128 Cla-Chr3:1278079 Cla07g01055 Cla-Chr7:27115215 0 dispersed
Cla07g01055 Cla-Chr7:27115215 Cla08g01571 Cla-Chr8:28354854 4.08E-101 dispersed
Cla07g01055 Cla-Chr7:27115215 Cla05g02039 Cla-Chr5:32102232 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01055 K09843 - csv:101212508 859.366